The archive of the the rice proteogenomics database (OryzaPG-DB)
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PGFeval
fasta
gff3
Genes.txt
Oryza-PG-Database-(v1.1).zip
Ppetides.txt
Proteins.txt
README.md
SampleGenes.txt
Transcripts.txt
Updated_Genes.txt
cdna.txt
oryza-PG-header.png

README.md

The rice proteogenomics database (OryzaPG-DB) archive

Oryza-PG database header

OryzaPG database is the rice proteogenomics database developed by The Rice Proteogenomics Project (RPP), in the Institute for Advanced Biosciences (IAB), Keio University. The most up to date version of the database contains the proteome and phosphoproteome of the rice undifferentiated cultured cells, the corresponding cDNA, Transcript an d Genome sequences, the novel proteogenomics features and the updated gene models annotation.

OryzaPG database was online from September 2010 to May 2017. At May 2017 the OryzaPG database servers were retired. This repository provides an archive to the most recent version of OryzaPG database. The whole database can also be downloaded as a single compressed file from here.

For more information about OryzaPG database, please see the OryzaPG database publications:

For inquiries about OryzaPG database, please contact