diff --git a/_sources/readme.md b/_sources/readme.md
index 15d29a7..d972519 100644
--- a/_sources/readme.md
+++ b/_sources/readme.md
@@ -1,6 +1,6 @@
 # NFDI4BioImage Training Materials
 
-This Jupyter Book contains 256 links to training materials in the context Research Data Management for Bioimaging / Microscopy Data and Bio-image Analysis and has been updated 2024-06-19.
+This Jupyter Book contains 256 links to training materials in the context Research Data Management for Bioimaging / Microscopy Data and Bio-image Analysis and has been updated 2024-06-28.
 
 This is a **preliminary** / **experimental** search index allowing us to explore how such a database could look like. We follow the principle [_release early, release often_](https://en.wikipedia.org/wiki/Release_early,_release_often) and aim at having a functional prototype of the search index at any time. We will use this resource to 
 * explore what kind of meta-data we need to collect for training materials
diff --git a/authors/christian_tischer.html b/authors/christian_tischer.html
index e16cf68..6eaf18e 100644
--- a/authors/christian_tischer.html
+++ b/authors/christian_tischer.html
@@ -1318,7 +1318,7 @@ <h2>i2k-2020-s3-zarr-workshop<a class="headerlink" href="#i2k-2020-s3-zarr-works
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/constantin_pape.html b/authors/constantin_pape.html
index 4944f3c..279c1e1 100644
--- a/authors/constantin_pape.html
+++ b/authors/constantin_pape.html
@@ -1221,7 +1221,7 @@ <h2>i2k-2020-s3-zarr-workshop<a class="headerlink" href="#i2k-2020-s3-zarr-works
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/et_al..html b/authors/et_al..html
index df8918b..1eb2327 100644
--- a/authors/et_al..html
+++ b/authors/et_al..html
@@ -1241,7 +1241,7 @@ <h2>NEUBIAS Bioimage Analyst School 2020<a class="headerlink" href="#neubias-bio
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/guillaume_witz.html b/authors/guillaume_witz.html
index 822a50a..f0d6de9 100644
--- a/authors/guillaume_witz.html
+++ b/authors/guillaume_witz.html
@@ -1263,7 +1263,7 @@ <h2>numpy pandas course<a class="headerlink" href="#numpy-pandas-course" title="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/josh_moore.html b/authors/josh_moore.html
index 569e388..b48f3b7 100644
--- a/authors/josh_moore.html
+++ b/authors/josh_moore.html
@@ -1244,7 +1244,7 @@ <h2>[N4BI AHM] Welcome to BioImage Town<a class="headerlink" href="#n4bi-ahm-wel
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/kota_miura.html b/authors/kota_miura.html
index 027051b..b0c9506 100644
--- a/authors/kota_miura.html
+++ b/authors/kota_miura.html
@@ -1320,7 +1320,7 @@ <h2>What is Bioimage Analysis? An Introduction<a class="headerlink" href="#what-
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/mara_lampert.html b/authors/mara_lampert.html
index 41bb7a4..80c71bc 100644
--- a/authors/mara_lampert.html
+++ b/authors/mara_lampert.html
@@ -1219,7 +1219,7 @@ <h2>Tracking in napari<a class="headerlink" href="#tracking-in-napari" title="Pe
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/martin_weigert.html b/authors/martin_weigert.html
index 2609b4c..100aec1 100644
--- a/authors/martin_weigert.html
+++ b/authors/martin_weigert.html
@@ -1263,7 +1263,7 @@ <h2>Neubias Academy 2020: Introduction to Nuclei Segmentation with StarDist<a cl
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/readme.html b/authors/readme.html
index e8e96d8..b93d8b5 100644
--- a/authors/readme.html
+++ b/authors/readme.html
@@ -1107,7 +1107,7 @@ <h2> Contents </h2>
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/robert_haase.html b/authors/robert_haase.html
index 2d32864..1e0174f 100644
--- a/authors/robert_haase.html
+++ b/authors/robert_haase.html
@@ -1813,7 +1813,7 @@ <h2>Working with pixels<a class="headerlink" href="#working-with-pixels" title="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/authors/susanne_kunis.html b/authors/susanne_kunis.html
index 3db335c..39388e9 100644
--- a/authors/susanne_kunis.html
+++ b/authors/susanne_kunis.html
@@ -1223,7 +1223,7 @@ <h2>Structuring of Data and Metadata in Bioimaging: Concepts and technical Solut
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/blog.html b/content_types/blog.html
index bd97a6d..16d2bfd 100644
--- a/content_types/blog.html
+++ b/content_types/blog.html
@@ -1406,7 +1406,7 @@ <h2>Tracking in napari<a class="headerlink" href="#tracking-in-napari" title="Pe
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/book.html b/content_types/book.html
index b6aa785..88f5847 100644
--- a/content_types/book.html
+++ b/content_types/book.html
@@ -1410,7 +1410,7 @@ <h2>Train-the-Trainer Concept on Research Data Management<a class="headerlink" h
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/code.html b/content_types/code.html
index 3c32d48..604a41c 100644
--- a/content_types/code.html
+++ b/content_types/code.html
@@ -1317,7 +1317,7 @@ <h2>quantixed/TheDigitalCell: First complete code set<a class="headerlink" href=
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/collection.html b/content_types/collection.html
index f86d63b..d123dba 100644
--- a/content_types/collection.html
+++ b/content_types/collection.html
@@ -2058,7 +2058,7 @@ <h2>microlist<a class="headerlink" href="#microlist" title="Permalink to this he
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/data.html b/content_types/data.html
index b077eb7..2ca38d2 100644
--- a/content_types/data.html
+++ b/content_types/data.html
@@ -1269,7 +1269,7 @@ <h2>Image Data Resources<a class="headerlink" href="#image-data-resources" title
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/document.html b/content_types/document.html
index 5130fb5..1bc68c3 100644
--- a/content_types/document.html
+++ b/content_types/document.html
@@ -1216,7 +1216,7 @@ <h2>OMERO walkthrough for facility managers<a class="headerlink" href="#omero-wa
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/documentation.html b/content_types/documentation.html
index 222a571..1cbb9cc 100644
--- a/content_types/documentation.html
+++ b/content_types/documentation.html
@@ -1391,7 +1391,7 @@ <h2>Snakemake Documentation<a class="headerlink" href="#snakemake-documentation"
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/event.html b/content_types/event.html
index 996b4da..b1fa4b6 100644
--- a/content_types/event.html
+++ b/content_types/event.html
@@ -1247,7 +1247,7 @@ <h2>TESS Event database<a class="headerlink" href="#tess-event-database" title="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/notebook.html b/content_types/notebook.html
index 9374008..6c948d7 100644
--- a/content_types/notebook.html
+++ b/content_types/notebook.html
@@ -2020,7 +2020,7 @@ <h2>numpy pandas course<a class="headerlink" href="#numpy-pandas-course" title="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/publication.html b/content_types/publication.html
index f2f790d..b54ef8b 100644
--- a/content_types/publication.html
+++ b/content_types/publication.html
@@ -1896,7 +1896,7 @@ <h2>Understanding metric-related pitfalls in image analysis validation<a class="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/readme.html b/content_types/readme.html
index 75fe6f9..4598a0e 100644
--- a/content_types/readme.html
+++ b/content_types/readme.html
@@ -1107,7 +1107,7 @@ <h2> Contents </h2>
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/slide.html b/content_types/slide.html
index 1f8b961..d44a512 100644
--- a/content_types/slide.html
+++ b/content_types/slide.html
@@ -1888,7 +1888,7 @@ <h2>ilastik: interactive machine learning for (bio)image analysis<a class="heade
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/slides.html b/content_types/slides.html
index d8780f6..422f4a5 100644
--- a/content_types/slides.html
+++ b/content_types/slides.html
@@ -1380,7 +1380,7 @@ <h2>[N4BI AHM] Welcome to BioImage Town<a class="headerlink" href="#n4bi-ahm-wel
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/tutorial.html b/content_types/tutorial.html
index 946099d..1a89a20 100644
--- a/content_types/tutorial.html
+++ b/content_types/tutorial.html
@@ -1422,7 +1422,7 @@ <h2>Teaching ImageJ FIJI<a class="headerlink" href="#teaching-imagej-fiji" title
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/content_types/video.html b/content_types/video.html
index 6b60784..454f556 100644
--- a/content_types/video.html
+++ b/content_types/video.html
@@ -1487,7 +1487,7 @@ <h2>arivis Vision4D Tutorials<a class="headerlink" href="#arivis-vision4d-tutori
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/contributing/format.html b/contributing/format.html
index cb8f2af..503a062 100644
--- a/contributing/format.html
+++ b/contributing/format.html
@@ -1117,7 +1117,7 @@ <h1>YML format<a class="headerlink" href="#yml-format" title="Permalink to this
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/contributing/index.html b/contributing/index.html
index 9bd2466..d565f77 100644
--- a/contributing/index.html
+++ b/contributing/index.html
@@ -1251,7 +1251,7 @@ <h2>Step-by-step tutorial<a class="headerlink" href="#step-by-step-tutorial" tit
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/genindex.html b/genindex.html
index f793299..01130fd 100644
--- a/genindex.html
+++ b/genindex.html
@@ -1022,7 +1022,7 @@ <h1 id="index">Index</h1>
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/imprint.html b/imprint.html
index 9f98986..d829a0d 100644
--- a/imprint.html
+++ b/imprint.html
@@ -1273,7 +1273,7 @@ <h2>Datenschutz<a class="headerlink" href="#datenschutz" title="Permalink to thi
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/licenses/all_rights_reserved.html b/licenses/all_rights_reserved.html
index c5050f7..7cf3f1f 100644
--- a/licenses/all_rights_reserved.html
+++ b/licenses/all_rights_reserved.html
@@ -1391,7 +1391,7 @@ <h2>microlist<a class="headerlink" href="#microlist" title="Permalink to this he
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/licenses/bsd-3-clause.html b/licenses/bsd-3-clause.html
index ecd389c..664fec4 100644
--- a/licenses/bsd-3-clause.html
+++ b/licenses/bsd-3-clause.html
@@ -1244,7 +1244,7 @@ <h2>numpy pandas course<a class="headerlink" href="#numpy-pandas-course" title="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/licenses/bsd_3-clause.html b/licenses/bsd_3-clause.html
index 62cff36..b5c58f3 100644
--- a/licenses/bsd_3-clause.html
+++ b/licenses/bsd_3-clause.html
@@ -1298,7 +1298,7 @@ <h2>Working with pixels<a class="headerlink" href="#working-with-pixels" title="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/licenses/cc-by-4.0.html b/licenses/cc-by-4.0.html
index 0e1ef16..2b2b3b1 100644
--- a/licenses/cc-by-4.0.html
+++ b/licenses/cc-by-4.0.html
@@ -2257,7 +2257,7 @@ <h2>ilastik: interactive machine learning for (bio)image analysis<a class="heade
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/licenses/cc-by_4.0.html b/licenses/cc-by_4.0.html
index 02ea925..ae5a0a7 100644
--- a/licenses/cc-by_4.0.html
+++ b/licenses/cc-by_4.0.html
@@ -1246,7 +1246,7 @@ <h2>Open Science, Sharing &amp; Licensing<a class="headerlink" href="#open-scien
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/licenses/mit.html b/licenses/mit.html
index 70cc6e5..cc9d7bc 100644
--- a/licenses/mit.html
+++ b/licenses/mit.html
@@ -1368,7 +1368,7 @@ <h2>ZeroCostDL4Mic: exploiting Google Colab to develop a free and open-source to
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/licenses/readme.html b/licenses/readme.html
index 74e2865..cb90b70 100644
--- a/licenses/readme.html
+++ b/licenses/readme.html
@@ -1107,7 +1107,7 @@ <h2> Contents </h2>
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/licenses/unknown.html b/licenses/unknown.html
index ad4371b..87cdc9a 100644
--- a/licenses/unknown.html
+++ b/licenses/unknown.html
@@ -2232,7 +2232,7 @@ <h2>i2k-2020-s3-zarr-workshop<a class="headerlink" href="#i2k-2020-s3-zarr-works
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/readme.html b/readme.html
index a1c29b5..8ecddeb 100644
--- a/readme.html
+++ b/readme.html
@@ -1057,7 +1057,7 @@ <h2> Contents </h2>
               
   <section class="tex2jax_ignore mathjax_ignore" id="nfdi4bioimage-training-materials">
 <h1>NFDI4BioImage Training Materials<a class="headerlink" href="#nfdi4bioimage-training-materials" title="Permalink to this heading">#</a></h1>
-<p>This Jupyter Book contains 256 links to training materials in the context Research Data Management for Bioimaging / Microscopy Data and Bio-image Analysis and has been updated 2024-06-19.</p>
+<p>This Jupyter Book contains 256 links to training materials in the context Research Data Management for Bioimaging / Microscopy Data and Bio-image Analysis and has been updated 2024-06-28.</p>
 <p>This is a <strong>preliminary</strong> / <strong>experimental</strong> search index allowing us to explore how such a database could look like. We follow the principle <a class="reference external" href="https://en.wikipedia.org/wiki/Release_early,_release_often"><em>release early, release often</em></a> and aim at having a functional prototype of the search index at any time. We will use this resource to</p>
 <ul class="simple">
 <li><p>explore what kind of meta-data we need to collect for training materials</p></li>
@@ -1198,7 +1198,7 @@ <h2>Acknowledgements<a class="headerlink" href="#acknowledgements" title="Permal
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/search.html b/search.html
index 6656ace..5114fc0 100644
--- a/search.html
+++ b/search.html
@@ -1032,7 +1032,7 @@ <h1>Search</h1>
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/searchindex.js b/searchindex.js
index 3fa0daa..07ef0c9 100644
--- a/searchindex.js
+++ b/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"docnames": ["authors/christian_tischer", "authors/constantin_pape", "authors/et_al.", "authors/guillaume_witz", "authors/josh_moore", "authors/kota_miura", "authors/mara_lampert", "authors/martin_weigert", "authors/readme", "authors/robert_haase", "authors/susanne_kunis", "content_types/blog", "content_types/book", "content_types/code", "content_types/collection", "content_types/data", "content_types/document", "content_types/documentation", "content_types/event", "content_types/notebook", "content_types/publication", "content_types/readme", "content_types/slide", "content_types/slides", "content_types/tutorial", "content_types/video", "contributing/format", "contributing/index", "imprint", "licenses/all_rights_reserved", "licenses/bsd-3-clause", "licenses/bsd_3-clause", "licenses/cc-by-4.0", "licenses/cc-by_4.0", "licenses/mit", "licenses/readme", "licenses/unknown", "readme", "tags/artificial_intelligence", "tags/bioimage_analysis", "tags/deep_learning", "tags/fair-principles", "tags/imagej", "tags/meta_data", "tags/napari", "tags/neubias", "tags/nfdi4bioimage", "tags/omero", "tags/python", "tags/readme", "tags/research_data_management", "tags/sharing", "tags/workflow_engine"], "filenames": ["authors/christian_tischer.md", "authors/constantin_pape.md", "authors/et_al..md", "authors/guillaume_witz.md", "authors/josh_moore.md", "authors/kota_miura.md", "authors/mara_lampert.md", "authors/martin_weigert.md", "authors/readme.md", "authors/robert_haase.md", "authors/susanne_kunis.md", "content_types/blog.md", "content_types/book.md", "content_types/code.md", "content_types/collection.md", "content_types/data.md", "content_types/document.md", "content_types/documentation.md", "content_types/event.md", "content_types/notebook.md", "content_types/publication.md", "content_types/readme.md", "content_types/slide.md", "content_types/slides.md", "content_types/tutorial.md", "content_types/video.md", "contributing/format.md", "contributing/index.md", "imprint.md", "licenses/all_rights_reserved.md", "licenses/bsd-3-clause.md", "licenses/bsd_3-clause.md", "licenses/cc-by-4.0.md", "licenses/cc-by_4.0.md", "licenses/mit.md", "licenses/readme.md", "licenses/unknown.md", "readme.md", "tags/artificial_intelligence.md", "tags/bioimage_analysis.md", "tags/deep_learning.md", "tags/fair-principles.md", "tags/imagej.md", "tags/meta_data.md", "tags/napari.md", "tags/neubias.md", "tags/nfdi4bioimage.md", "tags/omero.md", "tags/python.md", "tags/readme.md", "tags/research_data_management.md", "tags/sharing.md", "tags/workflow_engine.md"], "titles": ["Christian tischer (11)", "Constantin pape (6)", "Et al. (7)", "Guillaume witz (8)", "Josh moore (7)", "Kota miura (11)", "Mara lampert (6)", "Martin weigert (8)", "&lt;no title&gt;", "Robert haase (36)", "Susanne kunis (6)", "Blog (15)", "Book (15)", "Code (10)", "Collection (52)", "Data (8)", "Document (5)", "Documentation (14)", "Event (7)", "Notebook (47)", "Publication (40)", "&lt;no title&gt;", "Slide (39)", "Slides (13)", "Tutorial (16)", "Video (20)", "YML format", "How to contribute", "Imprint", "All rights reserved (14)", "Bsd-3-clause (6)", "Bsd 3-clause (9)", "Cc-by-4.0 (58)", "Cc-by 4.0 (6)", "Mit (13)", "&lt;no title&gt;", "Unknown (59)", "NFDI4BioImage Training Materials", "Artificial intelligence (26)", "Bioimage analysis (111)", "Deep learning (6)", "Fair-principles (6)", "Imagej (16)", "Meta data (6)", "Napari (12)", "Neubias (26)", "Nfdi4bioimage (13)", "Omero (16)", "Python (61)", "&lt;no title&gt;", "Research data management (50)", "Sharing (7)", "Workflow engine (12)"], "terms": {"robert": [0, 2, 4, 5, 11, 12, 13, 19, 20, 22, 23, 28, 29, 31, 32, 33, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51], "haas": [0, 2, 4, 5, 11, 12, 13, 19, 20, 22, 23, 28, 29, 31, 32, 33, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51], "elnaz": [0, 9, 20, 23, 32, 39], "faze": [0, 9, 20, 23, 32, 39], "david": [0, 1, 2, 4, 5, 9, 13, 19, 20, 22, 29, 30, 32, 36, 38, 39, 43, 45, 46, 50], "legland": [0, 9, 20, 32, 39], "michael": [0, 5, 9, 10, 12, 20, 29, 32, 36, 38, 39, 46, 50], "doub": [0, 9, 20, 32, 39], "si\u00e2n": [0, 2, 5, 7, 9, 13, 19, 20, 22, 32, 36, 38, 39, 45, 48], "cullei": [0, 2, 5, 7, 9, 13, 19, 20, 22, 32, 36, 38, 39, 45, 48], "ilya": [0, 9, 20, 32, 39], "belevich": [0, 9, 20, 32, 39], "eija": [0, 9, 20, 32, 39], "jokitalo": [0, 9, 20, 32, 39], "martin": [0, 1, 4, 5, 9, 14, 19, 20, 22, 23, 29, 30, 32, 33, 34, 36, 38, 39, 40, 43, 45, 48], "schorb": [0, 9, 20, 32, 39], "anna": [0, 5, 7, 9, 13, 19, 20, 22, 23, 32, 33, 36, 38, 39, 40, 44, 45, 48], "klemm": [0, 5, 9, 13, 20, 22, 32, 36, 39, 45], "licens": [0, 1, 2, 3, 4, 5, 6, 7, 10, 12, 13, 14, 15, 16, 17, 18, 19, 20, 24, 25, 26, 29, 30, 31, 34, 36, 38, 39, 40, 42, 43, 44, 45, 46, 47, 48, 52], "cc": [0, 1, 2, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 22, 23, 24, 25, 28, 31, 34, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "4": [0, 1, 2, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 22, 23, 24, 25, 28, 31, 34, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "0": [0, 1, 2, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 22, 23, 24, 25, 28, 31, 34, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "thi": [0, 9, 19, 20, 22, 23, 26, 27, 29, 32, 33, 34, 39, 40, 41, 45, 47, 48, 50], "articl": [0, 1, 4, 5, 9, 10, 14, 15, 17, 19, 20, 29, 32, 34, 39, 42, 43, 45, 46, 48, 50, 52], "give": [0, 9, 20, 22, 32, 39], "an": [0, 9, 17, 19, 23, 28, 33, 34, 40, 41, 42, 47, 52], "overview": [0, 9, 20, 23, 32, 33, 39, 41, 50], "about": [0, 9, 11, 14, 18, 19, 20, 25, 29, 30, 32, 34, 39, 42, 47, 50, 51], "commonli": [0, 9, 14, 20, 25, 32, 39, 45], "us": [0, 7, 12, 14, 17, 20, 23, 25, 26, 27, 29, 33, 40, 42, 44, 45, 46, 50, 52], "which": [0, 7, 9, 12, 20, 22, 23, 26, 27, 32, 33, 34, 37, 39, 40, 48], "aspect": [0, 9, 16, 20, 32, 39, 50], "consid": [0, 9, 20, 27, 32, 37, 39], "when": [0, 9, 11, 20, 32, 39, 45, 50], "choos": [0, 9, 11, 20, 22, 32, 39, 50], "specif": [0, 9, 27, 32, 34, 39, 47, 48], "project": [0, 9, 14, 20, 22, 25, 32, 37, 41, 46, 47], "tag": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "content": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "type": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "public": [0, 1, 4, 5, 9, 10, 14, 15, 17, 18, 27, 29, 30, 31, 32, 36, 38, 39, 42, 43, 45, 46, 47, 48, 52], "http": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "feb": [0, 9, 20, 32, 39], "onlinelibrari": [0, 9, 10, 20, 32, 39, 50], "wilei": [0, 5, 9, 10, 12, 20, 29, 32, 39, 42, 45, 46, 47, 50], "com": [0, 1, 3, 4, 5, 6, 9, 10, 11, 12, 14, 15, 17, 19, 20, 22, 23, 25, 29, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "doi": [0, 4, 9, 10, 12, 13, 14, 17, 19, 20, 22, 24, 25, 26, 29, 30, 31, 32, 34, 38, 39, 42, 43, 46, 47, 50, 51, 52], "full": [0, 5, 9, 12, 20, 29, 32, 39, 45, 50], "10": [0, 4, 5, 9, 10, 12, 14, 17, 19, 20, 22, 25, 28, 29, 30, 31, 32, 34, 38, 39, 42, 43, 45, 46, 47, 48, 50, 51, 52], "1002": [0, 5, 9, 12, 20, 29, 32, 39, 42, 45, 46, 47, 50], "1873": [0, 9, 20, 32, 39], "3468": [0, 9, 20, 32, 39], "14451": [0, 9, 20, 32, 39], "kota": [0, 2, 4, 9, 12, 13, 19, 20, 22, 24, 29, 32, 36, 39, 43, 45], "miura": [0, 2, 4, 9, 12, 13, 19, 20, 22, 24, 29, 32, 36, 39, 43, 45], "christoph": [0, 5, 14, 17, 18, 19, 20, 29, 32, 34, 36, 39, 46, 47, 48, 50], "schiklenk": [0, 5, 36], "clemen": [0, 5, 36], "lakner": [0, 5, 36], "aliaksandr": [0, 5, 36], "halavatyi": [0, 5, 36], "2014": [0, 5, 22, 32, 36, 52], "unknown": [0, 1, 2, 3, 5, 7, 9, 12, 13, 14, 15, 17, 19, 20, 22, 24, 25, 38, 39, 42, 44, 45, 47, 48, 50, 52], "htmanalysiscours": [0, 5, 36], "ashi": [0, 20, 32, 39, 50], "ravindran": [0, 20, 32, 39, 50], "sabin": [0, 20, 32, 39, 50], "reither": [0, 20, 32, 39, 50], "nicola": [0, 12, 20, 32, 39, 48, 50], "chiaruttini": [0, 20, 32, 39, 50], "rainer": [0, 20, 32, 39, 50], "pepperkok": [0, 20, 32, 39, 50], "nil": [0, 20, 32, 39, 50], "norlin": [0, 20, 32, 39, 50], "research": [0, 1, 17, 18, 19, 23, 25, 27, 33, 36, 37, 43, 44, 45, 48, 52], "manag": [0, 1, 17, 18, 23, 25, 27, 33, 34, 37, 40, 44, 45, 51, 52], "org": [0, 2, 4, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 29, 30, 31, 33, 34, 36, 38, 39, 41, 42, 43, 46, 47, 48, 51, 52], "1093": [0, 20, 32, 39, 50], "bioinformat": [0, 14, 17, 18, 32, 36, 39, 48, 50, 52], "btab106": [0, 20, 32, 39, 50], "slide": [0, 1, 2, 3, 4, 5, 7, 9, 13, 16, 19, 24, 27, 31, 33, 34, 36, 38, 39, 40, 41, 42, 45, 48, 51, 52], "tischi": [0, 1, 22, 24, 34, 36, 39, 45], "present": [0, 3, 22, 36, 38, 39, 45, 46], "carolina": [0, 24, 36, 39, 45], "w\u00e4hlby": [0, 24, 36, 39, 45], "maxim": [0, 24, 36, 39, 45], "bombrun": [0, 24, 36, 39, 45], "tutori": [0, 5, 12, 22, 23, 32, 41, 45, 46, 47, 50, 51], "schmi": [0, 5, 20, 29, 39], "nelson": [0, 5, 19, 20, 29, 30, 32, 39], "sergii": [0, 5, 20, 29, 39], "avilov": [0, 5, 20, 29, 39], "gert": [0, 5, 20, 29, 39], "jan": [0, 1, 5, 9, 19, 20, 22, 29, 32, 36, 38, 39, 50], "bakker": [0, 5, 20, 29, 39], "cristina": [0, 5, 20, 29, 39], "bertocchi": [0, 5, 20, 29, 39], "johanna": [0, 5, 14, 19, 20, 29, 34, 39, 50], "bischof": [0, 5, 20, 29, 39, 50], "ulrik": [0, 5, 12, 20, 29, 32, 39, 50], "boehm": [0, 5, 20, 29, 32, 39], "brocher": [0, 5, 20, 29, 39], "mariana": [0, 5, 20, 29, 39], "t": [0, 5, 12, 20, 27, 29, 30, 39, 47], "carvalho": [0, 5, 20, 29, 39], "catalin": [0, 5, 20, 29, 39], "chiritescu": [0, 5, 20, 29, 39], "jana": [0, 5, 20, 29, 39], "beth": [0, 5, 7, 12, 14, 19, 20, 23, 29, 30, 31, 32, 33, 39, 40, 48], "cimini": [0, 5, 7, 12, 14, 19, 20, 23, 29, 30, 31, 32, 33, 39, 40, 48], "eduardo": [0, 5, 20, 29, 39], "cond": [0, 5, 20, 29, 39], "sousa": [0, 5, 20, 29, 39], "ebner": [0, 5, 20, 29, 39], "rupert": [0, 5, 20, 29, 39], "ecker": [0, 5, 20, 29, 39], "kevin": [0, 1, 4, 5, 9, 12, 14, 17, 19, 20, 29, 30, 31, 32, 39, 44, 45, 46, 48, 50], "eliceiri": [0, 5, 9, 14, 20, 29, 30, 31, 32, 39, 45], "julia": [0, 5, 10, 17, 18, 20, 22, 25, 29, 32, 39, 46, 47, 48, 50], "fernandez": [0, 5, 20, 29, 39], "rodriguez": [0, 5, 20, 29, 39], "nathali": [0, 5, 20, 29, 39], "gaudreault": [0, 5, 20, 29, 39], "laurent": [0, 5, 20, 29, 39], "gelman": [0, 5, 20, 29, 39], "grunwald": [0, 5, 20, 29, 39], "tingt": [0, 5, 20, 29, 39], "gu": [0, 5, 20, 29, 39], "nadia": [0, 5, 20, 29, 39], "halidi": [0, 5, 20, 29, 39], "mathia": [0, 5, 20, 29, 39], "hammer": [0, 5, 20, 29, 39], "matthew": [0, 5, 20, 29, 39], "hartlei": [0, 5, 20, 29, 39], "mari": [0, 1, 4, 5, 9, 20, 29, 32, 39, 43, 46, 50], "held": [0, 5, 20, 29, 34, 39, 47, 48], "florian": [0, 2, 4, 5, 9, 14, 19, 20, 22, 24, 29, 32, 34, 36, 39, 42, 43, 45, 48], "jug": [0, 5, 9, 14, 19, 20, 29, 32, 34, 39, 42, 48], "varun": [0, 5, 20, 29, 39], "kapoor": [0, 5, 20, 29, 39], "ays": [0, 5, 20, 29, 39], "aslihan": [0, 5, 20, 29, 39], "koksoi": [0, 5, 20, 29, 39], "judith": [0, 5, 20, 29, 39], "lacost": [0, 5, 20, 29, 39], "sylvia": [0, 5, 20, 29, 39], "le": [0, 5, 20, 29, 39], "d\u00e9v\u00e9dec": [0, 5, 20, 29, 39], "sylvi": [0, 5, 20, 29, 39], "guyad": [0, 5, 20, 29, 39], "penghuan": [0, 5, 20, 29, 39], "liu": [0, 5, 20, 29, 39], "gabriel": [0, 5, 9, 20, 29, 32, 39, 45], "g": [0, 5, 9, 20, 27, 29, 32, 37, 39, 45], "aastha": [0, 5, 20, 22, 29, 36, 39, 50], "mathur": [0, 5, 20, 22, 29, 36, 39, 50], "paula": [0, 4, 5, 9, 14, 20, 29, 31, 32, 39, 43], "montero": [0, 5, 14, 20, 29, 31, 39, 43], "llopi": [0, 5, 14, 20, 29, 31, 39, 43], "roland": [0, 5, 10, 20, 29, 39, 50], "nitschk": [0, 5, 10, 20, 29, 39, 50], "alison": [0, 5, 20, 29, 39], "north": [0, 5, 20, 29, 39], "adam": [0, 5, 9, 20, 29, 32, 39], "c": [0, 5, 9, 14, 20, 25, 29, 32, 39], "parslow": [0, 5, 20, 29, 39], "alex": [0, 5, 20, 29, 39, 43], "payn": [0, 5, 20, 29, 39], "dwyer": [0, 5, 20, 29, 39], "laur": [0, 4, 5, 9, 20, 29, 32, 39, 43], "plantard": [0, 4, 5, 9, 20, 29, 32, 39, 43], "rizwan": [0, 5, 20, 29, 39], "ali": [0, 5, 20, 29, 39], "britta": [0, 5, 20, 29, 39], "schroth": [0, 5, 20, 29, 39], "diez": [0, 5, 20, 29, 39], "luca": [0, 4, 5, 14, 19, 20, 29, 32, 34, 39, 48], "sch\u00fctz": [0, 5, 20, 29, 39], "ryan": [0, 5, 7, 9, 20, 23, 29, 32, 33, 39, 40, 43, 48], "scott": [0, 5, 20, 29, 39], "arn": [0, 5, 20, 29, 39], "seitz": [0, 5, 20, 29, 39], "olaf": [0, 5, 20, 29, 39], "selchow": [0, 5, 20, 29, 39], "ved": [0, 5, 20, 29, 39], "p": [0, 5, 9, 12, 20, 22, 29, 32, 36, 39, 45, 48], "sharma": [0, 5, 20, 29, 39], "spital": [0, 5, 20, 29, 39], "sathya": [0, 5, 20, 29, 39], "srinivasan": [0, 5, 20, 29, 39], "caterina": [0, 5, 10, 17, 20, 29, 36, 38, 39, 43, 50, 52], "strambio": [0, 5, 10, 20, 29, 39, 43, 50], "de": [0, 2, 4, 5, 7, 9, 10, 13, 14, 17, 19, 20, 22, 23, 24, 26, 28, 29, 31, 32, 33, 36, 38, 39, 40, 41, 42, 43, 45, 46, 48, 50, 52], "castillia": [0, 5, 10, 20, 29, 39, 43, 50], "dougla": [0, 5, 20, 29, 39], "taatj": [0, 5, 20, 29, 39], "helena": [0, 5, 14, 20, 29, 31, 39], "klara": [0, 5, 20, 29, 39], "jambor": [0, 5, 14, 20, 29, 31, 39], "all": [0, 4, 5, 9, 10, 12, 14, 20, 23, 25, 27, 32, 37, 39, 42, 43, 45, 46, 47, 50], "right": [0, 5, 9, 10, 12, 14, 20, 22, 25, 27, 32, 39, 42, 43, 45, 46, 47, 48, 50], "reserv": [0, 5, 9, 10, 12, 14, 20, 25, 27, 39, 42, 43, 45, 46, 47, 50], "www": [0, 1, 4, 5, 7, 9, 10, 12, 14, 15, 16, 17, 18, 19, 20, 22, 23, 25, 29, 30, 31, 32, 33, 34, 36, 39, 40, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "natur": [0, 1, 4, 5, 10, 14, 15, 17, 19, 20, 29, 32, 34, 39, 42, 43, 46, 50, 52], "s41592": [0, 1, 4, 5, 9, 10, 17, 20, 29, 32, 39, 42, 43, 46, 50, 52], "023": [0, 5, 20, 29, 39, 50], "01987": [0, 5, 20, 29, 39], "9": [0, 4, 5, 9, 20, 29, 32, 39, 43], "mit": [0, 1, 3, 12, 13, 14, 17, 19, 24, 28, 38, 39, 40, 44, 47, 48, 52], "train": [0, 7, 26, 27, 40], "registr": [0, 34], "big": [0, 1, 3, 19, 34, 36, 39, 48], "warp": [0, 34], "elastix": [0, 34], "onlin": [0, 9, 22, 23, 24, 25, 29, 32, 37, 39, 41, 51], "video": [0, 7, 10, 14, 22, 23, 26, 29, 32, 33, 36, 39, 40, 44, 45, 46, 47, 48, 50], "ebi": [0, 7, 14, 15, 22, 23, 25, 32, 33, 39, 40, 48], "ac": [0, 7, 14, 15, 19, 22, 23, 25, 32, 33, 39, 40, 42, 48], "uk": [0, 7, 14, 15, 19, 22, 23, 25, 32, 33, 39, 40, 42, 48], "event": [0, 17, 19, 20, 22, 25, 27, 32, 39, 46, 48], "6019": [0, 22, 25, 32, 39], "tol": [0, 22, 25, 32, 39], "bioimageanalysis22": [0, 22, 25, 32, 39], "w": [0, 1, 4, 9, 14, 20, 22, 25, 30, 31, 32, 39, 42, 45, 46, 50], "2022": [0, 1, 9, 10, 11, 20, 22, 25, 29, 32, 46, 50], "00001": [0, 22, 25, 32, 39], "1": [0, 9, 12, 14, 20, 22, 25, 28, 29, 32, 34, 37, 39, 42, 47, 48], "drive": [0, 22, 25, 32, 36, 39], "googl": [0, 3, 22, 25, 32, 36, 38, 39, 45], "d": [0, 3, 5, 9, 17, 20, 22, 25, 32, 36, 38, 39, 42, 45, 52], "1mhuqfkhzcyu3bchwmqogiybkjamu5msg": [0, 22, 25, 32, 39], "view": [0, 25, 32, 36], "josh": [0, 1, 5, 9, 10, 20, 23, 32, 43, 46, 48, 50], "moor": [0, 1, 5, 9, 10, 17, 18, 20, 23, 32, 43, 46, 47, 48, 50], "chri": [0, 1, 4, 20, 32, 46, 50], "allan": [0, 1, 4, 20, 32, 46, 50], "s\u00e9bastien": [0, 1, 4, 20, 32, 46, 50], "besson": [0, 1, 4, 20, 32, 46, 50], "jean": [0, 1, 2, 4, 5, 9, 13, 19, 20, 22, 24, 32, 36, 39, 45, 46, 50], "burel": [0, 1, 4, 20, 32, 46, 50], "erin": [0, 1, 4, 20, 32, 46, 50], "diel": [0, 1, 4, 20, 32, 46, 50], "gault": [0, 1, 4, 20, 32, 46, 50], "kozlowski": [0, 1, 4, 20, 32, 46, 50], "dominik": [0, 1, 4, 7, 20, 22, 23, 32, 33, 38, 39, 40, 46, 48, 50], "lindner": [0, 1, 4, 20, 32, 46, 50], "melissa": [0, 1, 4, 20, 32, 43, 46, 50], "linkert": [0, 1, 4, 20, 32, 43, 46, 50], "trevor": [0, 1, 4, 20, 32, 46, 50], "manz": [0, 1, 4, 20, 32, 46, 50], "Will": [0, 1, 4, 20, 32, 46, 50], "constantin": [0, 4, 7, 19, 20, 22, 32, 34, 36, 38, 39, 46, 48, 50], "pape": [0, 4, 7, 19, 20, 22, 32, 34, 36, 38, 39, 40, 46, 48, 50], "jason": [0, 1, 4, 14, 20, 31, 32, 46, 50], "r": [0, 1, 4, 17, 19, 20, 32, 37, 38, 42, 46, 48, 50, 52], "swedlow": [0, 1, 4, 20, 32, 46, 50], "nfdi4bioimag": [0, 1, 9, 22, 23, 25, 26, 29], "021": [0, 1, 4, 10, 14, 19, 20, 29, 32, 34, 43, 46, 50], "01326": [0, 1, 4, 20, 32, 46, 50], "bugra": [0, 24, 36], "oezdemir": [0, 24, 36], "git": [0, 22, 31, 39, 42, 45], "embl": [0, 18, 39], "course_script": [0, 24, 36], "python": [0, 1, 4, 7, 18, 22, 23, 25, 33, 38, 40, 42, 46, 50], "artifici": [1, 3, 7, 11, 12, 14, 17, 19, 20, 24, 34, 36, 45, 52], "intellig": [1, 3, 7, 11, 12, 14, 17, 19, 20, 24, 34, 36, 45, 52], "constantinpap": [1, 34, 36, 38, 39], "resourc": [1, 2, 19, 22, 25, 26, 27, 29, 34, 40, 46, 51], "funk": [1, 19, 22, 36, 38, 39], "morgan": [1, 19, 22, 36, 38, 39], "schwartz": [1, 19, 22, 36, 38, 39], "xiaoyan": [1, 19, 22, 36, 38, 39], "notebook": [1, 2, 3, 5, 7, 9, 13, 14, 18, 20, 22, 30, 32, 36, 38, 40, 42, 44, 45, 50], "jlrumberg": [1, 19, 22, 36, 38, 39], "weigert": [1, 19, 22, 23, 33, 36, 38, 39, 40, 45, 48], "kreshuklab": [1, 7, 19, 24, 36, 38, 48], "christian": [1, 4, 5, 9, 10, 20, 22, 24, 25, 29, 32, 34, 36, 39, 43, 45, 46, 47, 50], "tischer": [1, 4, 5, 9, 20, 22, 24, 25, 29, 32, 34, 36, 39, 45, 46, 50], "adrian": [1, 24, 36, 38, 39], "wolni": [1, 24, 36, 38, 39], "vison": [1, 36, 38, 39], "iv\u00e1n": [2, 14, 19, 32], "hidalgo": [2, 14, 19, 32], "collect": [2, 9, 12, 15, 17, 18, 19, 24, 25, 26, 27, 29, 31, 32, 36, 37, 40, 41, 42, 44, 45, 47, 48, 50, 52], "henriqueslab": [2, 14, 19, 32, 34], "jacob": [2, 32], "deppen": [2, 32], "kimberli": [2, 32], "meechan": [2, 32], "palmquist": [2, 32], "ulf": [2, 32], "schiller": [2, 32], "turner": [2, 32], "mariann": [2, 32], "corvellec": [2, 32], "tobi": [2, 22, 32], "hodg": [2, 22, 32], "analysi": [2, 3, 6, 13, 15, 16, 27, 37], "datacarpentri": [2, 13, 24, 32, 34], "jona": [2, 13, 19, 34, 36, 39, 48], "hartmann": [2, 13, 19, 34, 36, 39, 48], "whoisjack": [2, 13, 19, 34, 36, 39, 48], "codingclub": [2, 13, 19, 36, 48], "bio": [2, 13, 17, 27, 37, 45, 52], "20club": [2, 13, 19, 36, 48], "curat": [2, 13, 14, 19, 22, 25, 32, 36, 46, 47, 48, 50], "20tutori": [2, 13, 19, 36, 48], "wei": [2, 17, 20, 36, 38, 40, 48, 52], "ouyang": [2, 17, 20, 36, 38, 40, 48, 52], "imjoi": [2, 36], "team": [2, 22, 25, 32, 46, 47, 50], "curti": [2, 5, 9, 20, 22, 24, 36, 39, 42, 45], "rueden": [2, 5, 9, 20, 22, 24, 36, 39, 42, 45], "levet": [2, 4, 5, 9, 20, 22, 24, 32, 36, 39, 43, 45], "j": [2, 4, 5, 17, 20, 22, 24, 30, 32, 36, 39, 42, 45, 48, 52], "b": [2, 5, 9, 20, 22, 24, 28, 32, 36, 39, 45], "sibarta": [2, 5, 22, 24, 36, 39, 45], "alexandr": [2, 4, 5, 9, 20, 22, 24, 32, 36, 39, 43, 45], "dafour": [2, 5, 22, 24, 36, 39, 45], "daniel": [2, 4, 5, 9, 14, 17, 19, 20, 22, 24, 32, 34, 36, 39, 43, 45, 48, 52], "sage": [2, 4, 5, 9, 20, 22, 24, 32, 36, 39, 43, 45], "sebastien": [2, 5, 22, 24, 36, 39, 45], "tosi": [2, 5, 22, 24, 36, 39, 45], "michal": [2, 5, 22, 24, 36, 39, 45], "kozubek": [2, 5, 22, 24, 36, 39, 45], "yve": [2, 5, 9, 13, 19, 20, 22, 24, 32, 36, 39, 45], "tinevez": [2, 5, 9, 13, 19, 20, 22, 24, 32, 36, 39, 45], "neubias_bioimage_analyst_course2017": [2, 5, 22, 24, 36, 39, 45], "chong": [2, 4, 5, 9, 13, 19, 20, 22, 32, 36, 39, 43, 45], "zhang": [2, 4, 5, 9, 13, 19, 20, 22, 32, 36, 39, 43, 45], "juliu": [2, 5, 9, 13, 19, 22, 36, 39, 45], "hossein": [2, 5, 9, 13, 19, 22, 36, 39, 45], "pejamn": [2, 5, 9, 13, 19, 22, 36, 39, 45], "rasti": [2, 5, 7, 9, 13, 19, 22, 36, 38, 39, 45, 48], "rousseau": [2, 5, 9, 13, 19, 22, 36, 38, 39, 45], "ignacio": [2, 5, 9, 13, 19, 22, 36, 38, 39, 45], "arganda": [2, 5, 9, 13, 19, 22, 36, 38, 39, 45], "carrera": [2, 5, 9, 13, 19, 22, 36, 38, 39, 45], "neubias_analystschool2019": [2, 5, 9, 13, 19, 22, 36, 39, 45], "marion": [2, 5, 9, 13, 19, 20, 22, 32, 36, 39, 45], "louveaux": [2, 5, 9, 13, 19, 20, 22, 32, 36, 39, 45], "st\u00e9phane": [2, 5, 13, 19, 22, 36, 39, 45], "verger": [2, 5, 13, 19, 22, 36, 39, 45], "ariann": [2, 5, 13, 19, 22, 36, 39, 45], "bercowski": [2, 5, 13, 19, 22, 36, 39, 45], "rama": [2, 5, 13, 19, 22, 36, 39, 45], "estibaliz": [2, 4, 5, 9, 13, 19, 20, 22, 23, 32, 33, 36, 38, 39, 40, 41, 43, 45], "g\u00f3mez": [2, 4, 5, 9, 13, 19, 20, 22, 23, 32, 33, 36, 38, 39, 40, 41, 43, 45], "marisc": [2, 4, 5, 7, 9, 13, 19, 20, 22, 23, 32, 33, 36, 38, 39, 40, 41, 43, 45, 48], "neubias_analystschool2020": [2, 5, 13, 19, 22, 36, 39, 45], "guiwitz": [3, 19, 30, 31, 34, 36, 38, 39, 45, 48], "micpy_workshop_2022": [3, 19, 36, 39, 48], "dlimag": [3, 19, 36, 38, 39, 48], "data": [3, 17, 18, 26, 27, 37, 42, 52], "daskcours": [3, 19, 36, 39, 48], "fundamentals_image_process": [3, 19, 36, 39], "bsd": [3, 9, 12, 14, 16, 19, 20, 22, 39, 42, 45, 47, 48], "3": [3, 9, 12, 13, 14, 19, 20, 22, 25, 29, 34, 38, 39, 42, 44, 45, 47, 48], "claus": [3, 9, 12, 14, 16, 19, 20, 22, 39, 42, 45, 47, 48], "pyimagecourse_beginn": [3, 19, 31, 39, 48], "seri": [3, 19, 34, 48], "expos": [3, 19, 34, 48], "how": [3, 9, 19, 20, 22, 23, 24, 29, 32, 33, 34, 41, 42, 45, 48], "do": [3, 5, 9, 12, 19, 20, 27, 29, 34, 39, 42, 45, 46, 47, 48, 50], "mostli": [3, 19, 27, 32, 34, 44, 48], "basic": [3, 9, 19, 22, 32, 34, 48], "some": [3, 14, 15, 19, 27, 32, 34, 39, 40, 44, 48], "advanc": [3, 19, 34, 36, 48], "It": [3, 19, 22, 27, 32, 34, 48, 52], "standard": [3, 19, 34, 48], "packag": [3, 19, 34, 40, 52], "maplotlib": [3, 19, 34, 48], "part": [3, 19, 34, 48], "heavili": [3, 19, 34, 48], "base": [3, 17, 22, 25, 30, 32, 34, 36, 46, 47, 50, 52], "scikit": [3, 32, 34, 44], "python_image_process": [3, 19, 34, 48], "neubia": [3, 12, 29, 42, 44, 50], "doc": [3, 12, 17, 22, 32, 36, 38, 39, 45, 47], "1q8q1xe": [3, 22, 36, 39, 45], "c35tvcsrxzay98s2uywwxpp0cfcljbmmfpco": [3, 22, 36, 39, 45], "edit": [3, 22, 27, 36, 38, 39, 45], "id": [3, 22, 36, 38, 39, 45], "ga456d5535c_2_53": [3, 22, 36, 39, 45], "numpypandas_cours": [3, 19, 30, 48], "susann": [4, 20, 22, 25, 29, 32, 43, 46, 47, 50], "kuni": [4, 20, 22, 25, 29, 32, 43, 46, 47, 50], "confer": [4, 10, 18, 20, 32, 39, 46, 50], "abstract": [4, 10, 20, 32, 46, 48, 50], "52825": [4, 10, 20, 32, 46, 50], "cordi": [4, 10, 20, 32, 46, 50], "v1i": [4, 10, 20, 32, 46, 50], "285": [4, 10, 20, 32, 46, 50], "mat\u00fa\u0161": [4, 5, 9, 20, 32, 43], "kala\u0161": [4, 5, 9, 20, 32, 43], "joakim": [4, 5, 9, 20, 32, 43], "lindblad": [4, 5, 9, 20, 32, 43], "jone": [4, 5, 9, 14, 19, 20, 30, 32, 34, 39, 43], "nata\u0161a": [4, 5, 9, 20, 32, 43], "sladoj": [4, 5, 9, 20, 32, 43], "moritz": [4, 5, 9, 17, 18, 20, 32, 43, 46, 47, 48, 50], "kirschmann": [4, 5, 9, 20, 32, 43], "anatol": [4, 5, 9, 20, 32, 43], "chessel": [4, 5, 9, 20, 32, 43], "leandro": [4, 5, 9, 20, 32, 43], "scholz": [4, 5, 9, 20, 32, 43], "fabiann": [4, 5, 9, 20, 32, 43], "r\u00f6ssler": [4, 5, 9, 20, 32, 43], "laura": [4, 5, 9, 20, 32, 43], "nicol\u00e1": [4, 5, 9, 20, 32, 43], "s\u00e1enz": [4, 5, 9, 20, 32, 43], "john": [4, 5, 9, 20, 32, 43, 50], "bogov": [4, 5, 9, 20, 32, 43], "dufour": [4, 5, 9, 20, 32, 43], "xavier": [4, 5, 9, 20, 32, 43], "heiligenstein": [4, 5, 9, 20, 32, 43], "domin": [4, 5, 9, 19, 20, 32, 39, 43, 48], "waith": [4, 5, 9, 19, 20, 32, 39, 43, 48], "charlott": [4, 5, 9, 20, 32, 43], "domart": [4, 5, 9, 20, 32, 43], "matthia": [4, 5, 9, 20, 32, 43], "karreman": [4, 5, 9, 20, 32, 43], "raf": [4, 5, 9, 20, 32, 43], "van": [4, 5, 9, 20, 32, 43], "pla": [4, 5, 9, 20, 32, 43], "h\u00f6rl": [4, 5, 9, 20, 32, 43], "lassi": [4, 5, 9, 20, 32, 43], "paavolainen": [4, 5, 9, 20, 32, 43], "ivana": [4, 5, 9, 20, 32, 43], "vrhovac": [4, 5, 9, 20, 32, 43], "maduni\u0107": [4, 5, 9, 20, 32, 43], "dean": [4, 5, 9, 20, 32, 43], "karaica": [4, 5, 9, 20, 32, 43], "arrat": [4, 5, 9, 20, 32, 43], "mu\u00f1oz": [4, 5, 9, 20, 32, 43], "barrutia": [4, 5, 9, 20, 32, 43], "sampaio": [4, 5, 9, 20, 32, 43], "sebastian": [4, 5, 9, 10, 19, 20, 29, 32, 43, 48, 50], "munck": [4, 5, 9, 20, 32, 43], "ofra": [4, 5, 9, 20, 32, 39, 43, 45], "golani": [4, 5, 9, 20, 32, 39, 43, 45], "jon": [4, 5, 9, 20, 32, 43], "ison": [4, 5, 9, 20, 32, 43], "alban": [4, 5, 9, 20, 32, 43], "gaignard": [4, 5, 9, 20, 32, 43], "herv\u00e9": [4, 5, 9, 20, 32, 43], "m\u00e9nager": [4, 5, 9, 20, 32, 43], "julien": [4, 5, 9, 20, 32, 39, 43, 45], "colombelli": [4, 5, 9, 20, 32, 39, 43, 45], "perrin": [4, 5, 9, 20, 32, 39, 43, 45], "paul": [4, 5, 9, 20, 32, 39, 43, 45], "gilloteaux": [4, 5, 9, 20, 32, 39, 43, 45], "meta": [4, 5, 9, 10, 26, 29, 32, 37, 50], "poster": [4, 5, 9, 20, 27, 32, 42, 43, 46], "f1000research": [4, 5, 9, 20, 22, 23, 32, 33, 38, 39, 40, 41, 43, 45, 46, 48, 50, 51], "162": [4, 5, 9, 20, 32, 43], "ceur": [4, 10, 20, 32, 46], "ws": [4, 10, 20, 32, 46], "vol": [4, 10, 20, 32, 46], "3415": [4, 10, 20, 32, 46], "paper": [4, 10, 20, 32, 46], "27": [4, 10, 20, 32, 46], "pdf": [4, 5, 10, 12, 16, 20, 22, 29, 32, 36, 38, 39, 45, 46, 50], "schmidt": [4, 7, 9, 10, 19, 20, 22, 25, 29, 32, 36, 38, 39, 42, 43, 45, 46, 47, 48, 50], "janina": [4, 20, 32, 46, 50], "hann": [4, 20, 32, 46, 50], "meester": [4, 20, 32, 46, 50], "elisa": [4, 10, 20, 22, 25, 32, 46, 47, 50], "ferrando": [4, 10, 20, 22, 25, 32, 46, 47, 50], "mai": [4, 7, 10, 20, 22, 23, 25, 32, 33, 34, 36, 39, 40, 46, 47, 48, 50], "stefani": [4, 10, 20, 22, 25, 29, 32, 43, 46, 47, 50], "weidtkamp": [4, 10, 20, 22, 25, 29, 32, 43, 46, 47, 50], "peter": [4, 9, 10, 14, 17, 18, 19, 20, 22, 23, 25, 29, 31, 32, 39, 43, 44, 45, 46, 47, 48, 50], "member": [4, 20, 22, 32, 46, 50], "initi": 4, "11": [4, 9, 20, 22, 25, 32, 36, 39, 46, 47, 50], "638": [4, 20, 32, 46, 50], "marconato": [4, 20, 32, 48], "giovanni": [4, 20, 32, 48], "palla": [4, 20, 32, 48], "yamauchi": [4, 12, 17, 19, 20, 32, 39, 44, 45, 48, 50], "isaac": [4, 20, 32, 48], "virshup": [4, 20, 32, 48], "elya": [4, 20, 32, 48], "heidari": [4, 20, 32, 48], "tim": [4, 12, 14, 19, 20, 32, 34, 39, 48], "trei": [4, 20, 32, 48], "marcella": [4, 20, 32, 48], "toth": [4, 20, 32, 48], "rahul": [4, 20, 32, 48], "shrestha": [4, 20, 32, 48], "harald": [4, 20, 32, 48], "v\u00f6hringer": [4, 20, 32, 48], "wolfgang": [4, 20, 32, 48], "huber": [4, 20, 32, 48], "gerstung": [4, 20, 32, 48], "fabian": [4, 20, 32, 48], "thei": [4, 9, 20, 22, 27, 32, 37, 39, 48, 50], "oliv": [4, 14, 19, 20, 32, 34, 48], "stegl": [4, 20, 32, 48], "preprint": [4, 20, 30, 32, 39, 48, 51], "biorxiv": [4, 14, 19, 20, 30, 32, 34, 39, 48, 51], "1101": [4, 14, 19, 20, 30, 32, 34, 39, 48, 51], "2023": [4, 6, 9, 11, 14, 22, 23, 25, 30, 33, 34, 39, 40, 44, 51], "05": [4, 6, 9, 11, 20, 30, 32, 39, 44, 48, 50], "539647v1": [4, 20, 32, 48], "keynot": [4, 23, 32, 50], "hand": [4, 23, 24, 32, 39, 41, 50], "meet": [4, 22, 23, 50], "d\u00fcsseldorf": [4, 23, 32, 50], "germani": [4, 22, 23, 25, 32, 37, 46, 47, 50], "octob": [4, 23, 32, 50], "16": [4, 22, 23, 32, 39, 50], "zenodo": [4, 10, 12, 13, 14, 16, 22, 23, 24, 25, 33, 38, 39, 41, 46, 47, 48, 52], "record": [4, 9, 10, 12, 13, 14, 16, 22, 23, 24, 25, 32, 33, 39, 41, 46, 47, 48, 50, 52], "10008465": [4, 23, 32, 50], "book": [5, 13, 19, 24, 29, 31, 32, 34, 36, 37, 38, 39, 42, 44, 45, 48, 50], "ij_textbook1": [5, 12, 29, 39], "analyticalsci": [5, 9, 12, 20, 29, 39, 42, 45, 46, 47, 50], "wa": [5, 9, 12, 20, 29, 39, 42, 45, 46, 47, 50], "00050003": [5, 12, 29, 39, 45], "bioimagedataanalysi": [5, 12, 29, 39, 45], "s": [5, 17, 18, 29, 37, 43, 45, 48], "A": [5, 18, 24, 25, 26, 29, 34, 43, 45, 47, 48], "bias_nucleus_segment": [5, 12, 24, 36, 39, 45], "fabric": [5, 9, 20, 32, 39, 45], "cordeli\u00e8r": [5, 9, 20, 32, 39, 45], "rocco": [5, 9, 20, 32, 39, 45], "antuono": [5, 9, 20, 32, 39, 45], "romain": [5, 9, 14, 19, 20, 32, 34, 39, 45], "guiet": [5, 9, 20, 32, 39, 45], "h": [5, 9, 17, 18, 20, 32, 37, 39, 45, 46, 47, 48, 50], "2021": [5, 9, 11, 30, 45, 51], "334": [5, 9, 20, 32, 39, 45], "v1": [5, 9, 20, 32, 39, 45], "et": [5, 9, 12, 13, 14, 17, 19, 20, 22, 24, 29, 31, 32, 36, 39, 42, 43, 45, 48, 50, 52], "al": [5, 9, 12, 13, 14, 17, 19, 20, 22, 24, 28, 29, 31, 32, 36, 39, 42, 43, 45, 48, 50, 52], "code": [5, 9, 22, 24, 32, 34, 45], "dropbox": [5, 22, 36, 39, 45], "5abw3cvxrhpobg4": [5, 22, 36, 39, 45], "20220923_defragmentationt": [5, 22, 36, 39, 45], "dl": [5, 7, 23, 33, 34, 40, 41, 45, 48], "bioimag": [6, 11, 16, 37, 47], "blog": [6, 9, 26, 27, 32, 38, 39, 44, 47, 48, 50, 51], "focalplan": [6, 9, 11, 32, 39, 44, 48, 50, 51], "biologist": [6, 9, 11, 32, 39, 44, 50, 51], "03": [6, 11, 39, 44, 48], "30": [6, 11, 39, 44, 48], "conda": 6, "mamba": 6, "biapol": [6, 9, 11, 18, 19, 32, 38, 39, 44, 47, 48], "github": [6, 9, 11, 12, 17, 18, 19, 20, 22, 23, 26, 27, 31, 32, 34, 37, 38, 39, 40, 42, 44, 45, 47, 48, 50, 51, 52], "io": [6, 9, 11, 12, 14, 16, 17, 18, 19, 20, 22, 23, 24, 29, 31, 32, 38, 39, 40, 42, 44, 45, 47, 48, 50, 51, 52], "mara_lampert": [6, 11, 32, 48], "getting_started_with_mambaforge_and_python": [6, 11, 32, 48], "readm": [6, 9, 11, 32, 38, 39, 47, 48], "html": [6, 9, 11, 12, 14, 15, 16, 17, 18, 19, 20, 24, 31, 32, 36, 38, 39, 40, 42, 44, 45, 47, 48, 50, 51], "04": [6, 9, 11, 13, 32, 39, 44, 48, 50, 51], "13": [6, 11, 22, 25, 32, 33, 39, 40, 41, 44, 47, 48, 50], "02": [6, 9, 11, 32, 39, 44, 48, 50, 51], "anisotropi": [6, 11, 39, 44, 48], "06": [6, 9, 11, 20, 30, 32, 37, 39, 44, 48, 50], "01": [6, 9, 11, 18, 22, 36, 39, 42, 44, 48], "maweigert": [7, 19, 22, 36, 38, 39, 45, 48], "embo_2022": [7, 19, 36, 38, 39, 48], "uw": [7, 19, 22, 36, 38, 39, 45, 48], "fiji": [7, 17, 22, 31, 36, 38, 45, 52], "zidas_2020_dl_intro_part_2": [7, 19, 36, 38, 39], "valentyna": [7, 19, 36, 38, 48], "zinchenko": [7, 19, 36, 38, 48], "pejman": [7, 19, 36, 38, 39, 48], "szymon": [7, 19, 36, 38, 48], "stoma": [7, 19, 36, 38, 48], "teach": [7, 9, 19, 22, 40, 44, 47, 50], "benjamin": [7, 19, 22, 36, 38, 39, 45, 48], "galluss": [7, 19, 36, 38, 48], "albert": [7, 19, 32, 36, 38, 39, 42, 48], "dominguez": [7, 19, 36, 38, 48], "mant": [7, 19, 36, 38, 48], "buglakova": [7, 19, 24, 36, 38, 48], "alyona": [7, 19, 24, 36, 38, 48], "andrii": [7, 23, 33, 40, 48], "iudin": [7, 23, 33, 40, 48], "foix": [7, 23, 33, 40, 48], "romero": [7, 23, 33, 40, 48], "kreshuk": [7, 9, 13, 19, 20, 22, 23, 32, 33, 39, 40, 45, 48], "awai": [7, 23, 33, 40, 48], "athar": [7, 23, 33, 40, 48], "kutra": [7, 22, 23, 32, 33, 38, 39, 40, 48], "estibali": [7, 23, 33, 40, 48], "gomez": [7, 23, 33, 40, 48], "franc": [7, 10, 20, 23, 29, 33, 40, 43, 48, 50], "wong": [7, 10, 20, 23, 29, 33, 40, 43, 48, 50], "guillaum": [7, 14, 19, 22, 23, 30, 31, 33, 34, 36, 38, 39, 40, 45, 48], "jacquemet": [7, 14, 19, 23, 33, 34, 40, 48], "kedar": [7, 23, 33, 40, 48], "narayan": [7, 23, 33, 40, 48], "nodar": [7, 23, 33, 40, 48], "gogoberidz": [7, 23, 33, 40, 48], "osman": [7, 23, 33, 40, 48], "salih": [7, 23, 33, 40, 48], "petr": [7, 23, 33, 40, 48], "walczysko": [7, 23, 33, 40, 48], "conrad": [7, 23, 33, 40, 48], "simon": [7, 23, 33, 40, 48], "weyend": [7, 23, 33, 40, 48], "sriram": [7, 23, 33, 40, 48], "sundar": [7, 23, 33, 40, 48], "somasundharam": [7, 23, 33, 40, 48], "suganya": [7, 20, 23, 30, 33, 39, 40, 48], "sivagurunathan": [7, 20, 23, 30, 33, 39, 40, 48], "ugi": [7, 20, 23, 29, 33, 40, 43, 48, 50], "sarkan": [7, 20, 23, 29, 33, 40, 43, 48, 50], "BY": [7, 9, 12, 13, 14, 17, 18, 19, 20, 23, 24, 25, 28, 31, 32, 33, 34, 37, 39, 40, 41, 46, 47, 48, 50], "The": [7, 13, 17, 19, 22, 23, 27, 33, 40, 44, 46, 47, 48, 50, 52], "focus": [7, 9, 23, 32, 33, 40, 41, 48, 50], "introduc": [7, 9, 22, 23, 32, 33, 40, 41, 48], "programmat": [7, 23, 33, 40, 48], "approach": [7, 22, 23, 32, 33, 40, 48], "via": [7, 17, 19, 23, 32, 33, 40, 44, 48, 52], "ran": [7, 23, 33, 40, 48], "olivi": [7, 19, 22, 36, 38, 39, 45, 48], "burri": [7, 19, 22, 36, 38, 39, 45, 48], "neubias_academy_stardist": [7, 19, 22, 36, 38, 39, 45, 48], "deborah": [9, 20, 42], "wayn": [9, 20, 42], "rasband": [9, 20, 42], "pavel": [9, 20, 42], "tomancak": [9, 20, 42], "eugen": [9, 20, 42], "myer": [9, 20, 42], "figshar": [9, 20, 42], "i2k_poster_haase_v6_imagej_repro_pdf": [9, 20, 42], "7409525": [9, 20, 42], "llm": [9, 22, 32, 48], "chang": [9, 22, 27, 32, 48], "wai": [9, 19, 22, 24, 32, 39, 44, 48, 50, 51], "also": [9, 17, 19, 22, 27, 32, 44, 48, 52], "ha": [9, 22, 25, 32, 37, 46, 47, 48, 50], "impact": [9, 22, 32, 48], "commun": [9, 12, 24, 47, 48, 52], "can": [9, 14, 19, 20, 22, 26, 27, 32, 34, 37, 39, 48, 50], "analyz": [9, 17, 19, 20, 22, 32, 42, 44, 48, 52], "biomed": [9, 17, 22, 32, 48, 52], "ask": [9, 22, 32, 48], "prompt": [9, 22, 32, 48], "talk": [9, 22, 32, 48], "outlin": [9, 16, 20, 22, 29, 32, 39, 45, 48, 50], "principl": [9, 14, 22, 23, 24, 32, 33, 37, 39, 40, 48, 50], "explain": [9, 14, 20, 22, 24, 25, 29, 32, 42, 45, 48, 50, 51], "engin": [9, 17, 20, 22, 32, 36, 38, 40, 42, 48], "compar": [9, 22, 23, 32, 48], "differ": [9, 14, 15, 23, 39, 40, 48], "vendor": [9, 22, 32, 48], "perform": [9, 19, 22, 32, 34, 39, 44, 47, 48], "task": [9, 22, 32, 48], "ar": [9, 14, 15, 22, 23, 26, 27, 32, 33, 34, 37, 39, 40, 41, 47, 48], "ahead": [9, 22, 32, 48], "10815329": [9, 22, 32, 48], "scad": [9, 19, 32, 40, 48], "ai": [9, 17, 19, 32, 48, 52], "leipzig": [9, 19, 32, 40, 48], "repositori": [9, 19, 23, 24, 26, 27, 32, 34, 37, 39, 40, 47, 48, 50, 51], "contain": [9, 17, 19, 26, 27, 32, 37, 39, 40, 48, 52], "student": [9, 19, 32, 40, 48], "uni": [9, 17, 19, 20, 32, 40, 42, 46, 48, 50, 52], "who": [9, 19, 32, 40, 48], "want": [9, 19, 27, 32, 40, 48], "dive": [9, 19, 32, 40, 48], "deep": [9, 15, 17, 25, 52], "bid": [9, 19, 32, 40, 48], "2024": [9, 23, 24, 34, 36, 37, 39, 40, 41, 47, 50], "poetsch": [9, 19, 32, 39, 44, 48], "biotec": [9, 19, 32, 39, 44, 48], "marcelo": [9, 11, 19, 32, 38, 39, 44, 48], "leomil": [9, 19, 32, 39, 44, 48], "zoccol": [9, 11, 19, 32, 38, 39, 44, 48], "johann": [9, 19, 20, 24, 29, 32, 36, 38, 39, 44, 48, 50], "richard": [9, 13, 19, 20, 22, 32, 36, 39, 44, 45, 48, 50], "m\u00fcller": [9, 19, 32, 39, 44, 48], "napari": [9, 12, 25, 45, 50], "image_analysis_with_python": [9, 19, 32, 39, 44, 48], "omero": [9, 18, 37], "robert_haas": [9, 11, 32, 47, 48], "browsing_idr": [9, 11, 32, 47, 48], "loic": [9, 14, 19, 20, 29, 34, 39, 42], "royer": [9, 14, 19, 20, 29, 34, 39, 42], "publish": [9, 12, 13, 22, 24, 25, 30, 32, 36, 42, 43, 45, 46, 47, 50, 52], "function": [9, 20, 29, 37, 39, 42], "graphic": [9, 20, 29, 39, 42], "unit": [9, 20, 29, 39, 42], "1038": [9, 14, 19, 20, 29, 34, 39, 42, 43], "019": [9, 20, 29, 39, 42], "0650": [9, 20, 29, 39, 42], "12": [9, 11, 22, 32, 38, 39, 46, 48, 50], "1054": [9, 22, 32, 46, 50], "soltwedel": [9, 19, 20, 32, 39, 48, 50], "common": [9, 14, 20, 23, 24, 25, 28, 32, 39, 41, 45, 50], "reason": [9, 20, 32, 39, 50], "found": [9, 20, 32, 39, 50], "servic": [9, 20, 32, 39, 50], "provid": [9, 14, 17, 20, 22, 32, 36, 37, 39, 42, 50, 52], "fulfil": [9, 20, 32, 39, 50], "certain": [9, 20, 32, 39, 50], "need": [9, 32, 37, 50], "conflict": [9, 20, 23, 32, 33, 39, 41, 50], "interest": [9, 20, 32, 39, 50], "aris": [9, 20, 32, 39, 50], "1111": [9, 10, 17, 20, 32, 39, 42, 50, 52], "jmi": [9, 10, 17, 20, 32, 39, 42, 50, 52], "13192": [9, 20, 32, 39, 50], "version": [9, 11, 32, 50, 51], "control": [9, 11, 19, 30, 32, 39, 50, 51], "09": [9, 11, 32, 50, 51], "In": [9, 19, 22, 23, 26, 27, 32, 34, 39, 44, 47, 48], "current": [9, 20, 23, 29, 32, 33, 41, 50], "potenti": [9, 23, 26, 32, 33, 34, 37, 39, 41, 47, 48, 50], "solut": [9, 23, 33, 34, 39, 41, 47, 48], "openli": [9, 22, 23, 25, 27, 32, 33, 41, 46, 47, 50], "softli": [9, 23, 32], "field": [9, 23, 32], "lot": [9, 23, 32], "circul": [9, 23, 32], "privat": [9, 23, 32], "channel": [9, 23, 32], "reusabl": [9, 22, 23, 25, 32, 37, 46, 47, 50], "accord": [9, 23, 32], "fair": [9, 32, 33, 37, 40], "still": [9, 23, 32], "rare": [9, 23, 32], "publicli": [9, 23, 32], "acess": [9, 23, 32], "propos": [9, 23, 27, 32], "fill": [9, 23, 32], "gap": [9, 23, 32], "10654775": [9, 23, 32], "over": [9, 22, 23, 32, 33, 41, 50, 52], "11066250": [9, 23, 33, 41, 50], "write": [9, 23, 27, 33, 50], "plan": [9, 22, 23, 32, 33], "10970869": [9, 23, 33, 50], "ann": [9, 12, 14, 15, 20, 30, 32, 39, 45], "e": [9, 14, 15, 20, 25, 27, 28, 30, 32, 37, 39, 45, 50], "carpent": [9, 14, 15, 20, 30, 32, 39, 45], "bankhead": [9, 12, 14, 19, 20, 22, 31, 32, 39, 42, 45, 48], "practic": [9, 22, 25, 33, 34, 40, 46, 47], "302": [9, 20, 32, 45], "971": [9, 22, 32, 38, 39, 48], "post": [9, 11, 26, 27, 32, 47, 50, 51], "what": [9, 11, 32, 37, 50], "import": [9, 11, 16, 32, 50], "itll": [9, 11, 32, 50], "rhaas": [9, 22, 31, 39, 42, 45], "lecture_imagej2_dev": [9, 22, 31, 39, 42, 45], "benoit": [9, 22, 36, 39, 42], "lombardot": [9, 22, 36, 39, 42], "nc": [9, 14, 25, 39, 42], "mpicbg": [9, 39, 42], "scicomp": [9, 22, 36, 39, 42], "courseintrotoia": [9, 39, 42], "bioimage_team": [9, 22, 36, 39, 42], "coursematerialimageanalysi": [9, 22, 36, 39, 42], "tree": [9, 22, 36, 39, 42], "master": [9, 22, 36, 38, 39, 42], "imagejmacro_24h_2017": [9, 22, 36, 39, 42], "pr": [9, 23, 33, 41, 50], "solv": [9, 23, 33, 41, 50], "merg": [9, 23, 27, 33, 41, 50], "upload": [9, 23, 33, 34, 39, 41, 47, 48, 50], "10972692": [9, 23, 33, 41, 50], "other": [9, 22, 27, 37, 39, 42], "exercis": [9, 23, 24, 30, 40, 41, 42, 50], "cmcb": [9, 22, 39, 42], "tu": [9, 28, 36, 37, 39, 42], "lecture_applied_bioimage_analysi": [9, 22, 39, 42], "08": [9, 11, 22, 32, 46, 48, 50], "anjali": [9, 20, 32, 39], "schlaeppi": [9, 20, 32, 39], "wilson": [9, 20, 32, 39], "huisken": [9, 20, 32, 39], "macdonald": [9, 20, 32, 39], "elisabeth": [9, 11, 20, 32, 39, 50, 51], "kugler": [9, 11, 20, 32, 39, 50, 51], "frontiersin": [9, 20, 32, 39], "3389": [9, 20, 32, 39], "fbinf": [9, 20, 32, 39], "889755": [9, 20, 32, 39], "session": [9, 22, 31, 32, 39, 42, 45], "multiview": [9, 22, 31, 39, 42, 45], "lecture_multiview_registr": [9, 22, 31, 39, 42, 45], "access": [9, 14, 15, 17, 23, 27, 33, 37, 39, 40, 41, 42, 48, 52], "10990107": [9, 23, 33, 41, 50], "hohlbein": [9, 20, 29], "benedict": [9, 20, 29], "diederich": [9, 20, 29], "barbora": [9, 20, 29], "marsikova": [9, 20, 29], "emmanuel": [9, 20, 29], "reynaud": [9, 20, 29], "s\u00e9amu": [9, 14, 19, 20, 29, 34], "holden": [9, 14, 19, 20, 29, 34], "wiebk": [9, 20, 29], "jahr": [9, 20, 29], "kirti": [9, 20, 29], "prakash": [9, 20, 29], "comment": [9, 20, 29], "state": [9, 20, 29], "art": [9, 20, 28, 29], "hardwar": [9, 20, 29], "context": [9, 20, 27, 29, 37], "022": [9, 17, 20, 29, 42, 52], "01602": [9, 20, 29], "1171": [9, 22, 32], "7490": [9, 22, 32], "1119154": [9, 22, 32], "519": [9, 22, 32, 50, 51], "15": [9, 32, 50, 51], "background": [9, 19, 20, 29, 40, 42, 48], "0004000112": [9, 20, 29, 42], "cell": [9, 13, 19, 22, 31, 40, 42, 45, 48], "lecture_tracking_trackm": [9, 22, 31, 39, 42, 45], "lecture_working_with_objects_in_2d_and_3d": [9, 22, 31, 39, 42, 45], "lecture_working_with_pixel": [9, 22, 31, 39, 42, 45], "tom": [10, 17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "boissonnet": [10, 17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "dohl": [10, 20, 22, 25, 32, 46, 47, 50], "karen": [10, 20, 46, 50], "bernhardt": [10, 20, 46, 50], "tobia": [10, 20, 50], "wernet": [10, 20, 50], "13317": [10, 20, 50], "h\u00e4nsch": [10, 20, 29, 43, 50], "01288": [10, 20, 29, 43, 50], "z": [10, 20, 28, 29, 43, 50], "hensel": [10, 20, 46, 50], "unclear": [10, 20, 46, 50], "1515": [10, 20, 46, 50], "hsz": [10, 20, 46, 50], "0304": [10, 20, 46, 50], "7018929": [10, 25, 32, 46, 50], "mara": [11, 32, 39, 44, 48], "lampert": [11, 32, 39, 44, 48], "introduct": [11, 23, 33, 41, 44, 46, 50, 51], "reproduc": [11, 17, 23, 33, 39, 40, 41, 47, 48, 50, 51], "job": [11, 50], "fermi": [11, 50], "delmic": [11, 50], "jennif": [11, 50], "water": [11, 50], "datamanag": [11, 50], "hm": [11, 50], "harvard": [11, 50], "edu": [11, 50], "new": [11, 27, 50], "marcelo_zoccol": [11, 32, 38, 39, 48], "omero_script": [11, 32, 38, 39, 48], "07": [11, 50, 51], "26": [11, 50, 51], "haesleinhuepf": [12, 19, 31, 39, 48], "bioimageanalysisnotebook": [12, 19, 31, 39, 48], "intro": [12, 18, 19, 31, 32, 39, 45, 48, 50], "bornholdt": [12, 36, 38, 39], "juan": [12, 19, 30, 36, 38, 39, 48], "caicedo": [12, 36, 38, 39], "yu": [12, 24, 36, 38, 39], "han": [12, 36, 38, 39], "nikita": [12, 36, 38, 39], "moshkov": [12, 36, 38, 39], "rebecca": [12, 14, 20, 31, 36, 38, 39], "senft": [12, 14, 20, 31, 36, 38, 39], "cytomin": [12, 36, 38, 39], "00": [12, 36, 38, 39], "welcom": [12, 27, 36, 37, 38, 39], "becker": [12, 39], "shantanu": [12, 39], "singh": [12, 39], "gregori": [12, 39], "hamdah": [12, 39], "abbasi": [12, 39], "callum": [12, 39], "troman": [12, 39], "coia": [12, 39], "cc0": [12, 14, 15, 19, 39, 40, 42], "pete": [12, 19, 32, 39, 42, 48], "imagej": [12, 16, 19, 29, 31, 32, 48], "bioimagebook": [12, 19, 32, 39, 42, 48], "index": [12, 19, 32, 37, 42, 48], "kevinyamauchi": [12, 17, 19, 32, 39, 44, 45, 48, 50], "scienceeurop": [12, 32], "our": [12, 27, 37], "5281": [12, 13, 22, 25, 32, 38, 39, 46, 47, 50, 52], "4915861": [12, 32], "rougier": [12, 48], "nd": [12, 14, 19, 25, 32, 39, 44, 48], "sa": [12, 14, 20, 39, 44, 46, 48, 50], "inria": [12, 48], "hal": [12, 48], "03427242": [12, 48], "document": [12, 18, 20, 27, 38, 42, 46, 50], "wheeler": 12, "editor": 12, "ricardo": [12, 14, 19, 34], "henriqu": [12, 14, 19, 34], "en": [12, 14, 16, 17, 36, 47, 48, 52], "3a": 12, "9781119096900": 12, "stephen": [12, 13, 17, 19, 20, 39, 42, 52], "royl": [12, 13, 39], "cshlpress": [12, 39], "default": [12, 39], "tpl": [12, 39], "cart": [12, 39], "1700309488232283050": [12, 39], "fromlink": [12, 39], "linkact": [12, 39], "linksortbi": [12, 39], "oop_titl": [12, 39], "eqskudatarq": [12, 39], "1282": [12, 39], "cover": [12, 34], "topic": [12, 27, 34, 36, 39], "relat": [12, 27, 34, 37], "skill": [12, 22, 32, 34], "tool": [12, 17, 22, 23, 25, 33, 34, 40, 41, 45, 48, 52], "best": [12, 22, 25, 32, 34, 46, 47, 50], "netlifi": [12, 24, 34, 50, 51], "app": [12, 24, 34, 50, 51], "biernacka": [12, 16, 32, 50], "katarzyna": [12, 16, 32, 50], "bierwirth": [12, 32, 50], "maik": [12, 32, 50], "buchholz": [12, 14, 19, 32, 34, 50], "petra": [12, 32, 50], "dolzycka": [12, 32, 50], "dominika": [12, 32, 50], "helbig": [12, 16, 32, 50], "kerstin": [12, 16, 32, 50], "neumann": [12, 32, 50], "janna": [12, 32, 50], "odebrecht": [12, 32, 50], "carolin": [12, 32, 50], "wilj": [12, 32, 50], "cord": [12, 32, 50], "wuttk": [12, 32, 50], "materi": [12, 26, 27, 33, 40, 41, 42], "from": [12, 24, 29, 34, 41, 46, 47, 48, 50], "fdmentor": [12, 32, 50], "4071471": [12, 32, 50], "semest": [13, 24, 34], "biologi": [13, 14, 24, 25, 34], "ahklemm": [13, 22, 36, 39, 45], "imagejmacro_introduct": [13, 22, 36, 39, 45], "assaf": [13, 19, 22, 36, 39, 45], "zaritski": [13, 19, 22, 36, 39, 45], "csaba": [13, 19, 22, 36, 39, 45], "molnar": [13, 19, 22, 36, 39, 45], "vasja": [13, 19, 22, 36, 39, 45], "urbanc": [13, 19, 22, 36, 39, 45], "butler": [13, 19, 22, 36, 39, 45], "vannari": [13, 19, 22, 36, 39, 45], "mea": [13, 19, 22, 36, 39, 45], "yedid": [13, 19, 22, 36, 39, 45], "neubias_analystschool2018": [13, 19, 22, 36, 39, 45], "janeliascicomp": [13, 24, 36], "nf": [13, 14, 36, 48], "karin": [13, 14, 19, 34, 36, 48], "sasaki": [13, 19, 36, 48], "karinsasaki": [13, 19, 36, 48], "marionlouveaux": [13, 36, 39, 45], "neubias2018_ts7": [13, 36, 39, 45], "17": [13, 22, 32, 39, 52], "gpl": [13, 14, 19, 39, 44, 48], "digit": [13, 17, 20, 42, 52], "2643411": [13, 39], "barbara": [14, 20, 31], "diaz": [14, 20, 31], "rohrer": [14, 20, 31], "pina": [14, 20, 31], "colarusso": [14, 20, 31], "luci": [14, 20, 31], "swift": [14, 20, 31], "nasim": [14, 20, 30, 31, 39], "jamali": [14, 20, 30, 31, 39], "thoma": [14, 20, 22, 25, 29, 30, 31, 32, 39, 43, 46, 47, 50], "pengo": [14, 20, 31, 43], "craig": [14, 17, 20, 31, 40, 48, 52], "brideau": [14, 20, 31], "virgini": [14, 20, 31], "uhlmann": [14, 20, 31], "kirk": [14, 20, 31], "andrew": [14, 20, 31], "gonzal": [14, 20, 31], "edward": [14, 20, 31], "l": [14, 15, 19, 20, 22, 25, 30, 31, 32, 34, 39, 46, 47, 50], "evan": [14, 20, 22, 31, 32, 52], "iii": [14, 20, 31], "1371": [14, 20, 31], "journal": [14, 20, 31], "pbio": [14, 20, 31], "3002167": [14, 20, 31], "bioimagingguid": [14, 20, 31], "vebjorn": [14, 15], "ljosa": [14, 15], "katherin": [14, 15], "sokolnicki": [14, 15], "broad": [14, 15, 22, 25, 32, 46, 47, 50], "benchmark": [14, 15], "bbbc": [14, 15], "nmeth": [14, 15, 20], "2083": [14, 15], "broadinstitut": [14, 15], "watch": [14, 25, 39, 48, 50], "v": [14, 25, 39, 48, 50], "2dbkuwkk4": [14, 25, 39], "pl5esqnfm5lc7samsteu082ivw4bdmvd0u": [14, 25, 39], "licenc": [14, 15, 39, 40], "avail": [14, 15, 22, 25, 26, 39, 40, 46, 47, 50], "under": [14, 15, 37, 39, 40], "so": [14, 15, 37, 39, 40], "indic": [14, 15, 39, 40], "attribut": [14, 15, 23, 24, 25, 39, 40, 41, 50], "visualis": [14, 15, 39], "vem": [14, 15, 39], "odc": [14, 39], "biii": [14, 39], "eu": [14, 17, 20, 36, 38, 39, 52], "publict": [14, 15], "sciencedirect": [14, 15], "ab": [14, 15, 20, 39], "pii": [14, 15], "s0022283622000791": [14, 15], "fabrizio": [14, 39, 44, 48], "musacchio": [14, 39, 44, 48], "fabriziomusacchio": [14, 39, 44, 48], "teaching_bioimage_analysi": [14, 39, 44, 48], "cobacenterforopenbioimagea1864": [14, 25, 39], "eoss": [14, 22, 32, 39], "celltrackingchalleng": [14, 15, 36, 39], "net": [14, 15, 16, 36, 39], "20": [14, 19, 34], "563252v2": [14, 19, 34], "guijacquemet": [14, 19, 34], "celltrackscolab": [14, 19, 34], "zmb": 14, "dozuki": 14, "image_analysi": 14, "chrishavlin": [14, 25, 36, 39, 44, 48], "playlist": [14, 22, 25, 29, 32, 36, 39, 44, 46, 47, 48, 50], "plqbhamyzu5kxuacnnbixybkivueikswq1": [14, 25, 36, 39, 44, 48], "sreeni": [14, 25, 48], "bhattiprolu": [14, 19, 25, 36, 39, 48], "gener": [14, 25, 47], "process": [14, 25], "machin": [14, 25], "a4po9z61tm": [14, 25, 48], "eurobioimagingcommun": [14, 25], "isabel": [14, 20, 23, 24, 39, 41, 50], "kemmer": [14, 20, 23, 24, 39, 41, 50], "creativ": [14, 23, 24, 25, 28, 39, 41, 50], "intern": [14, 18, 23, 24, 25, 39, 41, 50], "dmp": [14, 24, 39, 41, 50], "question": [14, 22, 24, 32, 39, 41, 50], "tailor": [14, 22, 24, 25, 32, 39, 41, 46, 47, 50], "11473803": [14, 24, 39, 41, 50], "8zd4kty": [14, 25, 39, 50], "oyi": [14, 25, 39, 50], "plw": [14, 25, 39, 50], "oxncaxrqu4xqdujzwfhvwlf06pvdvm": [14, 25, 39, 50], "pl5edc1v41fyclfzbbclo41zfo": [14, 25, 39], "_cxbfab": [14, 25, 39], "domain": [14, 50], "inform": [14, 19, 22, 25, 32, 46, 47, 48, 50], "portal": [14, 50], "german": [14, 32, 36, 37, 50], "wiki": [14, 32, 50], "scientif": [14, 17], "compani": [14, 36], "gmb": [14, 36, 50], "globalbioimag": [14, 18, 25, 39], "i3dbio": [14, 22, 25, 32, 36, 46, 47, 50], "mat": [14, 36, 50], "bioimagelist": [14, 36, 50], "deed": [14, 25, 39], "idr": [14, 15, 20, 25, 47], "openmicroscopi": [14, 15, 17, 18, 20, 32, 47, 50], "4326": [14, 15, 20], "oxinst": [14, 25, 29, 39], "user": [14, 52], "melbourneadvancedmicroscop2617": [14, 25, 39], "webinar": [14, 25, 45, 47], "where": [14, 22, 25, 32, 45, 46, 47, 50], "author": [14, 25, 26, 27, 45], "softwar": [14, 17, 19, 25, 27, 44, 46, 47, 48, 52], "effort": [14, 48], "pipelin": [14, 20, 42], "built": [14, 48], "co": [14, 48], "re": [14, 27, 48], "2": [14, 16, 19, 22, 39, 45, 47, 48], "readthedoc": [14, 16, 17, 36, 47, 48, 52], "latest": [14, 16, 47], "next": [14, 25, 27, 47], "file": [14, 22, 24, 25, 26, 27, 36, 39, 47, 51], "format": [14, 23, 25, 27, 47], "ngff": [14, 25, 47], "platform": [14, 17, 22, 25, 32, 46, 47, 48, 50, 52], "plugin": [14, 16, 17, 19, 25, 42, 44, 47, 48, 52], "openmicroscopyenviron": [14, 25, 47], "sreeniva": [14, 19, 36, 39, 48], "bnsreenu": [14, 19, 36, 39, 48], "python_for_microscopist": [14, 19, 36, 39, 48], "arhnhk07t3q": [14, 25], "plycntv": [14, 25], "ubvujf7wausq5q7v7pi1vepi1": [14, 25], "elixir": [14, 18, 32, 36, 50], "europ": [14, 18, 32, 36, 50], "all_training_resourc": [14, 32, 50], "zeissmicroscopi": [14, 19, 39, 44, 48], "zen_python_oad_workshop": [14, 19, 39, 44, 48], "von": [14, 19, 28, 34], "chamier": [14, 19, 34], "f": [14, 17, 18, 19, 20, 32, 34, 46, 47, 48, 50], "lain": [14, 19, 34], "jukkala": [14, 19, 34], "spahn": [14, 19, 34], "krentzel": [14, 19, 34], "elia": [14, 19, 34], "nehm": [14, 19, 34], "martina": [14, 19, 34], "lerch": [14, 19, 34], "sara": [14, 19, 34], "hern\u00e1ndez": [14, 19, 34], "p\u00e9rez": [14, 19, 34], "pieta": [14, 19, 34], "mattila": [14, 19, 34], "eleni": [14, 19, 34], "ahmet": [14, 19, 34], "solak": [14, 19, 34], "alexand": [14, 19, 34], "krull": [14, 19, 34], "alain": [14, 19, 34], "leterri": [14, 19, 34], "yoav": [14, 19, 34], "shechtman": [14, 19, 34], "mike": [14, 19, 34], "heilemann": [14, 19, 34], "s41467": [14, 19, 34], "22518": [14, 19, 34], "plrc9dt9lezh_svrc4g5moovghuvjpwmv0": [14, 25, 29, 39], "searchabl": [14, 29], "light": [14, 29], "electron": [14, 29], "learn": [15, 17, 25, 29, 52], "scienc": 15, "cortez": [16, 32, 50], "katrin": [16, 32, 50], "singl": [16, 32, 50], "most": [16, 32, 50], "level": [16, 32, 50], "3490058": [16, 32, 50], "regeringen": [16, 50], "se": [16, 22, 39, 45, 50], "contentasset": [16, 50], "55e7d8fbf6df4a54ac56942b98d94e4f": [16, 50], "pa": [16, 50], "engelska": [16, 50], "guid": [16, 19, 22, 25, 27, 30, 46], "example_facility_manag": [16, 47], "fuster": [17, 36, 38, 52], "barcel\u00f3": [17, 36, 38, 52], "eurobioimag": [17, 20, 36, 38, 52], "franco": [17, 48, 52], "barranco": [17, 48, 52], "open": [17, 40, 42, 46, 52], "sourc": [17, 23, 25, 33, 40, 41, 42, 44, 46, 47, 48, 52], "librari": [17, 19, 32, 44, 48, 52], "build": [17, 48, 52], "call": [17, 48, 52], "nanguag": [17, 40, 48, 52], "jeremi": [17, 20, 36, 38, 40, 48, 52], "metz": [17, 20, 36, 38, 40, 48, 52], "russel": [17, 40, 48, 52], "design": [17, 22, 32, 40, 48, 52], "flexibl": [17, 40, 48, 52], "deploy": [17, 32, 40, 48, 52], "execut": [17, 40, 48, 52], "model": [17, 20, 23, 33, 40, 41, 52], "api": [17, 40, 48, 52], "rpc": [17, 40, 48, 52], "framework": [17, 42, 52], "high": [17, 48, 52], "scale": [17, 48, 52], "prepar": [17, 22, 25, 32, 46, 47, 48, 50, 52], "interact": [17, 23, 24, 41, 44, 52], "analyt": [17, 19, 40, 48, 52], "web": [17, 52], "intens": [17, 22, 25, 32, 46, 47, 50, 52], "usegalaxi": [17, 52], "ruman": [17, 20, 42, 52], "gerst": [17, 20, 42, 52], "zolt\u00e1n": [17, 20, 42, 52], "cseresny\u00e9": [17, 20, 42, 52], "marc": [17, 20, 42, 52], "thilo": [17, 20, 42, 52], "figg": [17, 20, 42, 52], "program": [17, 20, 52], "languag": [17, 20, 42, 52], "easi": [17, 20, 42, 52], "develop": [17, 22, 24, 41, 42, 50, 52], "01744": [17, 20, 42, 52], "hki": [17, 20, 42, 52], "jena": [17, 20, 42, 52], "how_to": [17, 32, 48], "conda_forge_packag": [17, 32, 48], "birgit": [17, 20, 42, 52], "m\u00f6ller": [17, 20, 42, 52], "marku": [17, 20, 42, 52], "gla\u00df": [17, 20, 42, 52], "danni": [17, 20, 42, 52], "misiak": [17, 20, 42, 52], "stefan": [17, 20, 42, 52], "posch": [17, 20, 42, 52], "microscop": [17, 20, 42, 52], "algorithm": [17, 20, 39, 42, 52], "openresearchsoftwar": [17, 20, 42, 52], "metajnl": [17, 20, 42, 52], "5334": [17, 20, 42, 52], "jor": [17, 20, 42, 52], "103": [17, 20, 42, 52], "informatik": [17, 20, 42, 52], "hall": [17, 20, 42, 52], "cross": [17, 19, 20, 39, 42, 52], "jordan": [17, 20, 22, 32, 42, 52], "fisher": [17, 20, 42, 52], "mark": [17, 19, 20, 39, 42, 43, 48, 52], "jepson": [17, 20, 42, 52], "modular": [17, 20, 42, 52], "13227": [17, 20, 42, 52], "mianalysi": [17, 20, 42, 52], "moham": [17, 18, 20, 32, 46, 47, 48, 50], "m": [17, 18, 20, 32, 43, 46, 47, 48, 50], "abdrabb": [17, 18, 20, 32, 46, 47, 48, 50], "mehrnaz": [17, 18, 20, 32, 46, 47, 48, 50], "babaki": [17, 18, 20, 32, 46, 47, 48, 50], "michel": [17, 18, 20, 22, 25, 32, 43, 46, 47, 48, 50], "bortolomeazzi": [17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "eik": [17, 18, 20, 32, 46, 47, 48, 50], "dahm": [17, 18, 20, 32, 46, 47, 48, 50], "vanessa": [17, 18, 20, 32, 46, 47, 48, 50], "fuch": [17, 18, 20, 32, 46, 47, 48, 50], "hoevel": [17, 18, 20, 32, 46, 47, 48, 50], "niraj": [17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "kandpal": [17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "m\u00f6hl": [17, 18, 20, 32, 46, 47, 48, 50], "joshua": [17, 18, 20, 32, 46, 47, 48, 50], "astrid": [17, 18, 20, 32, 46, 47, 48, 50], "schauss": [17, 18, 20, 32, 46, 47, 48, 50], "andrea": [17, 18, 20, 32, 46, 47, 48, 50], "schrader": [17, 18, 20, 32, 46, 47, 48, 50], "torsten": [17, 18, 20, 32, 46, 47, 48, 50], "st\u00f6ter": [17, 18, 20, 32, 46, 47, 48, 50], "th\u00f6nni\u00dfen": [17, 18, 20, 32, 46, 47, 48, 50], "monica": [17, 18, 20, 32, 46, 47, 48, 50], "valencia": [17, 18, 20, 32, 46, 47, 48, 50], "luka": [17, 18, 20, 32, 46, 47, 48, 50], "weil": [17, 18, 20, 32, 46, 47, 48, 50], "jen": [17, 18, 19, 20, 29, 32, 39, 46, 47, 48, 50], "wendt": [17, 18, 20, 29, 32, 46, 47, 48, 50], "zenti": [17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "arc": [17, 18, 20, 32, 46, 47, 48, 50], "datapl": [17, 18, 20, 32, 46, 47, 48, 50], "enabl": [17, 22, 32, 52], "scalabl": [17, 48], "stabl": [17, 36, 47, 48, 52], "system": [17, 22, 25, 32, 46, 47, 48, 50, 52], "creat": [17, 24, 25, 27, 46, 47, 48, 50, 51, 52], "analys": [17, 48, 52], "academ": [17, 20, 48, 52], "oup": [17, 20, 48, 52], "28": [17, 48, 52], "19": [17, 37, 48, 52], "2520": [17, 48, 52], "290322": [17, 48, 52], "info": [18, 39], "offic": [18, 39], "bia23": [18, 39], "ts": [18, 19, 32, 39, 48], "track": [18, 19, 32], "witz": [19, 22, 30, 31, 34, 36, 38, 39, 45, 48], "cardona": [19, 39, 42], "syn": [19, 39, 42], "mrc": [19, 39, 42], "lmb": [19, 39, 42], "cam": [19, 39, 42], "acardona": [19, 39, 42], "dresden": [19, 28, 37, 40, 44, 48], "transloc": [19, 30, 39], "pixel": [19, 30], "classif": [19, 30, 39, 40, 48], "qualiti": [19, 30], "herearii": [19, 36, 38, 39], "metuarea": [19, 36, 38, 39], "valentin": [19, 36, 38, 39], "gilet": [19, 36, 38, 39], "hereariim": [19, 36, 38, 39], "agpl": [19, 38, 48], "tpecot": [19, 38, 48], "deeplearningbasedsegmentationforbiologist": [19, 38, 48], "victor": [19, 34, 38, 48], "yurchenko": [19, 34, 38, 48], "fedor": [19, 34, 38, 48], "ratnikov": [19, 34, 38, 48], "viktoriia": [19, 34, 38, 48], "checkalina": [19, 34, 38, 48], "yandexdataschool": [19, 34, 38, 48], "deep_vision_and_graph": [19, 34, 38, 48], "nunez": [19, 30, 39, 48], "iglesia": [19, 30, 39, 48], "jni": [19, 30, 39, 48], "halfwai": [19, 30, 39, 48], "skimag": [19, 30, 39, 48], "aurelien": [19, 39], "barbotin": [19, 39], "cha": [19, 39], "ola": [19, 39], "alexandra": [19, 39], "tarkowska": [19, 39], "mikolaj": [19, 39], "kundegorski": [19, 39], "todd": [19, 39], "fallesen": [19, 39], "daim": [19, 39], "scipi": [19, 30, 39, 48], "costantin": [19, 40, 48], "consist": [19, 40, 48], "show": [19, 34, 39, 40, 47, 48], "applic": [19, 25, 32, 40, 46, 47, 48, 50], "problem": [19, 40, 48], "micro": [19, 40, 48], "aleksej": [19, 36, 48], "zelezniak": [19, 36, 48], "neubias_academy_biapi": [19, 31, 39, 45, 48], "jenkinson": [19, 39, 48], "rittscher": [19, 39, 48], "univers": [19, 22, 25, 46, 47, 50], "oxford": [19, 39, 48], "dtc": [19, 39, 48], "dwaith": [19, 39, 48], "onbi_image_analysi": [19, 39, 48], "stephan": [19, 32, 48], "rigaud": [19, 32, 48], "brian": [19, 32, 48], "northan": [19, 32, 48], "till": [19, 32, 48], "korten": [19, 32, 48], "neringa": [19, 32, 48], "jurenait": [19, 32, 48], "apurv": [19, 32, 48], "deepak": [19, 32, 48], "kulkarni": [19, 32, 48], "steinbach": [19, 32, 48], "stark": [19, 32, 48], "marvin": [19, 32, 48], "host": [19, 32, 48], "symposium": [19, 22, 32, 46, 48, 50], "clesperanto": [19, 32, 48], "quantit": [19, 32, 48], "cshl": [19, 32, 48], "bethac07": [19, 32, 48], "qi_2024_analysis_lab_manu": [19, 32, 48], "we": [19, 22, 25, 26, 27, 34, 37, 39, 44, 46, 47, 48], "explor": [19, 32, 37, 44, 48], "them": [19, 23, 27, 32, 33, 40, 41, 44, 48], "viewer": [19, 32, 44, 48], "done": [19, 32, 44, 48], "pyclesperanto": [19, 32, 44, 48], "apoc": [19, 32, 44, 48], "conveni": [19, 32, 44, 48], "altern": [19, 32, 44, 48], "especi": [19, 32, 44, 48], "assist": [19, 32, 44, 48], "flim": [19, 32, 44, 48], "phasor": [19, 32, 44, 48], "plotter": [19, 32, 44, 48], "qm_course_bio_image_analysis_with_napari_202": [19, 32, 44, 48], "ellen": [20, 30, 39], "dobson": [20, 30, 39], "1017": [20, 30, 39], "s2633903x21000039": [20, 30, 39], "ciminilab": [20, 30, 39], "2021_jamali_biologicalimag": [20, 30, 39], "ellenberg": [20, 50], "barlow": [20, 50], "charl": [20, 50], "cook": [20, 50], "ardan": [20, 50], "patwardhan": [20, 50], "alvi": [20, 50], "brazma": [20, 50], "ewan": [20, 50], "birnei": [20, 50], "018": [20, 50], "0195": [20, 50], "8": [20, 28, 29, 43, 50], "beatriz": [20, 22, 36, 38, 39, 50, 52], "serrano": [20, 22, 36, 38, 39, 50, 52], "solano": [20, 22, 36, 38, 39, 50, 52], "bioeng": [20, 36, 38, 52], "run": [20, 23, 27, 36, 44, 52], "zoo": [20, 23, 33, 40, 41, 52], "ai4lif": 20, "announc": [20, 36, 38, 52], "stefania": [20, 30, 39], "marcotti": [20, 30, 39], "carl": [20, 30, 39], "barri": [20, 30, 39], "slater": [20, 30, 39], "543701v1": [20, 30, 39], "coba": [20, 30], "nih": [20, 30, 39], "2023_imageanalysissurvei": [20, 30, 39], "antj": [20, 50], "keppler": [20, 50], "arina": [20, 50], "rybina": [20, 50], "bu\u011fra": [20, 50], "\u00f6zdemir": [20, 50], "ayoub": [20, 50], "el": [20, 50], "ghadraoui": [20, 50], "eriksson": [20, 50], "link": [20, 26, 27, 37], "springer": [20, 50], "1007": [20, 50], "s00418": [20, 50], "02203": [20, 50], "7": [20, 28, 50], "2010": [20, 43], "rupress": [20, 43], "jcb": [20, 43], "189": [20, 43], "5": [20, 43], "777": [20, 43], "35828": [20, 43], "joel": [20, 43], "rigano": [20, 43], "itano": [20, 43], "lisa": [20, 43], "cameron": [20, 43], "guillermo": [20, 43], "marqu\u00e9": [20, 43], "sander": [20, 43], "clair": [20, 43], "brown": [20, 43], "01290": [20, 43], "alessandro": [20, 43], "01315": [20, 43], "ub": [20, 46, 50], "heidelberg": [20, 34, 39, 46, 47, 48, 50], "volltextserv": [20, 46, 50], "29489": [20, 46, 50], "zobel": [20, 22, 25, 29, 32, 46, 47, 50], "sarah": [20, 29, 46, 47, 50], "weischner": [20, 29, 46, 47, 50], "case": [20, 22, 25, 27, 29, 32, 46, 47, 50], "exampl": [20, 27, 29, 34, 39, 46, 48, 50], "m\u00fcnster": [20, 29, 46, 47, 50], "network": [20, 29, 46, 47, 50], "0004000267": [20, 29, 46, 47, 50], "dan": 20, "chitwood": 20, "sourabh": 20, "paland": 20, "plcell": 20, "34": 20, "e1": 20, "6628764": 20, "plantsandpython": 20, "00_opening_pag": 20, "glyn": [20, 32], "quareo": [20, 32], "13041": [20, 32], "01166": [20, 29, 43, 50], "work": [20, 27, 29], "annika": [20, 39], "reink": [20, 39], "detail": [20, 27, 39], "arxiv": [20, 39], "2302": [20, 39], "01790v3": [20, 39], "bastien": [22, 39, 45], "volker": [22, 24, 36, 39, 45], "baecker": [22, 39, 45], "pavi": [22, 39, 45], "roccod": [22, 39, 45], "defragmentation_trainingschool_eosc": [22, 39, 45], "life_2022": [22, 39, 45], "cornelia": [22, 32, 46, 50], "wetzker": [22, 32, 46, 50], "short": [22, 32, 46, 50], "technolog": [22, 23, 32, 33, 40, 41, 46, 50], "10083555": [22, 32, 46, 50], "esgomezm": [22, 36, 38, 39], "neubias_chapter_dl_2020": [22, 36, 38, 39], "cellprofiler_introduct": [22, 36, 39, 45], "kari": [22, 32], "kamvar": [22, 32], "zhian": [22, 32], "carpentri": [22, 32], "attende": [22, 32], "through": 22, "three": [22, 32], "stage": [22, 32], "backward": [22, 32], "lesson": [22, 32], "leav": [22, 32], "have": [22, 23, 26, 27, 32, 37], "identifi": [22, 32], "aim": [22, 32, 37], "form": [22, 32], "assess": 22, "mechan": [22, 32], "receiv": [22, 32], "feedback": [22, 32, 37], "4317149": [22, 32], "fortmann": [22, 25, 32, 46, 47, 50], "grote": [22, 25, 32, 46, 47, 50], "carsten": [22, 25, 32, 46, 47, 50], "om": [22, 25], "remot": [22, 25, 32, 46, 47, 50], "allow": [22, 25, 32, 37, 46, 47, 50], "store": [22, 25, 26, 32, 46, 47, 50], "organ": [22, 25, 32, 46, 47, 50], "annot": [22, 25, 32, 46], "microscopi": [22, 37, 41, 44], "becom": [22, 25, 32, 46, 47, 50], "one": [22, 25, 32, 46, 47, 50], "known": [22, 25, 32, 46, 47, 50], "infrastructur": [22, 25, 32, 36, 38, 47, 52], "facilit": [22, 25, 32, 46, 47], "uptak": [22, 25, 32, 46, 47, 50], "rdm": [22, 25, 32, 46, 47, 50], "institut": [22, 25, 46, 47], "sinc": [22, 25, 32, 46, 47, 50, 52], "adopt": [22, 25, 32, 46, 47, 50], "daili": [22, 25, 32, 46, 47, 50], "routin": [22, 25, 32, 46, 47, 50], "requir": [22, 25, 32, 46, 47, 50], "portfolio": [22, 25, 32, 46, 47, 50], "asset": [22, 25, 36, 38, 46, 47, 50], "On": [22, 25, 32, 46, 47, 50], "top": [22, 25, 32, 46, 47, 50], "environ": [22, 46, 50], "consortium": [22, 25, 32, 46, 47, 50], "staff": [22, 25, 32, 46, 47, 50], "often": [22, 25, 32, 37, 46, 47, 50], "addit": [22, 25, 32, 46, 47, 50], "own": [22, 25, 32, 46, 47], "instanc": [22, 25, 32, 34, 39, 46, 47, 48, 50], "experi": [22, 25, 32, 46, 47, 50], "gather": [22, 25, 32, 46, 47, 50], "group": [22, 25, 32, 46, 47, 50], "rdm4mic": [22, 46], "set": [22, 32, 47, 48], "deck": [22, 25, 32, 46, 47, 50], "serv": [22, 25, 27, 32, 46, 47, 50], "basi": [22, 25, 28, 32, 46, 47, 50], "self": [22, 25, 32, 46, 47, 50], "instruct": [22, 25, 32, 37, 46, 47, 50], "manual": [22, 25, 46, 47, 50], "direct": [22, 25, 32, 46, 47, 50], "beginn": [22, 25, 32, 46, 47, 50], "educ": [22, 25, 27, 32, 46, 47, 50], "complement": [22, 25, 32, 46, 47, 50], "exist": [22, 25, 32, 37, 46, 47, 50], "contribut": [22, 25, 32, 46, 47, 50], "8323588": [22, 25, 32, 46, 47, 50], "youtub": [22, 29, 32, 46, 50], "list": [22, 25, 26, 27, 29, 32, 37, 39, 44, 46, 47, 48], "pl2k": [22, 25, 32, 46, 47, 50], "zwpor7shjg1hhdiwlzj0mb_stlu": [22, 25, 32, 46, 47, 50], "1henpidtpht3bc1y26altitahj2c5xcol": [22, 36], "p1": [22, 36], "bj\u00f6rn": [22, 36, 39], "gr\u00fcning": [22, 36, 39], "1wg_4307xmksgfwt3taxmvx2rzig1k0sm1e7saenjqki": [22, 36, 39], "script": 22, "raw": [22, 34, 36, 38, 39, 47, 48], "githubusercont": [22, 36, 38, 39], "spaom2018": [22, 36, 38, 39], "machinelearning_spaomworkshop_publ": [22, 36, 38, 39], "1ojoy9ghmuusmuwckps_injf_wzazmllunvk1fueb4pa": [22, 36, 38, 39, 45], "ge3a24e733b_0_54": [22, 36, 38, 39, 45], "floden": [22, 32, 52], "di": [22, 28, 32, 52], "tommaso": [22, 32, 52], "paolo": [22, 32, 52], "priorit": [22, 32, 52], "portabl": [22, 32, 52], "seamlessli": [22, 32, 52], "genom": [22, 32, 52], "hpc": [22, 32, 52], "cluster": [22, 28, 32, 37, 52], "major": [22, 32, 52], "back": [22, 32, 52], "fast": [22, 32, 52], "grow": [22, 32, 52], "ecosystem": [22, 32, 52], "made": [22, 32, 52], "up": [22, 32], "across": [22, 32, 52], "academia": [22, 32, 52], "govern": [22, 32, 52], "industri": [22, 32, 52], "count": [22, 32, 52], "1m": [22, 32, 52], "download": [22, 32, 52], "10k": [22, 32, 52], "worldwid": [22, 32, 52], "4334697": [22, 32, 52], "czi": [22, 32, 39], "decemb": [22, 32, 39], "4328911": [22, 32, 39], "della": [22, 32, 50], "chiesa": [22, 32, 50], "stefano": [22, 32, 50], "6602101": [22, 32, 50], "31": [22, 32, 46, 50], "given": [22, 32, 36, 39, 46, 50], "pol": [22, 46, 50], "8329306": [22, 32, 46, 50], "zidas2020_intro_dl": [22, 36, 38, 39], "4330625": [22, 32, 38, 39], "challeng": [23, 33, 41, 48], "workshop": [23, 24, 41, 47], "11474407": [23, 24, 39, 41, 50], "dataset": [23, 40, 47, 50], "11109616": [23, 47, 50], "furthermor": [23, 33, 40, 41], "deploi": [23, 33, 40, 41], "deepimagej": [23, 33, 40, 41], "easili": [23, 33, 40, 41], "evalu": [23, 33, 40, 41], "zerocostdl4m": [23, 33, 40, 41], "deepbac": [23, 33, 40, 41], "ensur": [23, 33, 40, 41], "dl4miceverywher": [23, 33, 40, 41], "manner": [23, 33, 40, 41], "147": [23, 33, 40, 41], "galaxyproject": [23, 24, 34], "sobolewski": [23, 44], "jax": [23, 44], "spring": [23, 44], "thejacksonlaboratori": [23, 44], "section": [23, 44], "cours": [23, 29, 33, 40, 47], "i": [23, 32], "introducemi": [23, 32], "person": [23, 32], "audienc": [23, 32], "10679054": [23, 32], "hugger": [24, 36, 38], "qin": [24, 36, 38], "holgerhennig": [24, 36, 39], "automat": [24, 27, 37, 50, 51], "integr": [24, 50, 51], "share": [24, 40], "cite": [24, 50, 51], "coderefineri": [24, 50, 51], "without": [24, 50, 51], "command": [24, 50, 51], "line": [24, 50, 51], "hilsenstein": [24, 36], "volkerh": [24, 36], "jupyt": [24, 32, 37, 44], "ad": [24, 27, 37, 50, 51], "ture": [24, 50, 51], "2020aprilgitcours": [24, 36], "rafael": [24, 34, 39, 48], "camacho": [24, 34, 39, 48], "camachodejai": [24, 34, 39, 48], "oh3vki7era": 25, "object": [25, 32, 46, 47, 50], "core": [25, 47], "simpl": [26, 34, 39, 47, 48], "These": 26, "structur": 26, "like": [26, 27, 37], "name": [26, 28], "websit": 26, "url": 26, "entri": [26, 27], "multipl": 26, "properti": 26, "mandatori": 26, "descript": 26, "titl": 26, "must": 26, "internet": [26, 28], "etc": 26, "could": [26, 37], "more": 26, "option": 26, "recommend": 26, "publication_d": 26, "extens": [26, 27], "just": [26, 27], "let": [26, 27], "know": [26, 27], "issu": [26, 27, 37], "kind": [26, 37], "you": [26, 27, 37], "would": [26, 27], "add": [26, 27], "here": [26, 27], "pull": 27, "request": 27, "find": [27, 37], "bottom": 27, "page": [27, 37], "If": 27, "too": 27, "busi": 27, "enter": [27, 37], "everyth": 27, "yourself": 27, "pleas": 27, "includ": 27, "take": 27, "your": [27, 37], "favorit": [27, 37], "individu": 27, "howev": 27, "think": 27, "particlar": 27, "valuabl": 27, "feel": 27, "free": 27, "now": 27, "relev": 27, "particular": 27, "limit": 27, "imag": [27, 37], "variou": 27, "onli": 27, "except": 27, "locat": 27, "behind": 27, "paywal": 27, "advertis": 27, "commerci": 27, "product": 27, "remov": 27, "modifi": 27, "ani": [27, 37], "point": 27, "time": [27, 37], "got": 27, "yml": 27, "click": 27, "button": 27, "modif": 27, "veri": [27, 37], "end": 27, "save": 27, "meaning": 27, "commit": 27, "messag": 27, "submit": 27, "why": 27, "after": 27, "wait": 27, "second": 27, "while": 27, "test": 27, "until": 27, "pass": 27, "don": 27, "check": 27, "error": 27, "branch": 27, "again": 27, "care": 27, "substanti": 27, "send": 27, "dr": 28, "rer": 28, "medic": 28, "dfg": [28, 37], "excel": [28, 37], "physic": [28, 37], "life": [28, 37], "arnoldstrass": 28, "18": 28, "01307": 28, "telefon": 28, "49": 28, "351": 28, "463": 28, "40315": 28, "mail": 28, "die": 28, "unser": 28, "seiten": 28, "wurden": 28, "gr\u00f6\u00dfter": 28, "sorgfalt": 28, "erstellt": 28, "richtigkeit": 28, "vollst\u00e4ndigkeit": 28, "und": 28, "aktualit\u00e4t": 28, "der": 28, "k\u00f6nnen": 28, "wir": 28, "jedoch": 28, "kein": 28, "gew\u00e4hr": 28, "\u00fcbernehmen": 28, "diensteanbiet": 28, "sind": 28, "eigen": 28, "auf": 28, "diesen": 28, "allgemeinen": 28, "gesetzen": 28, "bi": 28, "nicht": 28, "verpflichtet": 28, "\u00fcbermittelt": 28, "oder": 28, "gespeichert": 28, "fremd": 28, "informationen": 28, "zu": 28, "\u00fcberwachen": 28, "umst\u00e4nden": 28, "forschen": 28, "ein": 28, "rechtswidrig": 28, "t\u00e4tigkeit": 28, "hinweisen": 28, "verpflichtungen": 28, "zur": 28, "entfernung": 28, "sperrung": 28, "nutzung": 28, "bleiben": 28, "hiervon": 28, "unber\u00fchrt": 28, "diesbez\u00fcglich": 28, "ist": 28, "erst": 28, "dem": 28, "zeitpunkt": 28, "kenntni": 28, "einer": 28, "konkreten": 28, "rechtsverletzung": 28, "m\u00f6glich": 28, "bei": 28, "bekanntwerden": 28, "entsprechenden": 28, "rechtsverletzungen": 28, "werden": 28, "dies": 28, "umgehend": 28, "entfernen": 28, "angebot": 28, "enth\u00e4lt": 28, "externen": 28, "webseiten": 28, "dritter": 28, "deren": 28, "keinen": 28, "einfluss": 28, "haben": 28, "deshalb": 28, "fremden": 28, "auch": 28, "verlinkten": 28, "stet": 28, "jeweilig": 28, "anbiet": 28, "betreib": 28, "zum": 28, "verlinkung": 28, "rechtsverst\u00f6\u00df": 28, "\u00fcberpr\u00fcft": 28, "waren": 28, "erkennbar": 28, "permanent": 28, "inhaltlich": 28, "kontrol": 28, "ohn": 28, "konkret": 28, "anhaltspunkt": 28, "zumutbar": 28, "derartig": 28, "durch": 28, "seitenbetreib": 28, "erstellten": 28, "werk": 28, "unterliegen": 28, "deutschen": 28, "vervielf\u00e4ltigung": 28, "bearbeitung": 28, "verbreitung": 28, "jede": 28, "verwertung": 28, "au\u00dferhalb": 28, "grenzen": 28, "gestattet": 28, "unter": 28, "einhaltung": 28, "lizenzbedingungen": 28, "lizenz": 28, "soweit": 28, "dieser": 28, "seit": 28, "vom": 28, "beachtet": 28, "insbesonder": 28, "solch": 28, "gekennzeichnet": 28, "sollten": 28, "sie": 28, "trotzdem": 28, "urheberrechtsverletzung": 28, "aufmerksam": 28, "bitten": 28, "um": 28, "einen": 28, "hinwei": 28, "webseit": 28, "regel": 28, "angab": 28, "personenbezogen": 28, "daten": 28, "unseren": 28, "beispielsweis": 28, "anschrift": 28, "email": 28, "adressen": 28, "erhoben": 28, "erfolgt": 28, "freiwillig": 28, "ihr": 28, "ausdr\u00fccklich": 28, "zustimmung": 28, "dritt": 28, "weitergegeben": 28, "weisen": 28, "darauf": 28, "hin": 28, "dass": 28, "daten\u00fcbertragung": 28, "im": 28, "kommunik": 28, "per": 28, "sicherheitsl\u00fccken": 28, "aufweisen": 28, "kann": 28, "l\u00fcckenlos": 28, "schutz": 28, "vor": 28, "zugriff": 28, "rahmen": 28, "impressumspflicht": 28, "ver\u00f6ffentlichten": 28, "kontaktdaten": 28, "\u00fcbersendung": 28, "angefordert": 28, "werbung": 28, "informationsmaterialien": 28, "wird": 28, "hiermit": 28, "widersprochen": 28, "behalten": 28, "sich": 28, "rechtlich": 28, "schritt": 28, "fall": 28, "unverlangten": 28, "zusendung": 28, "werbeinformationen": 28, "etwa": 28, "spam": 28, "2020": [29, 52], "edx": [29, 39], "ecol": [29, 39], "polytechniqu": [29, 39], "federal": [29, 39], "lausann": [29, 39], "databas": [29, 37], "microscopist": 29, "segment": [30, 32, 34, 40, 47], "i2k": 30, "mpi": [31, 45], "cbg": [31, 45], "lectur": [31, 40, 45, 46, 47, 50], "appli": [32, 48], "dask": 32, "visual": [32, 44], "numpi": 34, "riccardo": [34, 39, 47, 48], "massei": [34, 39, 47, 48], "13th": [34, 39, 47, 48], "modul": [34, 39, 47, 48], "45": [34, 39, 47, 48], "pm": [34, 39, 47, 48], "main": [34, 39, 47, 48], "goal": [34, 39, 47, 48], "workflow": [34, 40, 48], "jn": [34, 39, 47, 48], "connect": [34, 39, 47, 48], "nuclei": [34, 47], "rmassei": [34, 39, 47, 48], "anirban": [36, 39], "rai": [36, 39], "dl4mia": [36, 39], "seminar": [36, 39], "1ppvuumi5w2ojw_sabzsqvaxuuiktq7ma": [36, 39], "256": 37, "been": 37, "updat": 37, "preliminari": 37, "experiment": 37, "search": 37, "look": 37, "follow": 37, "releas": 37, "earli": 37, "prototyp": 37, "inject": 37, "findabl": 37, "interoper": 37, "bar": 37, "left": 37, "term": 37, "make": 37, "sure": 37, "correspond": 37, "unless": 37, "mention": 37, "otherwis": 37, "fund": 37, "deutsch": 37, "forschungsgemeinschaft": 37, "foundat": 37, "nation": 37, "infrasstructur": 37, "nfdi": 37, "46": 37, "501864659": 37, "support": 37, "strategi": 37, "exc2068": 37, "dtl": [39, 50], "nl": [39, 50], "byod": [39, 50], "comput": 40, "pytorch": 40, "archiv": 46, "forum": 47, "sc": 47, "87925": 47, "gerbi": 50, "joachim": 51, "goedhart": 51, "561479v1": 51, "cloud": 52, "local": 52}, "objects": {}, "objtypes": {}, "objnames": {}, "titleterms": {"christian": 0, "tischer": 0, "11": [0, 5], "A": [0, 4, 9, 10, 11, 12, 14, 17, 19, 20, 30, 31, 32, 39, 42, 46, 50, 51, 52], "hitchhik": [0, 9, 20, 32, 39], "s": [0, 9, 14, 20, 22, 24, 25, 31, 32, 36, 38, 39, 46, 47, 50], "guid": [0, 9, 10, 11, 12, 14, 20, 23, 24, 31, 32, 34, 39, 41, 47, 50, 51], "through": [0, 9, 20, 23, 32, 39], "bio": [0, 9, 11, 14, 18, 19, 20, 22, 23, 25, 32, 33, 36, 38, 39, 40, 41, 44, 46, 47, 48, 50, 51], "imag": [0, 1, 2, 3, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 17, 18, 19, 20, 22, 23, 24, 25, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "analysi": [0, 1, 5, 7, 9, 11, 12, 14, 17, 18, 19, 20, 22, 23, 24, 25, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 44, 45, 46, 47, 48, 50, 51, 52], "softwar": [0, 9, 20, 22, 24, 32, 39, 43, 45, 50, 51], "univers": [0, 4, 9, 20, 32, 39, 48], "high": [0, 5, 14, 15, 36], "throughput": [0, 5, 14, 15, 36], "microscopi": [0, 5, 7, 9, 11, 14, 15, 19, 20, 23, 25, 29, 32, 33, 34, 36, 39, 40, 43, 46, 47, 48, 50], "data": [0, 1, 4, 5, 7, 9, 10, 11, 12, 13, 14, 15, 16, 19, 20, 22, 23, 24, 25, 29, 32, 33, 34, 36, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51], "bigdataprocessor2": [0, 20, 32, 39, 50], "free": [0, 14, 19, 20, 32, 34, 39, 50], "open": [0, 4, 9, 11, 12, 14, 19, 20, 22, 23, 25, 29, 32, 33, 34, 39, 41, 44, 45, 47, 48, 50], "sourc": [0, 9, 14, 19, 20, 22, 24, 32, 34, 36, 39, 45, 50], "fiji": [0, 9, 14, 19, 20, 24, 25, 29, 32, 34, 39, 42, 50], "plugin": [0, 20, 32, 39, 50], "inspect": [0, 20, 32, 39, 50], "process": [0, 2, 3, 5, 9, 12, 13, 17, 19, 20, 22, 29, 31, 32, 34, 36, 39, 42, 48, 50, 52], "tb": [0, 20, 32, 39, 50], "size": [0, 20, 32, 39, 50], "cellprofil": [0, 19, 22, 24, 30, 36, 39, 45], "practic": [0, 7, 10, 12, 18, 19, 20, 23, 24, 32, 36, 38, 39, 41, 45, 48, 50, 51], "neubia": [0, 2, 5, 7, 9, 13, 14, 19, 20, 22, 24, 25, 31, 32, 36, 38, 39, 45, 48], "lisbon": [0, 24, 36, 39, 45], "2017": [0, 2, 5, 22, 24, 36, 39, 45], "commun": [0, 4, 5, 10, 11, 14, 20, 22, 25, 29, 30, 32, 36, 39, 43, 46, 50, 51], "develop": [0, 5, 9, 14, 19, 20, 29, 32, 34, 39, 45], "checklist": [0, 5, 20, 29, 39], "publish": [0, 5, 20, 29, 39], "analys": [0, 5, 20, 22, 29, 32, 39], "cours": [0, 1, 2, 3, 5, 7, 12, 14, 18, 19, 22, 24, 25, 30, 32, 34, 36, 38, 39, 44, 45, 48, 51], "materi": [0, 1, 2, 7, 9, 13, 14, 19, 22, 23, 24, 25, 32, 34, 36, 37, 38, 39, 46, 47, 48, 50, 51], "method": [0, 18, 20, 22, 23, 25, 32, 39, 43], "bioimag": [0, 1, 2, 3, 4, 5, 7, 9, 10, 12, 13, 14, 15, 17, 18, 19, 20, 22, 23, 24, 25, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 48, 50, 52], "om": [0, 1, 4, 14, 17, 18, 20, 24, 32, 36, 46, 47, 50], "ngff": [0, 1, 4, 20, 32, 46, 50], "next": [0, 1, 4, 20, 32, 46, 50], "gener": [0, 1, 4, 9, 20, 22, 32, 38, 39, 43, 46, 48, 50], "file": [0, 1, 4, 20, 32, 46, 50], "format": [0, 1, 4, 5, 9, 20, 26, 32, 43, 46, 50], "expand": [0, 1, 4, 20, 32, 46, 50], "access": [0, 1, 4, 10, 20, 32, 43, 46, 50], "strategi": [0, 1, 4, 20, 32, 46, 50], "zarr": [0, 1, 24, 36], "i2k": [0, 1, 7, 19, 36, 38, 39, 48], "2020": [0, 1, 2, 4, 5, 7, 9, 13, 14, 19, 20, 22, 25, 30, 32, 36, 38, 39, 42, 43, 45, 48], "s3": [0, 1, 36], "workshop": [0, 1, 3, 13, 14, 19, 22, 32, 36, 39, 44, 46, 48, 50], "constantin": 1, "pape": 1, "6": [1, 6, 10, 30, 33, 40, 41, 43], "collect": [1, 14, 20, 34, 38, 39, 43], "teach": [1, 14, 23, 24, 32, 34, 36, 38, 39, 48], "deep": [1, 3, 7, 11, 14, 19, 22, 23, 32, 33, 34, 36, 38, 39, 40, 41, 45, 48], "learn": [1, 3, 7, 9, 11, 14, 19, 22, 23, 24, 32, 33, 34, 36, 38, 39, 40, 41, 44, 45, 48], "biomed": [1, 34, 38, 39], "dl": [1, 19, 22, 36, 38, 39], "mbl": [1, 19, 22, 36, 38, 39], "2021": [1, 4, 7, 19, 20, 22, 32, 36, 38, 39, 46, 48, 50], "exercis": [1, 7, 19, 22, 36, 38, 39, 48], "embl": [1, 2, 7, 13, 19, 24, 36, 38, 48], "22": [1, 7, 19, 36, 38, 48], "train": [1, 5, 9, 12, 14, 17, 18, 19, 20, 22, 23, 24, 25, 32, 33, 34, 36, 37, 38, 39, 41, 45, 46, 47, 48, 50, 52], "model": [1, 2, 9, 14, 19, 22, 32, 36, 38, 39, 48], "vision": [1, 19, 34, 36, 38, 39, 48], "compact": [1, 36, 38, 39], "et": 2, "al": 2, "7": [2, 4, 18, 51], "dl4miceverywher": [2, 14, 19, 32], "python": [2, 3, 6, 9, 11, 12, 13, 14, 17, 19, 20, 24, 30, 31, 32, 34, 36, 39, 44, 45, 47, 48, 52], "code": [2, 13, 19, 20, 36, 39, 48], "club": [2, 13, 19, 36, 48], "mini": [2, 13, 19, 36, 48], "tutori": [2, 7, 13, 14, 19, 24, 25, 27, 29, 30, 34, 36, 38, 39, 42, 48], "applic": [2, 22, 36, 38, 39], "io": [2, 36], "analyst": [2, 5, 9, 13, 19, 20, 22, 24, 32, 36, 39, 45], "school": [2, 5, 9, 13, 18, 19, 20, 22, 32, 36, 39, 45, 48], "2019": [2, 5, 7, 9, 13, 19, 22, 36, 38, 39, 45, 48], "guillaum": 3, "witz": 3, "8": [3, 7, 15], "2022": [3, 7, 19, 36, 38, 39, 48], "mic": [3, 19, 36, 39, 48], "us": [3, 9, 11, 19, 22, 24, 32, 34, 36, 37, 38, 39, 47, 48, 51], "pytorch": [3, 19, 36, 38, 39, 48], "dask": [3, 19, 36, 39, 48], "fundament": [3, 19, 30, 36, 39, 48], "digit": [3, 12, 19, 36, 39], "beginn": [3, 19, 31, 39, 48], "jupyt": [3, 19, 22, 25, 31, 34, 36, 39, 45, 47, 48], "interact": [3, 4, 10, 19, 20, 22, 31, 32, 36, 38, 39, 43, 45, 46, 48, 50], "cloud": [3, 4, 10, 20, 22, 23, 32, 36, 38, 39, 45, 46, 50], "comput": [3, 7, 9, 19, 20, 22, 32, 36, 38, 39, 42, 44, 45, 48], "numpi": [3, 19, 30, 48], "panda": [3, 19, 30, 48], "josh": 4, "moor": 4, "optim": [4, 10, 20, 32, 46, 50], "storag": [4, 10, 20, 32, 46, 50], "larg": [4, 9, 10, 11, 20, 22, 32, 46, 48, 50], "arrai": [4, 10, 20, 32, 46, 50], "edam": [4, 5, 9, 20, 32, 43], "The": [4, 5, 9, 12, 14, 20, 25, 29, 32, 34, 39, 42, 43], "ontolog": [4, 5, 9, 20, 32, 43], "informat": [4, 5, 9, 14, 20, 32, 39, 43], "oper": [4, 5, 9, 20, 32, 43], "topic": [4, 5, 9, 20, 32, 43], "updat": [4, 5, 9, 20, 29, 32, 42, 43], "nfdi4bioimag": [4, 10, 17, 18, 20, 32, 37, 46, 47, 48, 50], "perspect": [4, 10, 20, 32, 46], "nation": [4, 10, 20, 32, 46, 50], "standard": [4, 10, 12, 20, 32, 46], "research": [4, 9, 10, 11, 12, 14, 16, 20, 22, 24, 29, 32, 34, 39, 41, 46, 47, 50, 51], "manag": [4, 9, 10, 11, 12, 14, 16, 19, 20, 22, 24, 29, 32, 36, 38, 39, 41, 43, 46, 47, 48, 50], "survei": [4, 20, 30, 32, 39, 46, 50], "spatialdata": [4, 20, 32, 48], "an": [4, 5, 6, 11, 14, 20, 22, 25, 32, 36, 39, 43, 44, 45, 46, 48, 50], "framework": [4, 20, 32, 48], "spatial": [4, 20, 32, 48], "omic": [4, 20, 32, 48], "n4bi": [4, 23, 32, 50], "ahm": [4, 23, 32, 50], "welcom": [4, 23, 32, 50], "town": [4, 23, 32, 50], "kota": 5, "miura": 5, "basic": [5, 12, 29, 39], "eubia": [5, 12, 24, 36, 39, 45], "2013": [5, 12, 24, 36, 39, 45], "intens": [5, 12, 24, 36, 39, 45], "dynam": [5, 12, 24, 36, 39, 45], "peripheri": [5, 12, 24, 36, 39, 45], "nucleu": [5, 12, 24, 36, 39, 45], "highlight": [5, 9, 20, 32, 39, 45], "from": [5, 9, 20, 22, 23, 32, 39, 45, 51], "2016": [5, 9, 20, 32, 39, 45], "success": [5, 9, 20, 32, 39, 45], "stori": [5, 9, 20, 32, 39, 45], "kei": [5, 9, 20, 32, 39, 45], "asset": [5, 9, 20, 32, 39, 45], "life": [5, 9, 14, 20, 25, 29, 32, 39, 45], "scientist": [5, 9, 20, 29, 32, 39, 45], "what": [5, 22, 27, 36, 39, 45], "introduct": [5, 7, 9, 12, 13, 19, 22, 32, 36, 38, 39, 40, 42, 45, 48], "mara": 6, "lampert": 6, "annot": [6, 10, 11, 14, 15, 20, 23, 29, 39, 43, 44, 47, 48, 50], "3d": [6, 9, 11, 14, 15, 22, 31, 36, 39, 42, 44, 45, 48], "napari": [6, 11, 14, 19, 23, 24, 30, 32, 36, 38, 39, 44, 48], "featur": [6, 11, 39, 44, 48], "extract": [6, 11, 39, 44, 48], "get": [6, 11, 25, 32, 48], "start": [6, 11, 16, 25, 32, 48, 50], "mambaforg": [6, 11, 32, 48], "qualiti": [6, 11, 20, 32, 39, 44, 48], "assur": [6, 11, 39, 44, 48], "segment": [6, 7, 11, 19, 22, 36, 38, 39, 44, 45, 48], "result": [6, 9, 11, 20, 39, 42, 44, 48], "rescal": [6, 11, 39, 44, 48], "pixel": [6, 9, 11, 22, 31, 39, 42, 44, 45, 48], "isotropi": [6, 11, 39, 44, 48], "track": [6, 9, 11, 14, 15, 22, 31, 36, 39, 42, 44, 45, 48], "martin": 7, "weigert": 7, "care": [7, 19, 36, 38, 39, 48], "stardist": [7, 19, 22, 36, 38, 39, 45, 48], "embo": [7, 18, 19, 36, 38, 39, 48], "optic": [7, 19, 36, 38, 39, 48], "biologi": [7, 9, 11, 12, 19, 20, 29, 32, 36, 38, 39, 43, 44, 48, 50, 51], "csbdeep": [7, 19, 36, 38, 39, 48], "2023": [7, 17, 18, 19, 20, 32, 36, 38, 46, 47, 48, 50], "machin": [7, 9, 19, 22, 23, 24, 32, 33, 36, 38, 39, 40, 44, 45, 48], "archiv": [7, 14, 15, 20, 23, 33, 39, 40, 48, 50], "academi": [7, 19, 22, 31, 36, 38, 39, 45, 48], "nuclei": [7, 19, 22, 36, 38, 39, 45, 48], "robert": 9, "haas": 9, "36": 9, "studi": [9, 13, 20, 36, 39, 42, 45], "long": [9, 20, 42], "term": [9, 20, 42], "reproduc": [9, 12, 20, 22, 32, 34, 42, 52], "imagej": [9, 13, 14, 17, 20, 22, 24, 25, 34, 36, 39, 42, 45, 52], "help": [9, 22, 32, 48], "languag": [9, 22, 32, 48], "scienc": [9, 12, 14, 19, 20, 23, 29, 32, 33, 39, 40, 41, 48, 50], "biostatist": [9, 19, 32, 39, 44, 48], "program": [9, 14, 19, 22, 32, 36, 39, 42, 44, 48], "brows": [9, 11, 32, 47, 48], "resourc": [9, 11, 12, 14, 15, 17, 20, 32, 36, 37, 38, 39, 45, 47, 48, 50, 52], "clij": [9, 20, 29, 39, 42], "gpu": [9, 18, 19, 20, 22, 29, 32, 39, 42, 48], "acceler": [9, 18, 19, 20, 22, 29, 32, 39, 42, 48], "everyon": [9, 20, 29, 39, 42], "challeng": [9, 14, 15, 20, 22, 32, 36, 39, 45, 46, 50], "opportun": [9, 20, 22, 32, 39, 45, 46, 50], "core": [9, 10, 14, 20, 22, 32, 39, 46, 48, 50], "facil": [9, 10, 11, 14, 16, 20, 22, 25, 32, 36, 39, 42, 46, 47, 50], "collabor": [9, 11, 20, 32, 39, 50, 51], "script": [9, 11, 19, 32, 38, 39, 42, 48, 50, 51], "edit": [9, 11, 12, 32, 50, 51], "git": [9, 11, 23, 24, 32, 33, 36, 41, 50, 51], "cultiv": [9, 23, 32, 33, 41, 50], "advanc": [9, 14, 18, 23, 25, 33, 39, 41, 50], "datenmanag": [9, 23, 33, 50], "artifici": [9, 22, 32, 38, 39, 48], "intellig": [9, 22, 32, 38, 39, 48], "If": [9, 11, 32, 50], "you": [9, 11, 32, 50], "licens": [9, 11, 22, 23, 32, 33, 37, 41, 50, 51], "ll": [9, 11, 32, 50], "harder": [9, 11, 32, 50], "steal": [9, 11, 32, 50], "why": [9, 11, 32, 50, 51], "we": [9, 11, 32, 50], "should": [9, 11, 32, 50], "our": [9, 11, 32, 50], "work": [9, 11, 22, 31, 32, 39, 42, 45, 50], "imagej2": [9, 22, 31, 39, 42, 45], "api": [9, 22, 31, 39, 42, 45], "beat": [9, 22, 31, 39, 42, 45], "macro": [9, 13, 22, 36, 39, 42, 45], "scientif": [9, 11, 12, 22, 32, 36, 39, 42, 48, 52], "mpi": [9, 22, 36, 39, 42], "cbg": [9, 22, 36, 39, 42], "dresden": [9, 22, 32, 36, 39, 42, 46, 50], "kollabor": [9, 23, 33, 41, 50], "arbeiten": [9, 23, 33, 41, 50], "und": [9, 23, 33, 41, 50], "versionskontrol": [9, 23, 33, 41, 50], "mit": [9, 23, 33, 34, 41, 50], "lectur": [9, 14, 19, 22, 25, 32, 39, 42, 44, 48], "appli": [9, 22, 39, 42], "environ": [9, 11, 14, 25, 32, 47, 48], "conda": [9, 11, 17, 32, 48], "mamba": [9, 11, 32, 48], "friend": [9, 11, 19, 30, 32, 39, 48], "meet": [9, 20, 32, 39], "middl": [9, 20, 32, 39], "toward": [9, 20, 22, 32, 36, 39], "multidisciplinari": [9, 20, 32, 39], "multi": [9, 22, 25, 31, 32, 39, 42, 45, 46, 47, 50], "view": [9, 22, 31, 39, 42, 45], "fusion": [9, 22, 31, 39, 42, 45], "share": [9, 11, 22, 23, 32, 33, 41, 50, 51], "quo": [9, 20, 29], "vadi": [9, 20, 29], "parallel": [9, 22, 32], "heterogen": [9, 22, 32], "pure": [9, 22, 32], "cpu": [9, 22, 32], "zenodo": [9, 11, 32, 50, 51], "theori": [9, 22, 31, 39, 42, 45], "trackmat": [9, 22, 31, 39, 42, 45], "mastodon": [9, 22, 31, 39, 42, 45], "object": [9, 17, 20, 22, 31, 39, 42, 45, 52], "2d": [9, 14, 15, 22, 31, 36, 39, 42, 45], "susann": 10, "kuni": 10, "mdemic": [10, 20, 29, 43, 50], "metadata": [10, 14, 20, 23, 25, 29, 32, 43, 46, 47, 50], "tool": [10, 14, 19, 20, 29, 32, 36, 38, 39, 43, 47, 50], "facilit": [10, 20, 29, 43, 50], "fair": [10, 14, 20, 22, 23, 24, 25, 29, 36, 39, 41, 43, 47, 50], "set": [10, 13, 14, 15, 20, 24, 25, 36, 39, 46, 50], "up": [10, 17, 20, 24, 36, 38, 46, 50, 52], "infrastructur": [10, 20, 46, 50], "structur": [10, 23, 25, 32, 46, 47, 50], "concept": [10, 12, 25, 32, 46, 50], "technic": [10, 25, 32, 46, 50], "solut": [10, 25, 32, 46, 50], "context": [10, 25, 32, 46, 50], "link": [10, 14, 25, 28, 32, 36, 46, 50], "blog": 11, "15": [11, 12], "handl": [11, 23, 47, 50], "scale": [11, 22, 32, 46, 50], "electron": [11, 50], "promot": [11, 50], "nikon": [11, 50], "center": [11, 14, 25, 39, 50], "cell": [11, 12, 14, 15, 36, 39, 50, 51], "run": [11, 32, 38, 39, 48], "bia": [11, 32, 38, 39, 48], "pol": [11, 18, 19, 32, 38, 39, 48], "omero": [11, 14, 16, 17, 20, 22, 23, 25, 29, 32, 34, 36, 38, 39, 46, 47, 48, 50], "server": [11, 32, 38, 39, 48], "your": [11, 17, 24, 32, 39, 48, 50, 51], "poster": [11, 50, 51], "figshar": [11, 50, 51], "how": [11, 14, 25, 27, 37, 50, 51], "To": [11, 50, 51], "book": 12, "notebook": [12, 19, 31, 34, 39, 47, 48], "deepprofil": [12, 36, 38, 39], "handbook": [12, 19, 32, 36, 38, 39, 44, 45, 48, 50], "base": [12, 19, 20, 38, 39, 43, 48], "profil": [12, 39], "intern": [12, 32], "align": [12, 32], "extend": [12, 32], "visual": [12, 14, 15, 17, 19, 20, 30, 39, 42, 48, 52], "matplotlib": [12, 48], "super": 12, "resolut": 12, "primer": 12, "ture": [12, 34], "wai": [12, 34], "trainer": [12, 32, 50], "10": 13, "carpentri": [13, 24, 34], "biologist": [13, 14, 19, 20, 24, 31, 34, 38, 48], "2018": [13, 19, 22, 36, 39, 45], "nextflow": [13, 14, 17, 22, 32, 36, 48, 52], "demo": [13, 36], "pipelin": [13, 17, 34, 36, 39, 47, 48, 52], "scripts_filopodyanr": [13, 36, 39, 45], "case": [13, 36, 39, 45], "ts7": [13, 36, 39, 45], "szege": [13, 36, 39, 45], "quantix": [13, 39], "thedigitalcel": [13, 39], "first": [13, 39], "complet": [13, 39], "52": 14, "plan": [14, 20, 24, 31, 39, 41, 50], "perform": [14, 20, 31], "quantit": [14, 20, 31], "experi": [14, 20, 30, 31, 39], "valid": [14, 15, 20, 39], "databas": [14, 18, 32, 39, 47, 50], "ai": [14, 15, 39, 40], "galleri": [14, 15, 39, 40], "volum": [14, 15, 39], "em": [14, 15, 39], "index": [14, 39], "zoo": [14, 36, 38, 39], "coba": [14, 25, 39], "youtub": [14, 25, 36, 39, 44, 45, 47, 48], "channel": [14, 25, 36, 39, 44, 45, 47, 48], "czi": 14, "dataset": [14, 15, 36, 39], "celltrackcolab": [14, 19, 34], "chri": [14, 25, 36, 39, 44, 48], "halvin": [14, 25, 36, 39, 44, 48], "digitalsreeni": [14, 25, 48], "euro": [14, 22, 23, 24, 25, 36, 39, 41, 50], "templat": [14, 24, 39, 41, 50], "Is": [14, 25, 39], "just": [14, 25, 39], "forschungsdaten": [14, 32, 50], "info": [14, 50], "org": [14, 32, 50], "gerbi": [14, 36], "list": [14, 36, 50], "global": [14, 18, 25, 39], "i3d": [14, 22, 25, 32, 36, 46, 47, 50], "onlin": [14, 36, 50], "ibiolog": [14, 25, 39], "cycl": [14, 25, 39], "imari": [14, 25, 29, 39], "melbourn": [14, 25, 39], "microscopydb": [14, 29], "event": [14, 18, 47, 50], "deploy": [14, 47], "exampl": [14, 16, 47], "microscopist": [14, 19, 36, 39, 48], "rdm4mic": [14, 25, 32, 36, 47, 50], "present": [14, 32, 50], "rdmbite": [14, 25], "rdmkit": [14, 32, 50], "tess": [14, 18, 36], "zen": [14, 19, 39, 44, 48], "zerocostdl4m": [14, 19, 34], "exploit": [14, 19, 34], "googl": [14, 19, 34], "colab": [14, 19, 25, 34], "toolbox": [14, 17, 19, 20, 34, 42, 52], "arivi": [14, 25, 29, 39], "vision4d": [14, 25, 29, 39], "microlist": [14, 29], "document": [16, 17, 32, 36, 39, 40, 47, 48, 52], "5": [16, 28], "effici": [16, 32, 50], "institut": [16, 32, 50], "lund": [16, 50], "declar": [16, 50], "maximis": [16, 50], "benefit": [16, 50], "morpholibj": [16, 39], "walkthrough": [16, 47], "14": [17, 29], "ai4lif": [17, 36, 38, 52], "team": [17, 36, 38, 52], "galaxi": [17, 22, 23, 24, 34, 36, 38, 39, 52], "network": [17, 19, 36, 38, 48, 52], "gtn": [17, 36, 38, 52], "enhanc": [17, 36, 38, 52], "biapi": [17, 48, 52], "bioengin": [17, 20, 36, 38, 40, 48, 52], "fractal": [17, 48, 52], "jipip": [17, 20, 42, 52], "batch": [17, 20, 42, 52], "make": [17, 24, 32, 48, 50, 51], "packag": [17, 32, 48], "avail": [17, 32, 48], "forg": [17, 32, 48], "mitobo": [17, 20, 42, 52], "modularimageanalysi": [17, 20, 42, 52], "mia": [17, 20, 42, 52], "assembl": [17, 20, 42, 52], "modularisedimag": [17, 20, 42, 52], "workflow": [17, 20, 22, 24, 32, 36, 38, 39, 42, 45, 47, 52], "ta3": [17, 18, 20, 32, 46, 47, 48, 50], "hackathon": [17, 18, 20, 32, 46, 47, 48, 50], "uoc": [17, 18, 20, 32, 46, 47, 48, 50], "cologn": [17, 18, 20, 32, 46, 47, 48, 50], "snakemak": [17, 48, 52], "earli": [18, 19, 39, 48], "career": [18, 19, 39, 48], "47": 19, "project": [19, 24, 36, 38, 39, 50, 51], "For": [19, 38, 48], "graphic": [19, 34, 38, 48], "scikit": [19, 30, 39, 48], "iafig": [19, 39], "rm": [19, 39], "metabol": [19, 36, 48], "cobrapi": [19, 36, 48], "home": [19, 31, 39, 45, 48], "onbi": [19, 39, 48], "qi": [19, 32, 48], "2024": [19, 32, 44, 48], "lab": [19, 24, 32, 36, 38, 48], "manual": [19, 32, 48], "qm": [19, 32, 44, 48], "public": [20, 50], "40": 20, "need": [20, 30, 39], "futur": [20, 30, 39], "call": [20, 50], "biolog": [20, 29, 43, 50], "bridg": [20, 30, 39], "user": [20, 22, 25, 30, 32, 39, 46, 47, 50], "build": [20, 22, 36, 38, 39, 50], "ecosystem": [20, 50], "matter": [20, 43], "real": [20, 43], "world": [20, 43], "methodsj2": [20, 43], "captur": [20, 43], "comprehens": [20, 43], "text": [20, 43], "micro": [20, 43], "meta": [20, 43], "app": [20, 43], "specif": [20, 43], "initi": [20, 32, 46, 50], "plant": 20, "seri": 20, "lesson": 20, "bioinformat": 20, "quarep": [20, 32], "limi": [20, 32], "driven": [20, 32], "establish": [20, 32], "guidelin": [20, 32], "assess": [20, 32], "instrument": [20, 32], "light": [20, 32], "rembi": [20, 29, 43, 50], "recommend": [20, 29, 43, 50], "enabl": [20, 29, 43, 50], "reus": [20, 29, 43, 50], "understand": [20, 39], "metric": [20, 39], "relat": [20, 39], "pitfal": [20, 39], "slide": [22, 23, 25, 32, 44, 46, 47, 50], "39": 22, "ad": [22, 39, 45], "biaflow": [22, 39, 45], "strudel": [22, 32, 46, 50], "tu": [22, 32, 46, 50], "creat": [22, 32], "curricula": [22, 32], "re": [22, 25, 32, 46, 47, 50, 51], "usabl": [22, 25, 32, 46, 47, 50], "adjust": [22, 25, 32, 46, 47, 50], "purpos": [22, 25, 32, 46, 47, 50], "local": [22, 25, 32, 46, 47, 50], "servic": [22, 36], "effort": [22, 36], "scalabl": [22, 32, 52], "qupath": [22, 32, 39], "awkward": [22, 32, 39], "seminar": [22, 32, 50], "think": [22, 32, 46, 50], "differ": [22, 32, 46, 50], "zida": [22, 36, 38, 39], "ilastik": [22, 32, 38, 39], "13": [23, 34, 46], "task": [23, 24, 39, 41, 50], "fairi": [23, 33, 40, 41], "intro": [23, 44], "my": [23, 32], "journei": [23, 32], "classroom": [23, 32], "16": [24, 42, 47], "kreshuk": [24, 36, 38], "eipp": [24, 36, 38], "predoc": [24, 36, 38], "flow": [24, 36, 39], "cytometri": [24, 36, 39], "ifc": [24, 36, 39], "citabl": [24, 50, 51], "remot": [24, 36], "desktop": [24, 36], "browser": [24, 36], "citat": [24, 50, 51], "cff": [24, 50, 51], "control": [24, 36], "github": [24, 36], "video": 25, "20": 25, "yml": 26, "contribut": [27, 37], "quick": 27, "short": 27, "cut": 27, "inclus": 27, "criteria": 27, "exclus": 27, "mainten": 27, "step": 27, "imprint": 28, "impressum": 28, "angaben": 28, "gem\u00e4\u00df": 28, "tmg": 28, "kontakt": 28, "verantwortlich": 28, "f\u00fcr": 28, "den": 28, "inhalt": 28, "nach": 28, "55": 28, "ab": 28, "2": 28, "rstv": 28, "haftungsausschluss": 28, "haftung": 28, "urheberrecht": 28, "datenschutz": 28, "all": 29, "right": 29, "reserv": 29, "epflx": [29, 39], "bsd": [30, 31], "3": [30, 31], "claus": [30, 31], "9": 31, "cc": [32, 33], "4": [32, 33], "0": [32, 33], "58": 32, "hc": [34, 39, 47, 48], "unknown": 36, "59": 36, "diffus": [36, 39], "restor": [36, 39], "thi": 37, "acknowledg": 37, "26": [38, 45], "111": 39, "bring": [39, 50], "own": [39, 50], "principl": 41, "12": [44, 52], "friendli": 47, "61": 48, "50": 50, "studentsourc": 51, "aggreg": 51, "engin": 52}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 6, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.intersphinx": 1, "sphinx": 56}})
\ No newline at end of file
+Search.setIndex({"docnames": ["authors/christian_tischer", "authors/constantin_pape", "authors/et_al.", "authors/guillaume_witz", "authors/josh_moore", "authors/kota_miura", "authors/mara_lampert", "authors/martin_weigert", "authors/readme", "authors/robert_haase", "authors/susanne_kunis", "content_types/blog", "content_types/book", "content_types/code", "content_types/collection", "content_types/data", "content_types/document", "content_types/documentation", "content_types/event", "content_types/notebook", "content_types/publication", "content_types/readme", "content_types/slide", "content_types/slides", "content_types/tutorial", "content_types/video", "contributing/format", "contributing/index", "imprint", "licenses/all_rights_reserved", "licenses/bsd-3-clause", "licenses/bsd_3-clause", "licenses/cc-by-4.0", "licenses/cc-by_4.0", "licenses/mit", "licenses/readme", "licenses/unknown", "readme", "tags/artificial_intelligence", "tags/bioimage_analysis", "tags/deep_learning", "tags/fair-principles", "tags/imagej", "tags/meta_data", "tags/napari", "tags/neubias", "tags/nfdi4bioimage", "tags/omero", "tags/python", "tags/readme", "tags/research_data_management", "tags/sharing", "tags/workflow_engine"], "filenames": ["authors/christian_tischer.md", "authors/constantin_pape.md", "authors/et_al..md", "authors/guillaume_witz.md", "authors/josh_moore.md", "authors/kota_miura.md", "authors/mara_lampert.md", "authors/martin_weigert.md", "authors/readme.md", "authors/robert_haase.md", "authors/susanne_kunis.md", "content_types/blog.md", "content_types/book.md", "content_types/code.md", "content_types/collection.md", "content_types/data.md", "content_types/document.md", "content_types/documentation.md", "content_types/event.md", "content_types/notebook.md", "content_types/publication.md", "content_types/readme.md", "content_types/slide.md", "content_types/slides.md", "content_types/tutorial.md", "content_types/video.md", "contributing/format.md", "contributing/index.md", "imprint.md", "licenses/all_rights_reserved.md", "licenses/bsd-3-clause.md", "licenses/bsd_3-clause.md", "licenses/cc-by-4.0.md", "licenses/cc-by_4.0.md", "licenses/mit.md", "licenses/readme.md", "licenses/unknown.md", "readme.md", "tags/artificial_intelligence.md", "tags/bioimage_analysis.md", "tags/deep_learning.md", "tags/fair-principles.md", "tags/imagej.md", "tags/meta_data.md", "tags/napari.md", "tags/neubias.md", "tags/nfdi4bioimage.md", "tags/omero.md", "tags/python.md", "tags/readme.md", "tags/research_data_management.md", "tags/sharing.md", "tags/workflow_engine.md"], "titles": ["Christian tischer (11)", "Constantin pape (6)", "Et al. (7)", "Guillaume witz (8)", "Josh moore (7)", "Kota miura (11)", "Mara lampert (6)", "Martin weigert (8)", "&lt;no title&gt;", "Robert haase (36)", "Susanne kunis (6)", "Blog (15)", "Book (15)", "Code (10)", "Collection (52)", "Data (8)", "Document (5)", "Documentation (14)", "Event (7)", "Notebook (47)", "Publication (40)", "&lt;no title&gt;", "Slide (39)", "Slides (13)", "Tutorial (16)", "Video (20)", "YML format", "How to contribute", "Imprint", "All rights reserved (14)", "Bsd-3-clause (6)", "Bsd 3-clause (9)", "Cc-by-4.0 (58)", "Cc-by 4.0 (6)", "Mit (13)", "&lt;no title&gt;", "Unknown (59)", "NFDI4BioImage Training Materials", "Artificial intelligence (26)", "Bioimage analysis (111)", "Deep learning (6)", "Fair-principles (6)", "Imagej (16)", "Meta data (6)", "Napari (12)", "Neubias (26)", "Nfdi4bioimage (13)", "Omero (16)", "Python (61)", "&lt;no title&gt;", "Research data management (50)", "Sharing (7)", "Workflow engine (12)"], "terms": {"robert": [0, 2, 4, 5, 11, 12, 13, 19, 20, 22, 23, 28, 29, 31, 32, 33, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51], "haas": [0, 2, 4, 5, 11, 12, 13, 19, 20, 22, 23, 28, 29, 31, 32, 33, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51], "elnaz": [0, 9, 20, 23, 32, 39], "faze": [0, 9, 20, 23, 32, 39], "david": [0, 1, 2, 4, 5, 9, 13, 19, 20, 22, 29, 30, 32, 36, 38, 39, 43, 45, 46, 50], "legland": [0, 9, 20, 32, 39], "michael": [0, 5, 9, 10, 12, 20, 29, 32, 36, 38, 39, 46, 50], "doub": [0, 9, 20, 32, 39], "si\u00e2n": [0, 2, 5, 7, 9, 13, 19, 20, 22, 32, 36, 38, 39, 45, 48], "cullei": [0, 2, 5, 7, 9, 13, 19, 20, 22, 32, 36, 38, 39, 45, 48], "ilya": [0, 9, 20, 32, 39], "belevich": [0, 9, 20, 32, 39], "eija": [0, 9, 20, 32, 39], "jokitalo": [0, 9, 20, 32, 39], "martin": [0, 1, 4, 5, 9, 14, 19, 20, 22, 23, 29, 30, 32, 33, 34, 36, 38, 39, 40, 43, 45, 48], "schorb": [0, 9, 20, 32, 39], "anna": [0, 5, 7, 9, 13, 19, 20, 22, 23, 32, 33, 36, 38, 39, 40, 44, 45, 48], "klemm": [0, 5, 9, 13, 20, 22, 32, 36, 39, 45], "licens": [0, 1, 2, 3, 4, 5, 6, 7, 10, 12, 13, 14, 15, 16, 17, 18, 19, 20, 24, 25, 26, 29, 30, 31, 34, 36, 38, 39, 40, 42, 43, 44, 45, 46, 47, 48, 52], "cc": [0, 1, 2, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 22, 23, 24, 25, 28, 31, 34, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "4": [0, 1, 2, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 22, 23, 24, 25, 28, 31, 34, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "0": [0, 1, 2, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 22, 23, 24, 25, 28, 31, 34, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "thi": [0, 9, 19, 20, 22, 23, 26, 27, 29, 32, 33, 34, 39, 40, 41, 45, 47, 48, 50], "articl": [0, 1, 4, 5, 9, 10, 14, 15, 17, 19, 20, 29, 32, 34, 39, 42, 43, 45, 46, 48, 50, 52], "give": [0, 9, 20, 22, 32, 39], "an": [0, 9, 17, 19, 23, 28, 33, 34, 40, 41, 42, 47, 52], "overview": [0, 9, 20, 23, 32, 33, 39, 41, 50], "about": [0, 9, 11, 14, 18, 19, 20, 25, 29, 30, 32, 34, 39, 42, 47, 50, 51], "commonli": [0, 9, 14, 20, 25, 32, 39, 45], "us": [0, 7, 12, 14, 17, 20, 23, 25, 26, 27, 29, 33, 40, 42, 44, 45, 46, 50, 52], "which": [0, 7, 9, 12, 20, 22, 23, 26, 27, 32, 33, 34, 37, 39, 40, 48], "aspect": [0, 9, 16, 20, 32, 39, 50], "consid": [0, 9, 20, 27, 32, 37, 39], "when": [0, 9, 11, 20, 32, 39, 45, 50], "choos": [0, 9, 11, 20, 22, 32, 39, 50], "specif": [0, 9, 27, 32, 34, 39, 47, 48], "project": [0, 9, 14, 20, 22, 25, 32, 37, 41, 46, 47], "tag": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "content": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "type": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "public": [0, 1, 4, 5, 9, 10, 14, 15, 17, 18, 27, 29, 30, 31, 32, 36, 38, 39, 42, 43, 45, 46, 47, 48, 52], "http": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "feb": [0, 9, 20, 32, 39], "onlinelibrari": [0, 9, 10, 20, 32, 39, 50], "wilei": [0, 5, 9, 10, 12, 20, 29, 32, 39, 42, 45, 46, 47, 50], "com": [0, 1, 3, 4, 5, 6, 9, 10, 11, 12, 14, 15, 17, 19, 20, 22, 23, 25, 29, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "doi": [0, 4, 9, 10, 12, 13, 14, 17, 19, 20, 22, 24, 25, 26, 29, 30, 31, 32, 34, 38, 39, 42, 43, 46, 47, 50, 51, 52], "full": [0, 5, 9, 12, 20, 29, 32, 39, 45, 50], "10": [0, 4, 5, 9, 10, 12, 14, 17, 19, 20, 22, 25, 28, 29, 30, 31, 32, 34, 38, 39, 42, 43, 45, 46, 47, 48, 50, 51, 52], "1002": [0, 5, 9, 12, 20, 29, 32, 39, 42, 45, 46, 47, 50], "1873": [0, 9, 20, 32, 39], "3468": [0, 9, 20, 32, 39], "14451": [0, 9, 20, 32, 39], "kota": [0, 2, 4, 9, 12, 13, 19, 20, 22, 24, 29, 32, 36, 39, 43, 45], "miura": [0, 2, 4, 9, 12, 13, 19, 20, 22, 24, 29, 32, 36, 39, 43, 45], "christoph": [0, 5, 14, 17, 18, 19, 20, 29, 32, 34, 36, 39, 46, 47, 48, 50], "schiklenk": [0, 5, 36], "clemen": [0, 5, 36], "lakner": [0, 5, 36], "aliaksandr": [0, 5, 36], "halavatyi": [0, 5, 36], "2014": [0, 5, 22, 32, 36, 52], "unknown": [0, 1, 2, 3, 5, 7, 9, 12, 13, 14, 15, 17, 19, 20, 22, 24, 25, 38, 39, 42, 44, 45, 47, 48, 50, 52], "htmanalysiscours": [0, 5, 36], "ashi": [0, 20, 32, 39, 50], "ravindran": [0, 20, 32, 39, 50], "sabin": [0, 20, 32, 39, 50], "reither": [0, 20, 32, 39, 50], "nicola": [0, 12, 20, 32, 39, 48, 50], "chiaruttini": [0, 20, 32, 39, 50], "rainer": [0, 20, 32, 39, 50], "pepperkok": [0, 20, 32, 39, 50], "nil": [0, 20, 32, 39, 50], "norlin": [0, 20, 32, 39, 50], "research": [0, 1, 17, 18, 19, 23, 25, 27, 33, 36, 37, 43, 44, 45, 48, 52], "manag": [0, 1, 17, 18, 23, 25, 27, 33, 34, 37, 40, 44, 45, 51, 52], "org": [0, 2, 4, 9, 10, 11, 12, 13, 15, 16, 17, 18, 19, 20, 22, 23, 24, 25, 29, 30, 31, 33, 34, 36, 38, 39, 41, 42, 43, 46, 47, 48, 51, 52], "1093": [0, 20, 32, 39, 50], "bioinformat": [0, 14, 17, 18, 32, 36, 39, 48, 50, 52], "btab106": [0, 20, 32, 39, 50], "slide": [0, 1, 2, 3, 4, 5, 7, 9, 13, 16, 19, 24, 27, 31, 33, 34, 36, 38, 39, 40, 41, 42, 45, 48, 51, 52], "tischi": [0, 1, 22, 24, 34, 36, 39, 45], "present": [0, 3, 22, 36, 38, 39, 45, 46], "carolina": [0, 24, 36, 39, 45], "w\u00e4hlby": [0, 24, 36, 39, 45], "maxim": [0, 24, 36, 39, 45], "bombrun": [0, 24, 36, 39, 45], "tutori": [0, 5, 12, 22, 23, 32, 41, 45, 46, 47, 50, 51], "schmi": [0, 5, 20, 29, 39], "nelson": [0, 5, 19, 20, 29, 30, 32, 39], "sergii": [0, 5, 20, 29, 39], "avilov": [0, 5, 20, 29, 39], "gert": [0, 5, 20, 29, 39], "jan": [0, 1, 5, 9, 19, 20, 22, 29, 32, 36, 38, 39, 50], "bakker": [0, 5, 20, 29, 39], "cristina": [0, 5, 20, 29, 39], "bertocchi": [0, 5, 20, 29, 39], "johanna": [0, 5, 14, 19, 20, 29, 34, 39, 50], "bischof": [0, 5, 20, 29, 39, 50], "ulrik": [0, 5, 12, 20, 29, 32, 39, 50], "boehm": [0, 5, 20, 29, 32, 39], "brocher": [0, 5, 20, 29, 39], "mariana": [0, 5, 20, 29, 39], "t": [0, 5, 12, 20, 27, 29, 30, 39, 47], "carvalho": [0, 5, 20, 29, 39], "catalin": [0, 5, 20, 29, 39], "chiritescu": [0, 5, 20, 29, 39], "jana": [0, 5, 20, 29, 39], "beth": [0, 5, 7, 12, 14, 19, 20, 23, 29, 30, 31, 32, 33, 39, 40, 48], "cimini": [0, 5, 7, 12, 14, 19, 20, 23, 29, 30, 31, 32, 33, 39, 40, 48], "eduardo": [0, 5, 20, 29, 39], "cond": [0, 5, 20, 29, 39], "sousa": [0, 5, 20, 29, 39], "ebner": [0, 5, 20, 29, 39], "rupert": [0, 5, 20, 29, 39], "ecker": [0, 5, 20, 29, 39], "kevin": [0, 1, 4, 5, 9, 12, 14, 17, 19, 20, 29, 30, 31, 32, 39, 44, 45, 46, 48, 50], "eliceiri": [0, 5, 9, 14, 20, 29, 30, 31, 32, 39, 45], "julia": [0, 5, 10, 17, 18, 20, 22, 25, 29, 32, 39, 46, 47, 48, 50], "fernandez": [0, 5, 20, 29, 39], "rodriguez": [0, 5, 20, 29, 39], "nathali": [0, 5, 20, 29, 39], "gaudreault": [0, 5, 20, 29, 39], "laurent": [0, 5, 20, 29, 39], "gelman": [0, 5, 20, 29, 39], "grunwald": [0, 5, 20, 29, 39], "tingt": [0, 5, 20, 29, 39], "gu": [0, 5, 20, 29, 39], "nadia": [0, 5, 20, 29, 39], "halidi": [0, 5, 20, 29, 39], "mathia": [0, 5, 20, 29, 39], "hammer": [0, 5, 20, 29, 39], "matthew": [0, 5, 20, 29, 39], "hartlei": [0, 5, 20, 29, 39], "mari": [0, 1, 4, 5, 9, 20, 29, 32, 39, 43, 46, 50], "held": [0, 5, 20, 29, 34, 39, 47, 48], "florian": [0, 2, 4, 5, 9, 14, 19, 20, 22, 24, 29, 32, 34, 36, 39, 42, 43, 45, 48], "jug": [0, 5, 9, 14, 19, 20, 29, 32, 34, 39, 42, 48], "varun": [0, 5, 20, 29, 39], "kapoor": [0, 5, 20, 29, 39], "ays": [0, 5, 20, 29, 39], "aslihan": [0, 5, 20, 29, 39], "koksoi": [0, 5, 20, 29, 39], "judith": [0, 5, 20, 29, 39], "lacost": [0, 5, 20, 29, 39], "sylvia": [0, 5, 20, 29, 39], "le": [0, 5, 20, 29, 39], "d\u00e9v\u00e9dec": [0, 5, 20, 29, 39], "sylvi": [0, 5, 20, 29, 39], "guyad": [0, 5, 20, 29, 39], "penghuan": [0, 5, 20, 29, 39], "liu": [0, 5, 20, 29, 39], "gabriel": [0, 5, 9, 20, 29, 32, 39, 45], "g": [0, 5, 9, 20, 27, 29, 32, 37, 39, 45], "aastha": [0, 5, 20, 22, 29, 36, 39, 50], "mathur": [0, 5, 20, 22, 29, 36, 39, 50], "paula": [0, 4, 5, 9, 14, 20, 29, 31, 32, 39, 43], "montero": [0, 5, 14, 20, 29, 31, 39, 43], "llopi": [0, 5, 14, 20, 29, 31, 39, 43], "roland": [0, 5, 10, 20, 29, 39, 50], "nitschk": [0, 5, 10, 20, 29, 39, 50], "alison": [0, 5, 20, 29, 39], "north": [0, 5, 20, 29, 39], "adam": [0, 5, 9, 20, 29, 32, 39], "c": [0, 5, 9, 14, 20, 25, 29, 32, 39], "parslow": [0, 5, 20, 29, 39], "alex": [0, 5, 20, 29, 39, 43], "payn": [0, 5, 20, 29, 39], "dwyer": [0, 5, 20, 29, 39], "laur": [0, 4, 5, 9, 20, 29, 32, 39, 43], "plantard": [0, 4, 5, 9, 20, 29, 32, 39, 43], "rizwan": [0, 5, 20, 29, 39], "ali": [0, 5, 20, 29, 39], "britta": [0, 5, 20, 29, 39], "schroth": [0, 5, 20, 29, 39], "diez": [0, 5, 20, 29, 39], "luca": [0, 4, 5, 14, 19, 20, 29, 32, 34, 39, 48], "sch\u00fctz": [0, 5, 20, 29, 39], "ryan": [0, 5, 7, 9, 20, 23, 29, 32, 33, 39, 40, 43, 48], "scott": [0, 5, 20, 29, 39], "arn": [0, 5, 20, 29, 39], "seitz": [0, 5, 20, 29, 39], "olaf": [0, 5, 20, 29, 39], "selchow": [0, 5, 20, 29, 39], "ved": [0, 5, 20, 29, 39], "p": [0, 5, 9, 12, 20, 22, 29, 32, 36, 39, 45, 48], "sharma": [0, 5, 20, 29, 39], "spital": [0, 5, 20, 29, 39], "sathya": [0, 5, 20, 29, 39], "srinivasan": [0, 5, 20, 29, 39], "caterina": [0, 5, 10, 17, 20, 29, 36, 38, 39, 43, 50, 52], "strambio": [0, 5, 10, 20, 29, 39, 43, 50], "de": [0, 2, 4, 5, 7, 9, 10, 13, 14, 17, 19, 20, 22, 23, 24, 26, 28, 29, 31, 32, 33, 36, 38, 39, 40, 41, 42, 43, 45, 46, 48, 50, 52], "castillia": [0, 5, 10, 20, 29, 39, 43, 50], "dougla": [0, 5, 20, 29, 39], "taatj": [0, 5, 20, 29, 39], "helena": [0, 5, 14, 20, 29, 31, 39], "klara": [0, 5, 20, 29, 39], "jambor": [0, 5, 14, 20, 29, 31, 39], "all": [0, 4, 5, 9, 10, 12, 14, 20, 23, 25, 27, 32, 37, 39, 42, 43, 45, 46, 47, 50], "right": [0, 5, 9, 10, 12, 14, 20, 22, 25, 27, 32, 39, 42, 43, 45, 46, 47, 48, 50], "reserv": [0, 5, 9, 10, 12, 14, 20, 25, 27, 39, 42, 43, 45, 46, 47, 50], "www": [0, 1, 4, 5, 7, 9, 10, 12, 14, 15, 16, 17, 18, 19, 20, 22, 23, 25, 29, 30, 31, 32, 33, 34, 36, 39, 40, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "natur": [0, 1, 4, 5, 10, 14, 15, 17, 19, 20, 29, 32, 34, 39, 42, 43, 46, 50, 52], "s41592": [0, 1, 4, 5, 9, 10, 17, 20, 29, 32, 39, 42, 43, 46, 50, 52], "023": [0, 5, 20, 29, 39, 50], "01987": [0, 5, 20, 29, 39], "9": [0, 4, 5, 9, 20, 29, 32, 39, 43], "mit": [0, 1, 3, 12, 13, 14, 17, 19, 24, 28, 38, 39, 40, 44, 47, 48, 52], "train": [0, 7, 26, 27, 40], "registr": [0, 34], "big": [0, 1, 3, 19, 34, 36, 39, 48], "warp": [0, 34], "elastix": [0, 34], "onlin": [0, 9, 22, 23, 24, 25, 29, 32, 37, 39, 41, 51], "video": [0, 7, 10, 14, 22, 23, 26, 29, 32, 33, 36, 39, 40, 44, 45, 46, 47, 48, 50], "ebi": [0, 7, 14, 15, 22, 23, 25, 32, 33, 39, 40, 48], "ac": [0, 7, 14, 15, 19, 22, 23, 25, 32, 33, 39, 40, 42, 48], "uk": [0, 7, 14, 15, 19, 22, 23, 25, 32, 33, 39, 40, 42, 48], "event": [0, 17, 19, 20, 22, 25, 27, 32, 39, 46, 48], "6019": [0, 22, 25, 32, 39], "tol": [0, 22, 25, 32, 39], "bioimageanalysis22": [0, 22, 25, 32, 39], "w": [0, 1, 4, 9, 14, 20, 22, 25, 30, 31, 32, 39, 42, 45, 46, 50], "2022": [0, 1, 9, 10, 11, 20, 22, 25, 29, 32, 46, 50], "00001": [0, 22, 25, 32, 39], "1": [0, 9, 12, 14, 20, 22, 25, 28, 29, 32, 34, 37, 39, 42, 47, 48], "drive": [0, 22, 25, 32, 36, 39], "googl": [0, 3, 22, 25, 32, 36, 38, 39, 45], "d": [0, 3, 5, 9, 17, 20, 22, 25, 32, 36, 38, 39, 42, 45, 52], "1mhuqfkhzcyu3bchwmqogiybkjamu5msg": [0, 22, 25, 32, 39], "view": [0, 25, 32, 36], "josh": [0, 1, 5, 9, 10, 20, 23, 32, 43, 46, 48, 50], "moor": [0, 1, 5, 9, 10, 17, 18, 20, 23, 32, 43, 46, 47, 48, 50], "chri": [0, 1, 4, 20, 32, 46, 50], "allan": [0, 1, 4, 20, 32, 46, 50], "s\u00e9bastien": [0, 1, 4, 20, 32, 46, 50], "besson": [0, 1, 4, 20, 32, 46, 50], "jean": [0, 1, 2, 4, 5, 9, 13, 19, 20, 22, 24, 32, 36, 39, 45, 46, 50], "burel": [0, 1, 4, 20, 32, 46, 50], "erin": [0, 1, 4, 20, 32, 46, 50], "diel": [0, 1, 4, 20, 32, 46, 50], "gault": [0, 1, 4, 20, 32, 46, 50], "kozlowski": [0, 1, 4, 20, 32, 46, 50], "dominik": [0, 1, 4, 7, 20, 22, 23, 32, 33, 38, 39, 40, 46, 48, 50], "lindner": [0, 1, 4, 20, 32, 46, 50], "melissa": [0, 1, 4, 20, 32, 43, 46, 50], "linkert": [0, 1, 4, 20, 32, 43, 46, 50], "trevor": [0, 1, 4, 20, 32, 46, 50], "manz": [0, 1, 4, 20, 32, 46, 50], "Will": [0, 1, 4, 20, 32, 46, 50], "constantin": [0, 4, 7, 19, 20, 22, 32, 34, 36, 38, 39, 46, 48, 50], "pape": [0, 4, 7, 19, 20, 22, 32, 34, 36, 38, 39, 40, 46, 48, 50], "jason": [0, 1, 4, 14, 20, 31, 32, 46, 50], "r": [0, 1, 4, 17, 19, 20, 32, 37, 38, 42, 46, 48, 50, 52], "swedlow": [0, 1, 4, 20, 32, 46, 50], "nfdi4bioimag": [0, 1, 9, 22, 23, 25, 26, 29], "021": [0, 1, 4, 10, 14, 19, 20, 29, 32, 34, 43, 46, 50], "01326": [0, 1, 4, 20, 32, 46, 50], "bugra": [0, 24, 36], "oezdemir": [0, 24, 36], "git": [0, 22, 31, 39, 42, 45], "embl": [0, 18, 39], "course_script": [0, 24, 36], "python": [0, 1, 4, 7, 18, 22, 23, 25, 33, 38, 40, 42, 46, 50], "artifici": [1, 3, 7, 11, 12, 14, 17, 19, 20, 24, 34, 36, 45, 52], "intellig": [1, 3, 7, 11, 12, 14, 17, 19, 20, 24, 34, 36, 45, 52], "constantinpap": [1, 34, 36, 38, 39], "resourc": [1, 2, 19, 22, 25, 26, 27, 29, 34, 40, 46, 51], "funk": [1, 19, 22, 36, 38, 39], "morgan": [1, 19, 22, 36, 38, 39], "schwartz": [1, 19, 22, 36, 38, 39], "xiaoyan": [1, 19, 22, 36, 38, 39], "notebook": [1, 2, 3, 5, 7, 9, 13, 14, 18, 20, 22, 30, 32, 36, 38, 40, 42, 44, 45, 50], "jlrumberg": [1, 19, 22, 36, 38, 39], "weigert": [1, 19, 22, 23, 33, 36, 38, 39, 40, 45, 48], "kreshuklab": [1, 7, 19, 24, 36, 38, 48], "christian": [1, 4, 5, 9, 10, 20, 22, 24, 25, 29, 32, 34, 36, 39, 43, 45, 46, 47, 50], "tischer": [1, 4, 5, 9, 20, 22, 24, 25, 29, 32, 34, 36, 39, 45, 46, 50], "adrian": [1, 24, 36, 38, 39], "wolni": [1, 24, 36, 38, 39], "vison": [1, 36, 38, 39], "iv\u00e1n": [2, 14, 19, 32], "hidalgo": [2, 14, 19, 32], "collect": [2, 9, 12, 15, 17, 18, 19, 24, 25, 26, 27, 29, 31, 32, 36, 37, 40, 41, 42, 44, 45, 47, 48, 50, 52], "henriqueslab": [2, 14, 19, 32, 34], "jacob": [2, 32], "deppen": [2, 32], "kimberli": [2, 32], "meechan": [2, 32], "palmquist": [2, 32], "ulf": [2, 32], "schiller": [2, 32], "turner": [2, 32], "mariann": [2, 32], "corvellec": [2, 32], "tobi": [2, 22, 32], "hodg": [2, 22, 32], "analysi": [2, 3, 6, 13, 15, 16, 27, 37], "datacarpentri": [2, 13, 24, 32, 34], "jona": [2, 13, 19, 34, 36, 39, 48], "hartmann": [2, 13, 19, 34, 36, 39, 48], "whoisjack": [2, 13, 19, 34, 36, 39, 48], "codingclub": [2, 13, 19, 36, 48], "bio": [2, 13, 17, 27, 37, 45, 52], "20club": [2, 13, 19, 36, 48], "curat": [2, 13, 14, 19, 22, 25, 32, 36, 46, 47, 48, 50], "20tutori": [2, 13, 19, 36, 48], "wei": [2, 17, 20, 36, 38, 40, 48, 52], "ouyang": [2, 17, 20, 36, 38, 40, 48, 52], "imjoi": [2, 36], "team": [2, 22, 25, 32, 46, 47, 50], "curti": [2, 5, 9, 20, 22, 24, 36, 39, 42, 45], "rueden": [2, 5, 9, 20, 22, 24, 36, 39, 42, 45], "levet": [2, 4, 5, 9, 20, 22, 24, 32, 36, 39, 43, 45], "j": [2, 4, 5, 17, 20, 22, 24, 30, 32, 36, 39, 42, 45, 48, 52], "b": [2, 5, 9, 20, 22, 24, 28, 32, 36, 39, 45], "sibarta": [2, 5, 22, 24, 36, 39, 45], "alexandr": [2, 4, 5, 9, 20, 22, 24, 32, 36, 39, 43, 45], "dafour": [2, 5, 22, 24, 36, 39, 45], "daniel": [2, 4, 5, 9, 14, 17, 19, 20, 22, 24, 32, 34, 36, 39, 43, 45, 48, 52], "sage": [2, 4, 5, 9, 20, 22, 24, 32, 36, 39, 43, 45], "sebastien": [2, 5, 22, 24, 36, 39, 45], "tosi": [2, 5, 22, 24, 36, 39, 45], "michal": [2, 5, 22, 24, 36, 39, 45], "kozubek": [2, 5, 22, 24, 36, 39, 45], "yve": [2, 5, 9, 13, 19, 20, 22, 24, 32, 36, 39, 45], "tinevez": [2, 5, 9, 13, 19, 20, 22, 24, 32, 36, 39, 45], "neubias_bioimage_analyst_course2017": [2, 5, 22, 24, 36, 39, 45], "chong": [2, 4, 5, 9, 13, 19, 20, 22, 32, 36, 39, 43, 45], "zhang": [2, 4, 5, 9, 13, 19, 20, 22, 32, 36, 39, 43, 45], "juliu": [2, 5, 9, 13, 19, 22, 36, 39, 45], "hossein": [2, 5, 9, 13, 19, 22, 36, 39, 45], "pejamn": [2, 5, 9, 13, 19, 22, 36, 39, 45], "rasti": [2, 5, 7, 9, 13, 19, 22, 36, 38, 39, 45, 48], "rousseau": [2, 5, 9, 13, 19, 22, 36, 38, 39, 45], "ignacio": [2, 5, 9, 13, 19, 22, 36, 38, 39, 45], "arganda": [2, 5, 9, 13, 19, 22, 36, 38, 39, 45], "carrera": [2, 5, 9, 13, 19, 22, 36, 38, 39, 45], "neubias_analystschool2019": [2, 5, 9, 13, 19, 22, 36, 39, 45], "marion": [2, 5, 9, 13, 19, 20, 22, 32, 36, 39, 45], "louveaux": [2, 5, 9, 13, 19, 20, 22, 32, 36, 39, 45], "st\u00e9phane": [2, 5, 13, 19, 22, 36, 39, 45], "verger": [2, 5, 13, 19, 22, 36, 39, 45], "ariann": [2, 5, 13, 19, 22, 36, 39, 45], "bercowski": [2, 5, 13, 19, 22, 36, 39, 45], "rama": [2, 5, 13, 19, 22, 36, 39, 45], "estibaliz": [2, 4, 5, 9, 13, 19, 20, 22, 23, 32, 33, 36, 38, 39, 40, 41, 43, 45], "g\u00f3mez": [2, 4, 5, 9, 13, 19, 20, 22, 23, 32, 33, 36, 38, 39, 40, 41, 43, 45], "marisc": [2, 4, 5, 7, 9, 13, 19, 20, 22, 23, 32, 33, 36, 38, 39, 40, 41, 43, 45, 48], "neubias_analystschool2020": [2, 5, 13, 19, 22, 36, 39, 45], "guiwitz": [3, 19, 30, 31, 34, 36, 38, 39, 45, 48], "micpy_workshop_2022": [3, 19, 36, 39, 48], "dlimag": [3, 19, 36, 38, 39, 48], "data": [3, 17, 18, 26, 27, 37, 42, 52], "daskcours": [3, 19, 36, 39, 48], "fundamentals_image_process": [3, 19, 36, 39], "bsd": [3, 9, 12, 14, 16, 19, 20, 22, 39, 42, 45, 47, 48], "3": [3, 9, 12, 13, 14, 19, 20, 22, 25, 29, 34, 38, 39, 42, 44, 45, 47, 48], "claus": [3, 9, 12, 14, 16, 19, 20, 22, 39, 42, 45, 47, 48], "pyimagecourse_beginn": [3, 19, 31, 39, 48], "seri": [3, 19, 34, 48], "expos": [3, 19, 34, 48], "how": [3, 9, 19, 20, 22, 23, 24, 29, 32, 33, 34, 41, 42, 45, 48], "do": [3, 5, 9, 12, 19, 20, 27, 29, 34, 39, 42, 45, 46, 47, 48, 50], "mostli": [3, 19, 27, 32, 34, 44, 48], "basic": [3, 9, 19, 22, 32, 34, 48], "some": [3, 14, 15, 19, 27, 32, 34, 39, 40, 44, 48], "advanc": [3, 19, 34, 36, 48], "It": [3, 19, 22, 27, 32, 34, 48, 52], "standard": [3, 19, 34, 48], "packag": [3, 19, 34, 40, 52], "maplotlib": [3, 19, 34, 48], "part": [3, 19, 34, 48], "heavili": [3, 19, 34, 48], "base": [3, 17, 22, 25, 30, 32, 34, 36, 46, 47, 50, 52], "scikit": [3, 32, 34, 44], "python_image_process": [3, 19, 34, 48], "neubia": [3, 12, 29, 42, 44, 50], "doc": [3, 12, 17, 22, 32, 36, 38, 39, 45, 47], "1q8q1xe": [3, 22, 36, 39, 45], "c35tvcsrxzay98s2uywwxpp0cfcljbmmfpco": [3, 22, 36, 39, 45], "edit": [3, 22, 27, 36, 38, 39, 45], "id": [3, 22, 36, 38, 39, 45], "ga456d5535c_2_53": [3, 22, 36, 39, 45], "numpypandas_cours": [3, 19, 30, 48], "susann": [4, 20, 22, 25, 29, 32, 43, 46, 47, 50], "kuni": [4, 20, 22, 25, 29, 32, 43, 46, 47, 50], "confer": [4, 10, 18, 20, 32, 39, 46, 50], "abstract": [4, 10, 20, 32, 46, 48, 50], "52825": [4, 10, 20, 32, 46, 50], "cordi": [4, 10, 20, 32, 46, 50], "v1i": [4, 10, 20, 32, 46, 50], "285": [4, 10, 20, 32, 46, 50], "mat\u00fa\u0161": [4, 5, 9, 20, 32, 43], "kala\u0161": [4, 5, 9, 20, 32, 43], "joakim": [4, 5, 9, 20, 32, 43], "lindblad": [4, 5, 9, 20, 32, 43], "jone": [4, 5, 9, 14, 19, 20, 30, 32, 34, 39, 43], "nata\u0161a": [4, 5, 9, 20, 32, 43], "sladoj": [4, 5, 9, 20, 32, 43], "moritz": [4, 5, 9, 17, 18, 20, 32, 43, 46, 47, 48, 50], "kirschmann": [4, 5, 9, 20, 32, 43], "anatol": [4, 5, 9, 20, 32, 43], "chessel": [4, 5, 9, 20, 32, 43], "leandro": [4, 5, 9, 20, 32, 43], "scholz": [4, 5, 9, 20, 32, 43], "fabiann": [4, 5, 9, 20, 32, 43], "r\u00f6ssler": [4, 5, 9, 20, 32, 43], "laura": [4, 5, 9, 20, 32, 43], "nicol\u00e1": [4, 5, 9, 20, 32, 43], "s\u00e1enz": [4, 5, 9, 20, 32, 43], "john": [4, 5, 9, 20, 32, 43, 50], "bogov": [4, 5, 9, 20, 32, 43], "dufour": [4, 5, 9, 20, 32, 43], "xavier": [4, 5, 9, 20, 32, 43], "heiligenstein": [4, 5, 9, 20, 32, 43], "domin": [4, 5, 9, 19, 20, 32, 39, 43, 48], "waith": [4, 5, 9, 19, 20, 32, 39, 43, 48], "charlott": [4, 5, 9, 20, 32, 43], "domart": [4, 5, 9, 20, 32, 43], "matthia": [4, 5, 9, 20, 32, 43], "karreman": [4, 5, 9, 20, 32, 43], "raf": [4, 5, 9, 20, 32, 43], "van": [4, 5, 9, 20, 32, 43], "pla": [4, 5, 9, 20, 32, 43], "h\u00f6rl": [4, 5, 9, 20, 32, 43], "lassi": [4, 5, 9, 20, 32, 43], "paavolainen": [4, 5, 9, 20, 32, 43], "ivana": [4, 5, 9, 20, 32, 43], "vrhovac": [4, 5, 9, 20, 32, 43], "maduni\u0107": [4, 5, 9, 20, 32, 43], "dean": [4, 5, 9, 20, 32, 43], "karaica": [4, 5, 9, 20, 32, 43], "arrat": [4, 5, 9, 20, 32, 43], "mu\u00f1oz": [4, 5, 9, 20, 32, 43], "barrutia": [4, 5, 9, 20, 32, 43], "sampaio": [4, 5, 9, 20, 32, 43], "sebastian": [4, 5, 9, 10, 19, 20, 29, 32, 43, 48, 50], "munck": [4, 5, 9, 20, 32, 43], "ofra": [4, 5, 9, 20, 32, 39, 43, 45], "golani": [4, 5, 9, 20, 32, 39, 43, 45], "jon": [4, 5, 9, 20, 32, 43], "ison": [4, 5, 9, 20, 32, 43], "alban": [4, 5, 9, 20, 32, 43], "gaignard": [4, 5, 9, 20, 32, 43], "herv\u00e9": [4, 5, 9, 20, 32, 43], "m\u00e9nager": [4, 5, 9, 20, 32, 43], "julien": [4, 5, 9, 20, 32, 39, 43, 45], "colombelli": [4, 5, 9, 20, 32, 39, 43, 45], "perrin": [4, 5, 9, 20, 32, 39, 43, 45], "paul": [4, 5, 9, 20, 32, 39, 43, 45], "gilloteaux": [4, 5, 9, 20, 32, 39, 43, 45], "meta": [4, 5, 9, 10, 26, 29, 32, 37, 50], "poster": [4, 5, 9, 20, 27, 32, 42, 43, 46], "f1000research": [4, 5, 9, 20, 22, 23, 32, 33, 38, 39, 40, 41, 43, 45, 46, 48, 50, 51], "162": [4, 5, 9, 20, 32, 43], "ceur": [4, 10, 20, 32, 46], "ws": [4, 10, 20, 32, 46], "vol": [4, 10, 20, 32, 46], "3415": [4, 10, 20, 32, 46], "paper": [4, 10, 20, 32, 46], "27": [4, 10, 20, 32, 46], "pdf": [4, 5, 10, 12, 16, 20, 22, 29, 32, 36, 38, 39, 45, 46, 50], "schmidt": [4, 7, 9, 10, 19, 20, 22, 25, 29, 32, 36, 38, 39, 42, 43, 45, 46, 47, 48, 50], "janina": [4, 20, 32, 46, 50], "hann": [4, 20, 32, 46, 50], "meester": [4, 20, 32, 46, 50], "elisa": [4, 10, 20, 22, 25, 32, 46, 47, 50], "ferrando": [4, 10, 20, 22, 25, 32, 46, 47, 50], "mai": [4, 7, 10, 20, 22, 23, 25, 32, 33, 34, 36, 39, 40, 46, 47, 48, 50], "stefani": [4, 10, 20, 22, 25, 29, 32, 43, 46, 47, 50], "weidtkamp": [4, 10, 20, 22, 25, 29, 32, 43, 46, 47, 50], "peter": [4, 9, 10, 14, 17, 18, 19, 20, 22, 23, 25, 29, 31, 32, 39, 43, 44, 45, 46, 47, 48, 50], "member": [4, 20, 22, 32, 46, 50], "initi": 4, "11": [4, 9, 20, 22, 25, 32, 36, 39, 46, 47, 50], "638": [4, 20, 32, 46, 50], "marconato": [4, 20, 32, 48], "giovanni": [4, 20, 32, 48], "palla": [4, 20, 32, 48], "yamauchi": [4, 12, 17, 19, 20, 32, 39, 44, 45, 48, 50], "isaac": [4, 20, 32, 48], "virshup": [4, 20, 32, 48], "elya": [4, 20, 32, 48], "heidari": [4, 20, 32, 48], "tim": [4, 12, 14, 19, 20, 32, 34, 39, 48], "trei": [4, 20, 32, 48], "marcella": [4, 20, 32, 48], "toth": [4, 20, 32, 48], "rahul": [4, 20, 32, 48], "shrestha": [4, 20, 32, 48], "harald": [4, 20, 32, 48], "v\u00f6hringer": [4, 20, 32, 48], "wolfgang": [4, 20, 32, 48], "huber": [4, 20, 32, 48], "gerstung": [4, 20, 32, 48], "fabian": [4, 20, 32, 48], "thei": [4, 9, 20, 22, 27, 32, 37, 39, 48, 50], "oliv": [4, 14, 19, 20, 32, 34, 48], "stegl": [4, 20, 32, 48], "preprint": [4, 20, 30, 32, 39, 48, 51], "biorxiv": [4, 14, 19, 20, 30, 32, 34, 39, 48, 51], "1101": [4, 14, 19, 20, 30, 32, 34, 39, 48, 51], "2023": [4, 6, 9, 11, 14, 22, 23, 25, 30, 33, 34, 39, 40, 44, 51], "05": [4, 6, 9, 11, 20, 30, 32, 39, 44, 48, 50], "539647v1": [4, 20, 32, 48], "keynot": [4, 23, 32, 50], "hand": [4, 23, 24, 32, 39, 41, 50], "meet": [4, 22, 23, 50], "d\u00fcsseldorf": [4, 23, 32, 50], "germani": [4, 22, 23, 25, 32, 37, 46, 47, 50], "octob": [4, 23, 32, 50], "16": [4, 22, 23, 32, 39, 50], "zenodo": [4, 10, 12, 13, 14, 16, 22, 23, 24, 25, 33, 38, 39, 41, 46, 47, 48, 52], "record": [4, 9, 10, 12, 13, 14, 16, 22, 23, 24, 25, 32, 33, 39, 41, 46, 47, 48, 50, 52], "10008465": [4, 23, 32, 50], "book": [5, 13, 19, 24, 29, 31, 32, 34, 36, 37, 38, 39, 42, 44, 45, 48, 50], "ij_textbook1": [5, 12, 29, 39], "analyticalsci": [5, 9, 12, 20, 29, 39, 42, 45, 46, 47, 50], "wa": [5, 9, 12, 20, 29, 39, 42, 45, 46, 47, 50], "00050003": [5, 12, 29, 39, 45], "bioimagedataanalysi": [5, 12, 29, 39, 45], "s": [5, 17, 18, 29, 37, 43, 45, 48], "A": [5, 18, 24, 25, 26, 29, 34, 43, 45, 47, 48], "bias_nucleus_segment": [5, 12, 24, 36, 39, 45], "fabric": [5, 9, 20, 32, 39, 45], "cordeli\u00e8r": [5, 9, 20, 32, 39, 45], "rocco": [5, 9, 20, 32, 39, 45], "antuono": [5, 9, 20, 32, 39, 45], "romain": [5, 9, 14, 19, 20, 32, 34, 39, 45], "guiet": [5, 9, 20, 32, 39, 45], "h": [5, 9, 17, 18, 20, 32, 37, 39, 45, 46, 47, 48, 50], "2021": [5, 9, 11, 30, 45, 51], "334": [5, 9, 20, 32, 39, 45], "v1": [5, 9, 20, 32, 39, 45], "et": [5, 9, 12, 13, 14, 17, 19, 20, 22, 24, 29, 31, 32, 36, 39, 42, 43, 45, 48, 50, 52], "al": [5, 9, 12, 13, 14, 17, 19, 20, 22, 24, 28, 29, 31, 32, 36, 39, 42, 43, 45, 48, 50, 52], "code": [5, 9, 22, 24, 32, 34, 45], "dropbox": [5, 22, 36, 39, 45], "5abw3cvxrhpobg4": [5, 22, 36, 39, 45], "20220923_defragmentationt": [5, 22, 36, 39, 45], "dl": [5, 7, 23, 33, 34, 40, 41, 45, 48], "bioimag": [6, 11, 16, 37, 47], "blog": [6, 9, 26, 27, 32, 38, 39, 44, 47, 48, 50, 51], "focalplan": [6, 9, 11, 32, 39, 44, 48, 50, 51], "biologist": [6, 9, 11, 32, 39, 44, 50, 51], "03": [6, 11, 39, 44, 48], "30": [6, 11, 39, 44, 48], "conda": 6, "mamba": 6, "biapol": [6, 9, 11, 18, 19, 32, 38, 39, 44, 47, 48], "github": [6, 9, 11, 12, 17, 18, 19, 20, 22, 23, 26, 27, 31, 32, 34, 37, 38, 39, 40, 42, 44, 45, 47, 48, 50, 51, 52], "io": [6, 9, 11, 12, 14, 16, 17, 18, 19, 20, 22, 23, 24, 29, 31, 32, 38, 39, 40, 42, 44, 45, 47, 48, 50, 51, 52], "mara_lampert": [6, 11, 32, 48], "getting_started_with_mambaforge_and_python": [6, 11, 32, 48], "readm": [6, 9, 11, 32, 38, 39, 47, 48], "html": [6, 9, 11, 12, 14, 15, 16, 17, 18, 19, 20, 24, 31, 32, 36, 38, 39, 40, 42, 44, 45, 47, 48, 50, 51], "04": [6, 9, 11, 13, 32, 39, 44, 48, 50, 51], "13": [6, 11, 22, 25, 32, 33, 39, 40, 41, 44, 47, 48, 50], "02": [6, 9, 11, 32, 39, 44, 48, 50, 51], "anisotropi": [6, 11, 39, 44, 48], "06": [6, 9, 11, 20, 30, 32, 37, 39, 44, 48, 50], "01": [6, 9, 11, 18, 22, 36, 39, 42, 44, 48], "maweigert": [7, 19, 22, 36, 38, 39, 45, 48], "embo_2022": [7, 19, 36, 38, 39, 48], "uw": [7, 19, 22, 36, 38, 39, 45, 48], "fiji": [7, 17, 22, 31, 36, 38, 45, 52], "zidas_2020_dl_intro_part_2": [7, 19, 36, 38, 39], "valentyna": [7, 19, 36, 38, 48], "zinchenko": [7, 19, 36, 38, 48], "pejman": [7, 19, 36, 38, 39, 48], "szymon": [7, 19, 36, 38, 48], "stoma": [7, 19, 36, 38, 48], "teach": [7, 9, 19, 22, 40, 44, 47, 50], "benjamin": [7, 19, 22, 36, 38, 39, 45, 48], "galluss": [7, 19, 36, 38, 48], "albert": [7, 19, 32, 36, 38, 39, 42, 48], "dominguez": [7, 19, 36, 38, 48], "mant": [7, 19, 36, 38, 48], "buglakova": [7, 19, 24, 36, 38, 48], "alyona": [7, 19, 24, 36, 38, 48], "andrii": [7, 23, 33, 40, 48], "iudin": [7, 23, 33, 40, 48], "foix": [7, 23, 33, 40, 48], "romero": [7, 23, 33, 40, 48], "kreshuk": [7, 9, 13, 19, 20, 22, 23, 32, 33, 39, 40, 45, 48], "awai": [7, 23, 33, 40, 48], "athar": [7, 23, 33, 40, 48], "kutra": [7, 22, 23, 32, 33, 38, 39, 40, 48], "estibali": [7, 23, 33, 40, 48], "gomez": [7, 23, 33, 40, 48], "franc": [7, 10, 20, 23, 29, 33, 40, 43, 48, 50], "wong": [7, 10, 20, 23, 29, 33, 40, 43, 48, 50], "guillaum": [7, 14, 19, 22, 23, 30, 31, 33, 34, 36, 38, 39, 40, 45, 48], "jacquemet": [7, 14, 19, 23, 33, 34, 40, 48], "kedar": [7, 23, 33, 40, 48], "narayan": [7, 23, 33, 40, 48], "nodar": [7, 23, 33, 40, 48], "gogoberidz": [7, 23, 33, 40, 48], "osman": [7, 23, 33, 40, 48], "salih": [7, 23, 33, 40, 48], "petr": [7, 23, 33, 40, 48], "walczysko": [7, 23, 33, 40, 48], "conrad": [7, 23, 33, 40, 48], "simon": [7, 23, 33, 40, 48], "weyend": [7, 23, 33, 40, 48], "sriram": [7, 23, 33, 40, 48], "sundar": [7, 23, 33, 40, 48], "somasundharam": [7, 23, 33, 40, 48], "suganya": [7, 20, 23, 30, 33, 39, 40, 48], "sivagurunathan": [7, 20, 23, 30, 33, 39, 40, 48], "ugi": [7, 20, 23, 29, 33, 40, 43, 48, 50], "sarkan": [7, 20, 23, 29, 33, 40, 43, 48, 50], "BY": [7, 9, 12, 13, 14, 17, 18, 19, 20, 23, 24, 25, 28, 31, 32, 33, 34, 37, 39, 40, 41, 46, 47, 48, 50], "The": [7, 13, 17, 19, 22, 23, 27, 33, 40, 44, 46, 47, 48, 50, 52], "focus": [7, 9, 23, 32, 33, 40, 41, 48, 50], "introduc": [7, 9, 22, 23, 32, 33, 40, 41, 48], "programmat": [7, 23, 33, 40, 48], "approach": [7, 22, 23, 32, 33, 40, 48], "via": [7, 17, 19, 23, 32, 33, 40, 44, 48, 52], "ran": [7, 23, 33, 40, 48], "olivi": [7, 19, 22, 36, 38, 39, 45, 48], "burri": [7, 19, 22, 36, 38, 39, 45, 48], "neubias_academy_stardist": [7, 19, 22, 36, 38, 39, 45, 48], "deborah": [9, 20, 42], "wayn": [9, 20, 42], "rasband": [9, 20, 42], "pavel": [9, 20, 42], "tomancak": [9, 20, 42], "eugen": [9, 20, 42], "myer": [9, 20, 42], "figshar": [9, 20, 42], "i2k_poster_haase_v6_imagej_repro_pdf": [9, 20, 42], "7409525": [9, 20, 42], "llm": [9, 22, 32, 48], "chang": [9, 22, 27, 32, 48], "wai": [9, 19, 22, 24, 32, 39, 44, 48, 50, 51], "also": [9, 17, 19, 22, 27, 32, 44, 48, 52], "ha": [9, 22, 25, 32, 37, 46, 47, 48, 50], "impact": [9, 22, 32, 48], "commun": [9, 12, 24, 47, 48, 52], "can": [9, 14, 19, 20, 22, 26, 27, 32, 34, 37, 39, 48, 50], "analyz": [9, 17, 19, 20, 22, 32, 42, 44, 48, 52], "biomed": [9, 17, 22, 32, 48, 52], "ask": [9, 22, 32, 48], "prompt": [9, 22, 32, 48], "talk": [9, 22, 32, 48], "outlin": [9, 16, 20, 22, 29, 32, 39, 45, 48, 50], "principl": [9, 14, 22, 23, 24, 32, 33, 37, 39, 40, 48, 50], "explain": [9, 14, 20, 22, 24, 25, 29, 32, 42, 45, 48, 50, 51], "engin": [9, 17, 20, 22, 32, 36, 38, 40, 42, 48], "compar": [9, 22, 23, 32, 48], "differ": [9, 14, 15, 23, 39, 40, 48], "vendor": [9, 22, 32, 48], "perform": [9, 19, 22, 32, 34, 39, 44, 47, 48], "task": [9, 22, 32, 48], "ar": [9, 14, 15, 22, 23, 26, 27, 32, 33, 34, 37, 39, 40, 41, 47, 48], "ahead": [9, 22, 32, 48], "10815329": [9, 22, 32, 48], "scad": [9, 19, 32, 40, 48], "ai": [9, 17, 19, 32, 48, 52], "leipzig": [9, 19, 32, 40, 48], "repositori": [9, 19, 23, 24, 26, 27, 32, 34, 37, 39, 40, 47, 48, 50, 51], "contain": [9, 17, 19, 26, 27, 32, 37, 39, 40, 48, 52], "student": [9, 19, 32, 40, 48], "uni": [9, 17, 19, 20, 32, 40, 42, 46, 48, 50, 52], "who": [9, 19, 32, 40, 48], "want": [9, 19, 27, 32, 40, 48], "dive": [9, 19, 32, 40, 48], "deep": [9, 15, 17, 25, 52], "bid": [9, 19, 32, 40, 48], "2024": [9, 23, 24, 34, 36, 37, 39, 40, 41, 47, 50], "poetsch": [9, 19, 32, 39, 44, 48], "biotec": [9, 19, 32, 39, 44, 48], "marcelo": [9, 11, 19, 32, 38, 39, 44, 48], "leomil": [9, 19, 32, 39, 44, 48], "zoccol": [9, 11, 19, 32, 38, 39, 44, 48], "johann": [9, 19, 20, 24, 29, 32, 36, 38, 39, 44, 48, 50], "richard": [9, 13, 19, 20, 22, 32, 36, 39, 44, 45, 48, 50], "m\u00fcller": [9, 19, 32, 39, 44, 48], "napari": [9, 12, 25, 45, 50], "image_analysis_with_python": [9, 19, 32, 39, 44, 48], "omero": [9, 18, 37], "robert_haas": [9, 11, 32, 47, 48], "browsing_idr": [9, 11, 32, 47, 48], "loic": [9, 14, 19, 20, 29, 34, 39, 42], "royer": [9, 14, 19, 20, 29, 34, 39, 42], "publish": [9, 12, 13, 22, 24, 25, 30, 32, 36, 42, 43, 45, 46, 47, 50, 52], "function": [9, 20, 29, 37, 39, 42], "graphic": [9, 20, 29, 39, 42], "unit": [9, 20, 29, 39, 42], "1038": [9, 14, 19, 20, 29, 34, 39, 42, 43], "019": [9, 20, 29, 39, 42], "0650": [9, 20, 29, 39, 42], "12": [9, 11, 22, 32, 38, 39, 46, 48, 50], "1054": [9, 22, 32, 46, 50], "soltwedel": [9, 19, 20, 32, 39, 48, 50], "common": [9, 14, 20, 23, 24, 25, 28, 32, 39, 41, 45, 50], "reason": [9, 20, 32, 39, 50], "found": [9, 20, 32, 39, 50], "servic": [9, 20, 32, 39, 50], "provid": [9, 14, 17, 20, 22, 32, 36, 37, 39, 42, 50, 52], "fulfil": [9, 20, 32, 39, 50], "certain": [9, 20, 32, 39, 50], "need": [9, 32, 37, 50], "conflict": [9, 20, 23, 32, 33, 39, 41, 50], "interest": [9, 20, 32, 39, 50], "aris": [9, 20, 32, 39, 50], "1111": [9, 10, 17, 20, 32, 39, 42, 50, 52], "jmi": [9, 10, 17, 20, 32, 39, 42, 50, 52], "13192": [9, 20, 32, 39, 50], "version": [9, 11, 32, 50, 51], "control": [9, 11, 19, 30, 32, 39, 50, 51], "09": [9, 11, 32, 50, 51], "In": [9, 19, 22, 23, 26, 27, 32, 34, 39, 44, 47, 48], "current": [9, 20, 23, 29, 32, 33, 41, 50], "potenti": [9, 23, 26, 32, 33, 34, 37, 39, 41, 47, 48, 50], "solut": [9, 23, 33, 34, 39, 41, 47, 48], "openli": [9, 22, 23, 25, 27, 32, 33, 41, 46, 47, 50], "softli": [9, 23, 32], "field": [9, 23, 32], "lot": [9, 23, 32], "circul": [9, 23, 32], "privat": [9, 23, 32], "channel": [9, 23, 32], "reusabl": [9, 22, 23, 25, 32, 37, 46, 47, 50], "accord": [9, 23, 32], "fair": [9, 32, 33, 37, 40], "still": [9, 23, 32], "rare": [9, 23, 32], "publicli": [9, 23, 32], "acess": [9, 23, 32], "propos": [9, 23, 27, 32], "fill": [9, 23, 32], "gap": [9, 23, 32], "10654775": [9, 23, 32], "over": [9, 22, 23, 32, 33, 41, 50, 52], "11066250": [9, 23, 33, 41, 50], "write": [9, 23, 27, 33, 50], "plan": [9, 22, 23, 32, 33], "10970869": [9, 23, 33, 50], "ann": [9, 12, 14, 15, 20, 30, 32, 39, 45], "e": [9, 14, 15, 20, 25, 27, 28, 30, 32, 37, 39, 45, 50], "carpent": [9, 14, 15, 20, 30, 32, 39, 45], "bankhead": [9, 12, 14, 19, 20, 22, 31, 32, 39, 42, 45, 48], "practic": [9, 22, 25, 33, 34, 40, 46, 47], "302": [9, 20, 32, 45], "971": [9, 22, 32, 38, 39, 48], "post": [9, 11, 26, 27, 32, 47, 50, 51], "what": [9, 11, 32, 37, 50], "import": [9, 11, 16, 32, 50], "itll": [9, 11, 32, 50], "rhaas": [9, 22, 31, 39, 42, 45], "lecture_imagej2_dev": [9, 22, 31, 39, 42, 45], "benoit": [9, 22, 36, 39, 42], "lombardot": [9, 22, 36, 39, 42], "nc": [9, 14, 25, 39, 42], "mpicbg": [9, 39, 42], "scicomp": [9, 22, 36, 39, 42], "courseintrotoia": [9, 39, 42], "bioimage_team": [9, 22, 36, 39, 42], "coursematerialimageanalysi": [9, 22, 36, 39, 42], "tree": [9, 22, 36, 39, 42], "master": [9, 22, 36, 38, 39, 42], "imagejmacro_24h_2017": [9, 22, 36, 39, 42], "pr": [9, 23, 33, 41, 50], "solv": [9, 23, 33, 41, 50], "merg": [9, 23, 27, 33, 41, 50], "upload": [9, 23, 33, 34, 39, 41, 47, 48, 50], "10972692": [9, 23, 33, 41, 50], "other": [9, 22, 27, 37, 39, 42], "exercis": [9, 23, 24, 30, 40, 41, 42, 50], "cmcb": [9, 22, 39, 42], "tu": [9, 28, 36, 37, 39, 42], "lecture_applied_bioimage_analysi": [9, 22, 39, 42], "08": [9, 11, 22, 32, 46, 48, 50], "anjali": [9, 20, 32, 39], "schlaeppi": [9, 20, 32, 39], "wilson": [9, 20, 32, 39], "huisken": [9, 20, 32, 39], "macdonald": [9, 20, 32, 39], "elisabeth": [9, 11, 20, 32, 39, 50, 51], "kugler": [9, 11, 20, 32, 39, 50, 51], "frontiersin": [9, 20, 32, 39], "3389": [9, 20, 32, 39], "fbinf": [9, 20, 32, 39], "889755": [9, 20, 32, 39], "session": [9, 22, 31, 32, 39, 42, 45], "multiview": [9, 22, 31, 39, 42, 45], "lecture_multiview_registr": [9, 22, 31, 39, 42, 45], "access": [9, 14, 15, 17, 23, 27, 33, 37, 39, 40, 41, 42, 48, 52], "10990107": [9, 23, 33, 41, 50], "hohlbein": [9, 20, 29], "benedict": [9, 20, 29], "diederich": [9, 20, 29], "barbora": [9, 20, 29], "marsikova": [9, 20, 29], "emmanuel": [9, 20, 29], "reynaud": [9, 20, 29], "s\u00e9amu": [9, 14, 19, 20, 29, 34], "holden": [9, 14, 19, 20, 29, 34], "wiebk": [9, 20, 29], "jahr": [9, 20, 29], "kirti": [9, 20, 29], "prakash": [9, 20, 29], "comment": [9, 20, 29], "state": [9, 20, 29], "art": [9, 20, 28, 29], "hardwar": [9, 20, 29], "context": [9, 20, 27, 29, 37], "022": [9, 17, 20, 29, 42, 52], "01602": [9, 20, 29], "1171": [9, 22, 32], "7490": [9, 22, 32], "1119154": [9, 22, 32], "519": [9, 22, 32, 50, 51], "15": [9, 32, 50, 51], "background": [9, 19, 20, 29, 40, 42, 48], "0004000112": [9, 20, 29, 42], "cell": [9, 13, 19, 22, 31, 40, 42, 45, 48], "lecture_tracking_trackm": [9, 22, 31, 39, 42, 45], "lecture_working_with_objects_in_2d_and_3d": [9, 22, 31, 39, 42, 45], "lecture_working_with_pixel": [9, 22, 31, 39, 42, 45], "tom": [10, 17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "boissonnet": [10, 17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "dohl": [10, 20, 22, 25, 32, 46, 47, 50], "karen": [10, 20, 46, 50], "bernhardt": [10, 20, 46, 50], "tobia": [10, 20, 50], "wernet": [10, 20, 50], "13317": [10, 20, 50], "h\u00e4nsch": [10, 20, 29, 43, 50], "01288": [10, 20, 29, 43, 50], "z": [10, 20, 28, 29, 43, 50], "hensel": [10, 20, 46, 50], "unclear": [10, 20, 46, 50], "1515": [10, 20, 46, 50], "hsz": [10, 20, 46, 50], "0304": [10, 20, 46, 50], "7018929": [10, 25, 32, 46, 50], "mara": [11, 32, 39, 44, 48], "lampert": [11, 32, 39, 44, 48], "introduct": [11, 23, 33, 41, 44, 46, 50, 51], "reproduc": [11, 17, 23, 33, 39, 40, 41, 47, 48, 50, 51], "job": [11, 50], "fermi": [11, 50], "delmic": [11, 50], "jennif": [11, 50], "water": [11, 50], "datamanag": [11, 50], "hm": [11, 50], "harvard": [11, 50], "edu": [11, 50], "new": [11, 27, 50], "marcelo_zoccol": [11, 32, 38, 39, 48], "omero_script": [11, 32, 38, 39, 48], "07": [11, 50, 51], "26": [11, 50, 51], "haesleinhuepf": [12, 19, 31, 39, 48], "bioimageanalysisnotebook": [12, 19, 31, 39, 48], "intro": [12, 18, 19, 31, 32, 39, 45, 48, 50], "bornholdt": [12, 36, 38, 39], "juan": [12, 19, 30, 36, 38, 39, 48], "caicedo": [12, 36, 38, 39], "yu": [12, 24, 36, 38, 39], "han": [12, 36, 38, 39], "nikita": [12, 36, 38, 39], "moshkov": [12, 36, 38, 39], "rebecca": [12, 14, 20, 31, 36, 38, 39], "senft": [12, 14, 20, 31, 36, 38, 39], "cytomin": [12, 36, 38, 39], "00": [12, 36, 38, 39], "welcom": [12, 27, 36, 37, 38, 39], "becker": [12, 39], "shantanu": [12, 39], "singh": [12, 39], "gregori": [12, 39], "hamdah": [12, 39], "abbasi": [12, 39], "callum": [12, 39], "troman": [12, 39], "coia": [12, 39], "cc0": [12, 14, 15, 19, 39, 40, 42], "pete": [12, 19, 32, 39, 42, 48], "imagej": [12, 16, 19, 29, 31, 32, 48], "bioimagebook": [12, 19, 32, 39, 42, 48], "index": [12, 19, 32, 37, 42, 48], "kevinyamauchi": [12, 17, 19, 32, 39, 44, 45, 48, 50], "scienceeurop": [12, 32], "our": [12, 27, 37], "5281": [12, 13, 22, 25, 32, 38, 39, 46, 47, 50, 52], "4915861": [12, 32], "rougier": [12, 48], "nd": [12, 14, 19, 25, 32, 39, 44, 48], "sa": [12, 14, 20, 39, 44, 46, 48, 50], "inria": [12, 48], "hal": [12, 48], "03427242": [12, 48], "document": [12, 18, 20, 27, 38, 42, 46, 50], "wheeler": 12, "editor": 12, "ricardo": [12, 14, 19, 34], "henriqu": [12, 14, 19, 34], "en": [12, 14, 16, 17, 36, 47, 48, 52], "3a": 12, "9781119096900": 12, "stephen": [12, 13, 17, 19, 20, 39, 42, 52], "royl": [12, 13, 39], "cshlpress": [12, 39], "default": [12, 39], "tpl": [12, 39], "cart": [12, 39], "1700309488232283050": [12, 39], "fromlink": [12, 39], "linkact": [12, 39], "linksortbi": [12, 39], "oop_titl": [12, 39], "eqskudatarq": [12, 39], "1282": [12, 39], "cover": [12, 34], "topic": [12, 27, 34, 36, 39], "relat": [12, 27, 34, 37], "skill": [12, 22, 32, 34], "tool": [12, 17, 22, 23, 25, 33, 34, 40, 41, 45, 48, 52], "best": [12, 22, 25, 32, 34, 46, 47, 50], "netlifi": [12, 24, 34, 50, 51], "app": [12, 24, 34, 50, 51], "biernacka": [12, 16, 32, 50], "katarzyna": [12, 16, 32, 50], "bierwirth": [12, 32, 50], "maik": [12, 32, 50], "buchholz": [12, 14, 19, 32, 34, 50], "petra": [12, 32, 50], "dolzycka": [12, 32, 50], "dominika": [12, 32, 50], "helbig": [12, 16, 32, 50], "kerstin": [12, 16, 32, 50], "neumann": [12, 32, 50], "janna": [12, 32, 50], "odebrecht": [12, 32, 50], "carolin": [12, 32, 50], "wilj": [12, 32, 50], "cord": [12, 32, 50], "wuttk": [12, 32, 50], "materi": [12, 26, 27, 33, 40, 41, 42], "from": [12, 24, 29, 34, 41, 46, 47, 48, 50], "fdmentor": [12, 32, 50], "4071471": [12, 32, 50], "semest": [13, 24, 34], "biologi": [13, 14, 24, 25, 34], "ahklemm": [13, 22, 36, 39, 45], "imagejmacro_introduct": [13, 22, 36, 39, 45], "assaf": [13, 19, 22, 36, 39, 45], "zaritski": [13, 19, 22, 36, 39, 45], "csaba": [13, 19, 22, 36, 39, 45], "molnar": [13, 19, 22, 36, 39, 45], "vasja": [13, 19, 22, 36, 39, 45], "urbanc": [13, 19, 22, 36, 39, 45], "butler": [13, 19, 22, 36, 39, 45], "vannari": [13, 19, 22, 36, 39, 45], "mea": [13, 19, 22, 36, 39, 45], "yedid": [13, 19, 22, 36, 39, 45], "neubias_analystschool2018": [13, 19, 22, 36, 39, 45], "janeliascicomp": [13, 24, 36], "nf": [13, 14, 36, 48], "karin": [13, 14, 19, 34, 36, 48], "sasaki": [13, 19, 36, 48], "karinsasaki": [13, 19, 36, 48], "marionlouveaux": [13, 36, 39, 45], "neubias2018_ts7": [13, 36, 39, 45], "17": [13, 22, 32, 39, 52], "gpl": [13, 14, 19, 39, 44, 48], "digit": [13, 17, 20, 42, 52], "2643411": [13, 39], "barbara": [14, 20, 31], "diaz": [14, 20, 31], "rohrer": [14, 20, 31], "pina": [14, 20, 31], "colarusso": [14, 20, 31], "luci": [14, 20, 31], "swift": [14, 20, 31], "nasim": [14, 20, 30, 31, 39], "jamali": [14, 20, 30, 31, 39], "thoma": [14, 20, 22, 25, 29, 30, 31, 32, 39, 43, 46, 47, 50], "pengo": [14, 20, 31, 43], "craig": [14, 17, 20, 31, 40, 48, 52], "brideau": [14, 20, 31], "virgini": [14, 20, 31], "uhlmann": [14, 20, 31], "kirk": [14, 20, 31], "andrew": [14, 20, 31], "gonzal": [14, 20, 31], "edward": [14, 20, 31], "l": [14, 15, 19, 20, 22, 25, 30, 31, 32, 34, 39, 46, 47, 50], "evan": [14, 20, 22, 31, 32, 52], "iii": [14, 20, 31], "1371": [14, 20, 31], "journal": [14, 20, 31], "pbio": [14, 20, 31], "3002167": [14, 20, 31], "bioimagingguid": [14, 20, 31], "vebjorn": [14, 15], "ljosa": [14, 15], "katherin": [14, 15], "sokolnicki": [14, 15], "broad": [14, 15, 22, 25, 32, 46, 47, 50], "benchmark": [14, 15], "bbbc": [14, 15], "nmeth": [14, 15, 20], "2083": [14, 15], "broadinstitut": [14, 15], "watch": [14, 25, 39, 48, 50], "v": [14, 25, 39, 48, 50], "2dbkuwkk4": [14, 25, 39], "pl5esqnfm5lc7samsteu082ivw4bdmvd0u": [14, 25, 39], "licenc": [14, 15, 39, 40], "avail": [14, 15, 22, 25, 26, 39, 40, 46, 47, 50], "under": [14, 15, 37, 39, 40], "so": [14, 15, 37, 39, 40], "indic": [14, 15, 39, 40], "attribut": [14, 15, 23, 24, 25, 39, 40, 41, 50], "visualis": [14, 15, 39], "vem": [14, 15, 39], "odc": [14, 39], "biii": [14, 39], "eu": [14, 17, 20, 36, 38, 39, 52], "publict": [14, 15], "sciencedirect": [14, 15], "ab": [14, 15, 20, 39], "pii": [14, 15], "s0022283622000791": [14, 15], "fabrizio": [14, 39, 44, 48], "musacchio": [14, 39, 44, 48], "fabriziomusacchio": [14, 39, 44, 48], "teaching_bioimage_analysi": [14, 39, 44, 48], "cobacenterforopenbioimagea1864": [14, 25, 39], "eoss": [14, 22, 32, 39], "celltrackingchalleng": [14, 15, 36, 39], "net": [14, 15, 16, 36, 39], "20": [14, 19, 34], "563252v2": [14, 19, 34], "guijacquemet": [14, 19, 34], "celltrackscolab": [14, 19, 34], "zmb": 14, "dozuki": 14, "image_analysi": 14, "chrishavlin": [14, 25, 36, 39, 44, 48], "playlist": [14, 22, 25, 29, 32, 36, 39, 44, 46, 47, 48, 50], "plqbhamyzu5kxuacnnbixybkivueikswq1": [14, 25, 36, 39, 44, 48], "sreeni": [14, 25, 48], "bhattiprolu": [14, 19, 25, 36, 39, 48], "gener": [14, 25, 47], "process": [14, 25], "machin": [14, 25], "a4po9z61tm": [14, 25, 48], "eurobioimagingcommun": [14, 25], "isabel": [14, 20, 23, 24, 39, 41, 50], "kemmer": [14, 20, 23, 24, 39, 41, 50], "creativ": [14, 23, 24, 25, 28, 39, 41, 50], "intern": [14, 18, 23, 24, 25, 39, 41, 50], "dmp": [14, 24, 39, 41, 50], "question": [14, 22, 24, 32, 39, 41, 50], "tailor": [14, 22, 24, 25, 32, 39, 41, 46, 47, 50], "11473803": [14, 24, 39, 41, 50], "8zd4kty": [14, 25, 39, 50], "oyi": [14, 25, 39, 50], "plw": [14, 25, 39, 50], "oxncaxrqu4xqdujzwfhvwlf06pvdvm": [14, 25, 39, 50], "pl5edc1v41fyclfzbbclo41zfo": [14, 25, 39], "_cxbfab": [14, 25, 39], "domain": [14, 50], "inform": [14, 19, 22, 25, 32, 46, 47, 48, 50], "portal": [14, 50], "german": [14, 32, 36, 37, 50], "wiki": [14, 32, 50], "scientif": [14, 17], "compani": [14, 36], "gmb": [14, 36, 50], "globalbioimag": [14, 18, 25, 39], "i3dbio": [14, 22, 25, 32, 36, 46, 47, 50], "mat": [14, 36, 50], "bioimagelist": [14, 36, 50], "deed": [14, 25, 39], "idr": [14, 15, 20, 25, 47], "openmicroscopi": [14, 15, 17, 18, 20, 32, 47, 50], "4326": [14, 15, 20], "oxinst": [14, 25, 29, 39], "user": [14, 52], "melbourneadvancedmicroscop2617": [14, 25, 39], "webinar": [14, 25, 45, 47], "where": [14, 22, 25, 32, 45, 46, 47, 50], "author": [14, 25, 26, 27, 45], "softwar": [14, 17, 19, 25, 27, 44, 46, 47, 48, 52], "effort": [14, 48], "pipelin": [14, 20, 42], "built": [14, 48], "co": [14, 48], "re": [14, 27, 48], "2": [14, 16, 19, 22, 39, 45, 47, 48], "readthedoc": [14, 16, 17, 36, 47, 48, 52], "latest": [14, 16, 47], "next": [14, 25, 27, 47], "file": [14, 22, 24, 25, 26, 27, 36, 39, 47, 51], "format": [14, 23, 25, 27, 47], "ngff": [14, 25, 47], "platform": [14, 17, 22, 25, 32, 46, 47, 48, 50, 52], "plugin": [14, 16, 17, 19, 25, 42, 44, 47, 48, 52], "openmicroscopyenviron": [14, 25, 47], "sreeniva": [14, 19, 36, 39, 48], "bnsreenu": [14, 19, 36, 39, 48], "python_for_microscopist": [14, 19, 36, 39, 48], "arhnhk07t3q": [14, 25], "plycntv": [14, 25], "ubvujf7wausq5q7v7pi1vepi1": [14, 25], "elixir": [14, 18, 32, 36, 50], "europ": [14, 18, 32, 36, 50], "all_training_resourc": [14, 32, 50], "zeissmicroscopi": [14, 19, 39, 44, 48], "zen_python_oad_workshop": [14, 19, 39, 44, 48], "von": [14, 19, 28, 34], "chamier": [14, 19, 34], "f": [14, 17, 18, 19, 20, 32, 34, 46, 47, 48, 50], "lain": [14, 19, 34], "jukkala": [14, 19, 34], "spahn": [14, 19, 34], "krentzel": [14, 19, 34], "elia": [14, 19, 34], "nehm": [14, 19, 34], "martina": [14, 19, 34], "lerch": [14, 19, 34], "sara": [14, 19, 34], "hern\u00e1ndez": [14, 19, 34], "p\u00e9rez": [14, 19, 34], "pieta": [14, 19, 34], "mattila": [14, 19, 34], "eleni": [14, 19, 34], "ahmet": [14, 19, 34], "solak": [14, 19, 34], "alexand": [14, 19, 34], "krull": [14, 19, 34], "alain": [14, 19, 34], "leterri": [14, 19, 34], "yoav": [14, 19, 34], "shechtman": [14, 19, 34], "mike": [14, 19, 34], "heilemann": [14, 19, 34], "s41467": [14, 19, 34], "22518": [14, 19, 34], "plrc9dt9lezh_svrc4g5moovghuvjpwmv0": [14, 25, 29, 39], "searchabl": [14, 29], "light": [14, 29], "electron": [14, 29], "learn": [15, 17, 25, 29, 52], "scienc": 15, "cortez": [16, 32, 50], "katrin": [16, 32, 50], "singl": [16, 32, 50], "most": [16, 32, 50], "level": [16, 32, 50], "3490058": [16, 32, 50], "regeringen": [16, 50], "se": [16, 22, 39, 45, 50], "contentasset": [16, 50], "55e7d8fbf6df4a54ac56942b98d94e4f": [16, 50], "pa": [16, 50], "engelska": [16, 50], "guid": [16, 19, 22, 25, 27, 30, 46], "example_facility_manag": [16, 47], "fuster": [17, 36, 38, 52], "barcel\u00f3": [17, 36, 38, 52], "eurobioimag": [17, 20, 36, 38, 52], "franco": [17, 48, 52], "barranco": [17, 48, 52], "open": [17, 40, 42, 46, 52], "sourc": [17, 23, 25, 33, 40, 41, 42, 44, 46, 47, 48, 52], "librari": [17, 19, 32, 44, 48, 52], "build": [17, 48, 52], "call": [17, 48, 52], "nanguag": [17, 40, 48, 52], "jeremi": [17, 20, 36, 38, 40, 48, 52], "metz": [17, 20, 36, 38, 40, 48, 52], "russel": [17, 40, 48, 52], "design": [17, 22, 32, 40, 48, 52], "flexibl": [17, 40, 48, 52], "deploy": [17, 32, 40, 48, 52], "execut": [17, 40, 48, 52], "model": [17, 20, 23, 33, 40, 41, 52], "api": [17, 40, 48, 52], "rpc": [17, 40, 48, 52], "framework": [17, 42, 52], "high": [17, 48, 52], "scale": [17, 48, 52], "prepar": [17, 22, 25, 32, 46, 47, 48, 50, 52], "interact": [17, 23, 24, 41, 44, 52], "analyt": [17, 19, 40, 48, 52], "web": [17, 52], "intens": [17, 22, 25, 32, 46, 47, 50, 52], "usegalaxi": [17, 52], "ruman": [17, 20, 42, 52], "gerst": [17, 20, 42, 52], "zolt\u00e1n": [17, 20, 42, 52], "cseresny\u00e9": [17, 20, 42, 52], "marc": [17, 20, 42, 52], "thilo": [17, 20, 42, 52], "figg": [17, 20, 42, 52], "program": [17, 20, 52], "languag": [17, 20, 42, 52], "easi": [17, 20, 42, 52], "develop": [17, 22, 24, 41, 42, 50, 52], "01744": [17, 20, 42, 52], "hki": [17, 20, 42, 52], "jena": [17, 20, 42, 52], "how_to": [17, 32, 48], "conda_forge_packag": [17, 32, 48], "birgit": [17, 20, 42, 52], "m\u00f6ller": [17, 20, 42, 52], "marku": [17, 20, 42, 52], "gla\u00df": [17, 20, 42, 52], "danni": [17, 20, 42, 52], "misiak": [17, 20, 42, 52], "stefan": [17, 20, 42, 52], "posch": [17, 20, 42, 52], "microscop": [17, 20, 42, 52], "algorithm": [17, 20, 39, 42, 52], "openresearchsoftwar": [17, 20, 42, 52], "metajnl": [17, 20, 42, 52], "5334": [17, 20, 42, 52], "jor": [17, 20, 42, 52], "103": [17, 20, 42, 52], "informatik": [17, 20, 42, 52], "hall": [17, 20, 42, 52], "cross": [17, 19, 20, 39, 42, 52], "jordan": [17, 20, 22, 32, 42, 52], "fisher": [17, 20, 42, 52], "mark": [17, 19, 20, 39, 42, 43, 48, 52], "jepson": [17, 20, 42, 52], "modular": [17, 20, 42, 52], "13227": [17, 20, 42, 52], "mianalysi": [17, 20, 42, 52], "moham": [17, 18, 20, 32, 46, 47, 48, 50], "m": [17, 18, 20, 32, 43, 46, 47, 48, 50], "abdrabb": [17, 18, 20, 32, 46, 47, 48, 50], "mehrnaz": [17, 18, 20, 32, 46, 47, 48, 50], "babaki": [17, 18, 20, 32, 46, 47, 48, 50], "michel": [17, 18, 20, 22, 25, 32, 43, 46, 47, 48, 50], "bortolomeazzi": [17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "eik": [17, 18, 20, 32, 46, 47, 48, 50], "dahm": [17, 18, 20, 32, 46, 47, 48, 50], "vanessa": [17, 18, 20, 32, 46, 47, 48, 50], "fuch": [17, 18, 20, 32, 46, 47, 48, 50], "hoevel": [17, 18, 20, 32, 46, 47, 48, 50], "niraj": [17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "kandpal": [17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "m\u00f6hl": [17, 18, 20, 32, 46, 47, 48, 50], "joshua": [17, 18, 20, 32, 46, 47, 48, 50], "astrid": [17, 18, 20, 32, 46, 47, 48, 50], "schauss": [17, 18, 20, 32, 46, 47, 48, 50], "andrea": [17, 18, 20, 32, 46, 47, 48, 50], "schrader": [17, 18, 20, 32, 46, 47, 48, 50], "torsten": [17, 18, 20, 32, 46, 47, 48, 50], "st\u00f6ter": [17, 18, 20, 32, 46, 47, 48, 50], "th\u00f6nni\u00dfen": [17, 18, 20, 32, 46, 47, 48, 50], "monica": [17, 18, 20, 32, 46, 47, 48, 50], "valencia": [17, 18, 20, 32, 46, 47, 48, 50], "luka": [17, 18, 20, 32, 46, 47, 48, 50], "weil": [17, 18, 20, 32, 46, 47, 48, 50], "jen": [17, 18, 19, 20, 29, 32, 39, 46, 47, 48, 50], "wendt": [17, 18, 20, 29, 32, 46, 47, 48, 50], "zenti": [17, 18, 20, 22, 25, 32, 46, 47, 48, 50], "arc": [17, 18, 20, 32, 46, 47, 48, 50], "datapl": [17, 18, 20, 32, 46, 47, 48, 50], "enabl": [17, 22, 32, 52], "scalabl": [17, 48], "stabl": [17, 36, 47, 48, 52], "system": [17, 22, 25, 32, 46, 47, 48, 50, 52], "creat": [17, 24, 25, 27, 46, 47, 48, 50, 51, 52], "analys": [17, 48, 52], "academ": [17, 20, 48, 52], "oup": [17, 20, 48, 52], "28": [17, 37, 48, 52], "19": [17, 48, 52], "2520": [17, 48, 52], "290322": [17, 48, 52], "info": [18, 39], "offic": [18, 39], "bia23": [18, 39], "ts": [18, 19, 32, 39, 48], "track": [18, 19, 32], "witz": [19, 22, 30, 31, 34, 36, 38, 39, 45, 48], "cardona": [19, 39, 42], "syn": [19, 39, 42], "mrc": [19, 39, 42], "lmb": [19, 39, 42], "cam": [19, 39, 42], "acardona": [19, 39, 42], "dresden": [19, 28, 37, 40, 44, 48], "transloc": [19, 30, 39], "pixel": [19, 30], "classif": [19, 30, 39, 40, 48], "qualiti": [19, 30], "herearii": [19, 36, 38, 39], "metuarea": [19, 36, 38, 39], "valentin": [19, 36, 38, 39], "gilet": [19, 36, 38, 39], "hereariim": [19, 36, 38, 39], "agpl": [19, 38, 48], "tpecot": [19, 38, 48], "deeplearningbasedsegmentationforbiologist": [19, 38, 48], "victor": [19, 34, 38, 48], "yurchenko": [19, 34, 38, 48], "fedor": [19, 34, 38, 48], "ratnikov": [19, 34, 38, 48], "viktoriia": [19, 34, 38, 48], "checkalina": [19, 34, 38, 48], "yandexdataschool": [19, 34, 38, 48], "deep_vision_and_graph": [19, 34, 38, 48], "nunez": [19, 30, 39, 48], "iglesia": [19, 30, 39, 48], "jni": [19, 30, 39, 48], "halfwai": [19, 30, 39, 48], "skimag": [19, 30, 39, 48], "aurelien": [19, 39], "barbotin": [19, 39], "cha": [19, 39], "ola": [19, 39], "alexandra": [19, 39], "tarkowska": [19, 39], "mikolaj": [19, 39], "kundegorski": [19, 39], "todd": [19, 39], "fallesen": [19, 39], "daim": [19, 39], "scipi": [19, 30, 39, 48], "costantin": [19, 40, 48], "consist": [19, 40, 48], "show": [19, 34, 39, 40, 47, 48], "applic": [19, 25, 32, 40, 46, 47, 48, 50], "problem": [19, 40, 48], "micro": [19, 40, 48], "aleksej": [19, 36, 48], "zelezniak": [19, 36, 48], "neubias_academy_biapi": [19, 31, 39, 45, 48], "jenkinson": [19, 39, 48], "rittscher": [19, 39, 48], "univers": [19, 22, 25, 46, 47, 50], "oxford": [19, 39, 48], "dtc": [19, 39, 48], "dwaith": [19, 39, 48], "onbi_image_analysi": [19, 39, 48], "stephan": [19, 32, 48], "rigaud": [19, 32, 48], "brian": [19, 32, 48], "northan": [19, 32, 48], "till": [19, 32, 48], "korten": [19, 32, 48], "neringa": [19, 32, 48], "jurenait": [19, 32, 48], "apurv": [19, 32, 48], "deepak": [19, 32, 48], "kulkarni": [19, 32, 48], "steinbach": [19, 32, 48], "stark": [19, 32, 48], "marvin": [19, 32, 48], "host": [19, 32, 48], "symposium": [19, 22, 32, 46, 48, 50], "clesperanto": [19, 32, 48], "quantit": [19, 32, 48], "cshl": [19, 32, 48], "bethac07": [19, 32, 48], "qi_2024_analysis_lab_manu": [19, 32, 48], "we": [19, 22, 25, 26, 27, 34, 37, 39, 44, 46, 47, 48], "explor": [19, 32, 37, 44, 48], "them": [19, 23, 27, 32, 33, 40, 41, 44, 48], "viewer": [19, 32, 44, 48], "done": [19, 32, 44, 48], "pyclesperanto": [19, 32, 44, 48], "apoc": [19, 32, 44, 48], "conveni": [19, 32, 44, 48], "altern": [19, 32, 44, 48], "especi": [19, 32, 44, 48], "assist": [19, 32, 44, 48], "flim": [19, 32, 44, 48], "phasor": [19, 32, 44, 48], "plotter": [19, 32, 44, 48], "qm_course_bio_image_analysis_with_napari_202": [19, 32, 44, 48], "ellen": [20, 30, 39], "dobson": [20, 30, 39], "1017": [20, 30, 39], "s2633903x21000039": [20, 30, 39], "ciminilab": [20, 30, 39], "2021_jamali_biologicalimag": [20, 30, 39], "ellenberg": [20, 50], "barlow": [20, 50], "charl": [20, 50], "cook": [20, 50], "ardan": [20, 50], "patwardhan": [20, 50], "alvi": [20, 50], "brazma": [20, 50], "ewan": [20, 50], "birnei": [20, 50], "018": [20, 50], "0195": [20, 50], "8": [20, 28, 29, 43, 50], "beatriz": [20, 22, 36, 38, 39, 50, 52], "serrano": [20, 22, 36, 38, 39, 50, 52], "solano": [20, 22, 36, 38, 39, 50, 52], "bioeng": [20, 36, 38, 52], "run": [20, 23, 27, 36, 44, 52], "zoo": [20, 23, 33, 40, 41, 52], "ai4lif": 20, "announc": [20, 36, 38, 52], "stefania": [20, 30, 39], "marcotti": [20, 30, 39], "carl": [20, 30, 39], "barri": [20, 30, 39], "slater": [20, 30, 39], "543701v1": [20, 30, 39], "coba": [20, 30], "nih": [20, 30, 39], "2023_imageanalysissurvei": [20, 30, 39], "antj": [20, 50], "keppler": [20, 50], "arina": [20, 50], "rybina": [20, 50], "bu\u011fra": [20, 50], "\u00f6zdemir": [20, 50], "ayoub": [20, 50], "el": [20, 50], "ghadraoui": [20, 50], "eriksson": [20, 50], "link": [20, 26, 27, 37], "springer": [20, 50], "1007": [20, 50], "s00418": [20, 50], "02203": [20, 50], "7": [20, 28, 50], "2010": [20, 43], "rupress": [20, 43], "jcb": [20, 43], "189": [20, 43], "5": [20, 43], "777": [20, 43], "35828": [20, 43], "joel": [20, 43], "rigano": [20, 43], "itano": [20, 43], "lisa": [20, 43], "cameron": [20, 43], "guillermo": [20, 43], "marqu\u00e9": [20, 43], "sander": [20, 43], "clair": [20, 43], "brown": [20, 43], "01290": [20, 43], "alessandro": [20, 43], "01315": [20, 43], "ub": [20, 46, 50], "heidelberg": [20, 34, 39, 46, 47, 48, 50], "volltextserv": [20, 46, 50], "29489": [20, 46, 50], "zobel": [20, 22, 25, 29, 32, 46, 47, 50], "sarah": [20, 29, 46, 47, 50], "weischner": [20, 29, 46, 47, 50], "case": [20, 22, 25, 27, 29, 32, 46, 47, 50], "exampl": [20, 27, 29, 34, 39, 46, 48, 50], "m\u00fcnster": [20, 29, 46, 47, 50], "network": [20, 29, 46, 47, 50], "0004000267": [20, 29, 46, 47, 50], "dan": 20, "chitwood": 20, "sourabh": 20, "paland": 20, "plcell": 20, "34": 20, "e1": 20, "6628764": 20, "plantsandpython": 20, "00_opening_pag": 20, "glyn": [20, 32], "quareo": [20, 32], "13041": [20, 32], "01166": [20, 29, 43, 50], "work": [20, 27, 29], "annika": [20, 39], "reink": [20, 39], "detail": [20, 27, 39], "arxiv": [20, 39], "2302": [20, 39], "01790v3": [20, 39], "bastien": [22, 39, 45], "volker": [22, 24, 36, 39, 45], "baecker": [22, 39, 45], "pavi": [22, 39, 45], "roccod": [22, 39, 45], "defragmentation_trainingschool_eosc": [22, 39, 45], "life_2022": [22, 39, 45], "cornelia": [22, 32, 46, 50], "wetzker": [22, 32, 46, 50], "short": [22, 32, 46, 50], "technolog": [22, 23, 32, 33, 40, 41, 46, 50], "10083555": [22, 32, 46, 50], "esgomezm": [22, 36, 38, 39], "neubias_chapter_dl_2020": [22, 36, 38, 39], "cellprofiler_introduct": [22, 36, 39, 45], "kari": [22, 32], "kamvar": [22, 32], "zhian": [22, 32], "carpentri": [22, 32], "attende": [22, 32], "through": 22, "three": [22, 32], "stage": [22, 32], "backward": [22, 32], "lesson": [22, 32], "leav": [22, 32], "have": [22, 23, 26, 27, 32, 37], "identifi": [22, 32], "aim": [22, 32, 37], "form": [22, 32], "assess": 22, "mechan": [22, 32], "receiv": [22, 32], "feedback": [22, 32, 37], "4317149": [22, 32], "fortmann": [22, 25, 32, 46, 47, 50], "grote": [22, 25, 32, 46, 47, 50], "carsten": [22, 25, 32, 46, 47, 50], "om": [22, 25], "remot": [22, 25, 32, 46, 47, 50], "allow": [22, 25, 32, 37, 46, 47, 50], "store": [22, 25, 26, 32, 46, 47, 50], "organ": [22, 25, 32, 46, 47, 50], "annot": [22, 25, 32, 46], "microscopi": [22, 37, 41, 44], "becom": [22, 25, 32, 46, 47, 50], "one": [22, 25, 32, 46, 47, 50], "known": [22, 25, 32, 46, 47, 50], "infrastructur": [22, 25, 32, 36, 38, 47, 52], "facilit": [22, 25, 32, 46, 47], "uptak": [22, 25, 32, 46, 47, 50], "rdm": [22, 25, 32, 46, 47, 50], "institut": [22, 25, 46, 47], "sinc": [22, 25, 32, 46, 47, 50, 52], "adopt": [22, 25, 32, 46, 47, 50], "daili": [22, 25, 32, 46, 47, 50], "routin": [22, 25, 32, 46, 47, 50], "requir": [22, 25, 32, 46, 47, 50], "portfolio": [22, 25, 32, 46, 47, 50], "asset": [22, 25, 36, 38, 46, 47, 50], "On": [22, 25, 32, 46, 47, 50], "top": [22, 25, 32, 46, 47, 50], "environ": [22, 46, 50], "consortium": [22, 25, 32, 46, 47, 50], "staff": [22, 25, 32, 46, 47, 50], "often": [22, 25, 32, 37, 46, 47, 50], "addit": [22, 25, 32, 46, 47, 50], "own": [22, 25, 32, 46, 47], "instanc": [22, 25, 32, 34, 39, 46, 47, 48, 50], "experi": [22, 25, 32, 46, 47, 50], "gather": [22, 25, 32, 46, 47, 50], "group": [22, 25, 32, 46, 47, 50], "rdm4mic": [22, 46], "set": [22, 32, 47, 48], "deck": [22, 25, 32, 46, 47, 50], "serv": [22, 25, 27, 32, 46, 47, 50], "basi": [22, 25, 28, 32, 46, 47, 50], "self": [22, 25, 32, 46, 47, 50], "instruct": [22, 25, 32, 37, 46, 47, 50], "manual": [22, 25, 46, 47, 50], "direct": [22, 25, 32, 46, 47, 50], "beginn": [22, 25, 32, 46, 47, 50], "educ": [22, 25, 27, 32, 46, 47, 50], "complement": [22, 25, 32, 46, 47, 50], "exist": [22, 25, 32, 37, 46, 47, 50], "contribut": [22, 25, 32, 46, 47, 50], "8323588": [22, 25, 32, 46, 47, 50], "youtub": [22, 29, 32, 46, 50], "list": [22, 25, 26, 27, 29, 32, 37, 39, 44, 46, 47, 48], "pl2k": [22, 25, 32, 46, 47, 50], "zwpor7shjg1hhdiwlzj0mb_stlu": [22, 25, 32, 46, 47, 50], "1henpidtpht3bc1y26altitahj2c5xcol": [22, 36], "p1": [22, 36], "bj\u00f6rn": [22, 36, 39], "gr\u00fcning": [22, 36, 39], "1wg_4307xmksgfwt3taxmvx2rzig1k0sm1e7saenjqki": [22, 36, 39], "script": 22, "raw": [22, 34, 36, 38, 39, 47, 48], "githubusercont": [22, 36, 38, 39], "spaom2018": [22, 36, 38, 39], "machinelearning_spaomworkshop_publ": [22, 36, 38, 39], "1ojoy9ghmuusmuwckps_injf_wzazmllunvk1fueb4pa": [22, 36, 38, 39, 45], "ge3a24e733b_0_54": [22, 36, 38, 39, 45], "floden": [22, 32, 52], "di": [22, 28, 32, 52], "tommaso": [22, 32, 52], "paolo": [22, 32, 52], "priorit": [22, 32, 52], "portabl": [22, 32, 52], "seamlessli": [22, 32, 52], "genom": [22, 32, 52], "hpc": [22, 32, 52], "cluster": [22, 28, 32, 37, 52], "major": [22, 32, 52], "back": [22, 32, 52], "fast": [22, 32, 52], "grow": [22, 32, 52], "ecosystem": [22, 32, 52], "made": [22, 32, 52], "up": [22, 32], "across": [22, 32, 52], "academia": [22, 32, 52], "govern": [22, 32, 52], "industri": [22, 32, 52], "count": [22, 32, 52], "1m": [22, 32, 52], "download": [22, 32, 52], "10k": [22, 32, 52], "worldwid": [22, 32, 52], "4334697": [22, 32, 52], "czi": [22, 32, 39], "decemb": [22, 32, 39], "4328911": [22, 32, 39], "della": [22, 32, 50], "chiesa": [22, 32, 50], "stefano": [22, 32, 50], "6602101": [22, 32, 50], "31": [22, 32, 46, 50], "given": [22, 32, 36, 39, 46, 50], "pol": [22, 46, 50], "8329306": [22, 32, 46, 50], "zidas2020_intro_dl": [22, 36, 38, 39], "4330625": [22, 32, 38, 39], "challeng": [23, 33, 41, 48], "workshop": [23, 24, 41, 47], "11474407": [23, 24, 39, 41, 50], "dataset": [23, 40, 47, 50], "11109616": [23, 47, 50], "furthermor": [23, 33, 40, 41], "deploi": [23, 33, 40, 41], "deepimagej": [23, 33, 40, 41], "easili": [23, 33, 40, 41], "evalu": [23, 33, 40, 41], "zerocostdl4m": [23, 33, 40, 41], "deepbac": [23, 33, 40, 41], "ensur": [23, 33, 40, 41], "dl4miceverywher": [23, 33, 40, 41], "manner": [23, 33, 40, 41], "147": [23, 33, 40, 41], "galaxyproject": [23, 24, 34], "sobolewski": [23, 44], "jax": [23, 44], "spring": [23, 44], "thejacksonlaboratori": [23, 44], "section": [23, 44], "cours": [23, 29, 33, 40, 47], "i": [23, 32], "introducemi": [23, 32], "person": [23, 32], "audienc": [23, 32], "10679054": [23, 32], "hugger": [24, 36, 38], "qin": [24, 36, 38], "holgerhennig": [24, 36, 39], "automat": [24, 27, 37, 50, 51], "integr": [24, 50, 51], "share": [24, 40], "cite": [24, 50, 51], "coderefineri": [24, 50, 51], "without": [24, 50, 51], "command": [24, 50, 51], "line": [24, 50, 51], "hilsenstein": [24, 36], "volkerh": [24, 36], "jupyt": [24, 32, 37, 44], "ad": [24, 27, 37, 50, 51], "ture": [24, 50, 51], "2020aprilgitcours": [24, 36], "rafael": [24, 34, 39, 48], "camacho": [24, 34, 39, 48], "camachodejai": [24, 34, 39, 48], "oh3vki7era": 25, "object": [25, 32, 46, 47, 50], "core": [25, 47], "simpl": [26, 34, 39, 47, 48], "These": 26, "structur": 26, "like": [26, 27, 37], "name": [26, 28], "websit": 26, "url": 26, "entri": [26, 27], "multipl": 26, "properti": 26, "mandatori": 26, "descript": 26, "titl": 26, "must": 26, "internet": [26, 28], "etc": 26, "could": [26, 37], "more": 26, "option": 26, "recommend": 26, "publication_d": 26, "extens": [26, 27], "just": [26, 27], "let": [26, 27], "know": [26, 27], "issu": [26, 27, 37], "kind": [26, 37], "you": [26, 27, 37], "would": [26, 27], "add": [26, 27], "here": [26, 27], "pull": 27, "request": 27, "find": [27, 37], "bottom": 27, "page": [27, 37], "If": 27, "too": 27, "busi": 27, "enter": [27, 37], "everyth": 27, "yourself": 27, "pleas": 27, "includ": 27, "take": 27, "your": [27, 37], "favorit": [27, 37], "individu": 27, "howev": 27, "think": 27, "particlar": 27, "valuabl": 27, "feel": 27, "free": 27, "now": 27, "relev": 27, "particular": 27, "limit": 27, "imag": [27, 37], "variou": 27, "onli": 27, "except": 27, "locat": 27, "behind": 27, "paywal": 27, "advertis": 27, "commerci": 27, "product": 27, "remov": 27, "modifi": 27, "ani": [27, 37], "point": 27, "time": [27, 37], "got": 27, "yml": 27, "click": 27, "button": 27, "modif": 27, "veri": [27, 37], "end": 27, "save": 27, "meaning": 27, "commit": 27, "messag": 27, "submit": 27, "why": 27, "after": 27, "wait": 27, "second": 27, "while": 27, "test": 27, "until": 27, "pass": 27, "don": 27, "check": 27, "error": 27, "branch": 27, "again": 27, "care": 27, "substanti": 27, "send": 27, "dr": 28, "rer": 28, "medic": 28, "dfg": [28, 37], "excel": [28, 37], "physic": [28, 37], "life": [28, 37], "arnoldstrass": 28, "18": 28, "01307": 28, "telefon": 28, "49": 28, "351": 28, "463": 28, "40315": 28, "mail": 28, "die": 28, "unser": 28, "seiten": 28, "wurden": 28, "gr\u00f6\u00dfter": 28, "sorgfalt": 28, "erstellt": 28, "richtigkeit": 28, "vollst\u00e4ndigkeit": 28, "und": 28, "aktualit\u00e4t": 28, "der": 28, "k\u00f6nnen": 28, "wir": 28, "jedoch": 28, "kein": 28, "gew\u00e4hr": 28, "\u00fcbernehmen": 28, "diensteanbiet": 28, "sind": 28, "eigen": 28, "auf": 28, "diesen": 28, "allgemeinen": 28, "gesetzen": 28, "bi": 28, "nicht": 28, "verpflichtet": 28, "\u00fcbermittelt": 28, "oder": 28, "gespeichert": 28, "fremd": 28, "informationen": 28, "zu": 28, "\u00fcberwachen": 28, "umst\u00e4nden": 28, "forschen": 28, "ein": 28, "rechtswidrig": 28, "t\u00e4tigkeit": 28, "hinweisen": 28, "verpflichtungen": 28, "zur": 28, "entfernung": 28, "sperrung": 28, "nutzung": 28, "bleiben": 28, "hiervon": 28, "unber\u00fchrt": 28, "diesbez\u00fcglich": 28, "ist": 28, "erst": 28, "dem": 28, "zeitpunkt": 28, "kenntni": 28, "einer": 28, "konkreten": 28, "rechtsverletzung": 28, "m\u00f6glich": 28, "bei": 28, "bekanntwerden": 28, "entsprechenden": 28, "rechtsverletzungen": 28, "werden": 28, "dies": 28, "umgehend": 28, "entfernen": 28, "angebot": 28, "enth\u00e4lt": 28, "externen": 28, "webseiten": 28, "dritter": 28, "deren": 28, "keinen": 28, "einfluss": 28, "haben": 28, "deshalb": 28, "fremden": 28, "auch": 28, "verlinkten": 28, "stet": 28, "jeweilig": 28, "anbiet": 28, "betreib": 28, "zum": 28, "verlinkung": 28, "rechtsverst\u00f6\u00df": 28, "\u00fcberpr\u00fcft": 28, "waren": 28, "erkennbar": 28, "permanent": 28, "inhaltlich": 28, "kontrol": 28, "ohn": 28, "konkret": 28, "anhaltspunkt": 28, "zumutbar": 28, "derartig": 28, "durch": 28, "seitenbetreib": 28, "erstellten": 28, "werk": 28, "unterliegen": 28, "deutschen": 28, "vervielf\u00e4ltigung": 28, "bearbeitung": 28, "verbreitung": 28, "jede": 28, "verwertung": 28, "au\u00dferhalb": 28, "grenzen": 28, "gestattet": 28, "unter": 28, "einhaltung": 28, "lizenzbedingungen": 28, "lizenz": 28, "soweit": 28, "dieser": 28, "seit": 28, "vom": 28, "beachtet": 28, "insbesonder": 28, "solch": 28, "gekennzeichnet": 28, "sollten": 28, "sie": 28, "trotzdem": 28, "urheberrechtsverletzung": 28, "aufmerksam": 28, "bitten": 28, "um": 28, "einen": 28, "hinwei": 28, "webseit": 28, "regel": 28, "angab": 28, "personenbezogen": 28, "daten": 28, "unseren": 28, "beispielsweis": 28, "anschrift": 28, "email": 28, "adressen": 28, "erhoben": 28, "erfolgt": 28, "freiwillig": 28, "ihr": 28, "ausdr\u00fccklich": 28, "zustimmung": 28, "dritt": 28, "weitergegeben": 28, "weisen": 28, "darauf": 28, "hin": 28, "dass": 28, "daten\u00fcbertragung": 28, "im": 28, "kommunik": 28, "per": 28, "sicherheitsl\u00fccken": 28, "aufweisen": 28, "kann": 28, "l\u00fcckenlos": 28, "schutz": 28, "vor": 28, "zugriff": 28, "rahmen": 28, "impressumspflicht": 28, "ver\u00f6ffentlichten": 28, "kontaktdaten": 28, "\u00fcbersendung": 28, "angefordert": 28, "werbung": 28, "informationsmaterialien": 28, "wird": 28, "hiermit": 28, "widersprochen": 28, "behalten": 28, "sich": 28, "rechtlich": 28, "schritt": 28, "fall": 28, "unverlangten": 28, "zusendung": 28, "werbeinformationen": 28, "etwa": 28, "spam": 28, "2020": [29, 52], "edx": [29, 39], "ecol": [29, 39], "polytechniqu": [29, 39], "federal": [29, 39], "lausann": [29, 39], "databas": [29, 37], "microscopist": 29, "segment": [30, 32, 34, 40, 47], "i2k": 30, "mpi": [31, 45], "cbg": [31, 45], "lectur": [31, 40, 45, 46, 47, 50], "appli": [32, 48], "dask": 32, "visual": [32, 44], "numpi": 34, "riccardo": [34, 39, 47, 48], "massei": [34, 39, 47, 48], "13th": [34, 39, 47, 48], "modul": [34, 39, 47, 48], "45": [34, 39, 47, 48], "pm": [34, 39, 47, 48], "main": [34, 39, 47, 48], "goal": [34, 39, 47, 48], "workflow": [34, 40, 48], "jn": [34, 39, 47, 48], "connect": [34, 39, 47, 48], "nuclei": [34, 47], "rmassei": [34, 39, 47, 48], "anirban": [36, 39], "rai": [36, 39], "dl4mia": [36, 39], "seminar": [36, 39], "1ppvuumi5w2ojw_sabzsqvaxuuiktq7ma": [36, 39], "256": 37, "been": 37, "updat": 37, "preliminari": 37, "experiment": 37, "search": 37, "look": 37, "follow": 37, "releas": 37, "earli": 37, "prototyp": 37, "inject": 37, "findabl": 37, "interoper": 37, "bar": 37, "left": 37, "term": 37, "make": 37, "sure": 37, "correspond": 37, "unless": 37, "mention": 37, "otherwis": 37, "fund": 37, "deutsch": 37, "forschungsgemeinschaft": 37, "foundat": 37, "nation": 37, "infrasstructur": 37, "nfdi": 37, "46": 37, "501864659": 37, "support": 37, "strategi": 37, "exc2068": 37, "dtl": [39, 50], "nl": [39, 50], "byod": [39, 50], "comput": 40, "pytorch": 40, "archiv": 46, "forum": 47, "sc": 47, "87925": 47, "gerbi": 50, "joachim": 51, "goedhart": 51, "561479v1": 51, "cloud": 52, "local": 52}, "objects": {}, "objtypes": {}, "objnames": {}, "titleterms": {"christian": 0, "tischer": 0, "11": [0, 5], "A": [0, 4, 9, 10, 11, 12, 14, 17, 19, 20, 30, 31, 32, 39, 42, 46, 50, 51, 52], "hitchhik": [0, 9, 20, 32, 39], "s": [0, 9, 14, 20, 22, 24, 25, 31, 32, 36, 38, 39, 46, 47, 50], "guid": [0, 9, 10, 11, 12, 14, 20, 23, 24, 31, 32, 34, 39, 41, 47, 50, 51], "through": [0, 9, 20, 23, 32, 39], "bio": [0, 9, 11, 14, 18, 19, 20, 22, 23, 25, 32, 33, 36, 38, 39, 40, 41, 44, 46, 47, 48, 50, 51], "imag": [0, 1, 2, 3, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 17, 18, 19, 20, 22, 23, 24, 25, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 50, 51, 52], "analysi": [0, 1, 5, 7, 9, 11, 12, 14, 17, 18, 19, 20, 22, 23, 24, 25, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 44, 45, 46, 47, 48, 50, 51, 52], "softwar": [0, 9, 20, 22, 24, 32, 39, 43, 45, 50, 51], "univers": [0, 4, 9, 20, 32, 39, 48], "high": [0, 5, 14, 15, 36], "throughput": [0, 5, 14, 15, 36], "microscopi": [0, 5, 7, 9, 11, 14, 15, 19, 20, 23, 25, 29, 32, 33, 34, 36, 39, 40, 43, 46, 47, 48, 50], "data": [0, 1, 4, 5, 7, 9, 10, 11, 12, 13, 14, 15, 16, 19, 20, 22, 23, 24, 25, 29, 32, 33, 34, 36, 39, 40, 41, 43, 44, 45, 46, 47, 48, 50, 51], "bigdataprocessor2": [0, 20, 32, 39, 50], "free": [0, 14, 19, 20, 32, 34, 39, 50], "open": [0, 4, 9, 11, 12, 14, 19, 20, 22, 23, 25, 29, 32, 33, 34, 39, 41, 44, 45, 47, 48, 50], "sourc": [0, 9, 14, 19, 20, 22, 24, 32, 34, 36, 39, 45, 50], "fiji": [0, 9, 14, 19, 20, 24, 25, 29, 32, 34, 39, 42, 50], "plugin": [0, 20, 32, 39, 50], "inspect": [0, 20, 32, 39, 50], "process": [0, 2, 3, 5, 9, 12, 13, 17, 19, 20, 22, 29, 31, 32, 34, 36, 39, 42, 48, 50, 52], "tb": [0, 20, 32, 39, 50], "size": [0, 20, 32, 39, 50], "cellprofil": [0, 19, 22, 24, 30, 36, 39, 45], "practic": [0, 7, 10, 12, 18, 19, 20, 23, 24, 32, 36, 38, 39, 41, 45, 48, 50, 51], "neubia": [0, 2, 5, 7, 9, 13, 14, 19, 20, 22, 24, 25, 31, 32, 36, 38, 39, 45, 48], "lisbon": [0, 24, 36, 39, 45], "2017": [0, 2, 5, 22, 24, 36, 39, 45], "commun": [0, 4, 5, 10, 11, 14, 20, 22, 25, 29, 30, 32, 36, 39, 43, 46, 50, 51], "develop": [0, 5, 9, 14, 19, 20, 29, 32, 34, 39, 45], "checklist": [0, 5, 20, 29, 39], "publish": [0, 5, 20, 29, 39], "analys": [0, 5, 20, 22, 29, 32, 39], "cours": [0, 1, 2, 3, 5, 7, 12, 14, 18, 19, 22, 24, 25, 30, 32, 34, 36, 38, 39, 44, 45, 48, 51], "materi": [0, 1, 2, 7, 9, 13, 14, 19, 22, 23, 24, 25, 32, 34, 36, 37, 38, 39, 46, 47, 48, 50, 51], "method": [0, 18, 20, 22, 23, 25, 32, 39, 43], "bioimag": [0, 1, 2, 3, 4, 5, 7, 9, 10, 12, 13, 14, 15, 17, 18, 19, 20, 22, 23, 24, 25, 29, 30, 31, 32, 33, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 48, 50, 52], "om": [0, 1, 4, 14, 17, 18, 20, 24, 32, 36, 46, 47, 50], "ngff": [0, 1, 4, 20, 32, 46, 50], "next": [0, 1, 4, 20, 32, 46, 50], "gener": [0, 1, 4, 9, 20, 22, 32, 38, 39, 43, 46, 48, 50], "file": [0, 1, 4, 20, 32, 46, 50], "format": [0, 1, 4, 5, 9, 20, 26, 32, 43, 46, 50], "expand": [0, 1, 4, 20, 32, 46, 50], "access": [0, 1, 4, 10, 20, 32, 43, 46, 50], "strategi": [0, 1, 4, 20, 32, 46, 50], "zarr": [0, 1, 24, 36], "i2k": [0, 1, 7, 19, 36, 38, 39, 48], "2020": [0, 1, 2, 4, 5, 7, 9, 13, 14, 19, 20, 22, 25, 30, 32, 36, 38, 39, 42, 43, 45, 48], "s3": [0, 1, 36], "workshop": [0, 1, 3, 13, 14, 19, 22, 32, 36, 39, 44, 46, 48, 50], "constantin": 1, "pape": 1, "6": [1, 6, 10, 30, 33, 40, 41, 43], "collect": [1, 14, 20, 34, 38, 39, 43], "teach": [1, 14, 23, 24, 32, 34, 36, 38, 39, 48], "deep": [1, 3, 7, 11, 14, 19, 22, 23, 32, 33, 34, 36, 38, 39, 40, 41, 45, 48], "learn": [1, 3, 7, 9, 11, 14, 19, 22, 23, 24, 32, 33, 34, 36, 38, 39, 40, 41, 44, 45, 48], "biomed": [1, 34, 38, 39], "dl": [1, 19, 22, 36, 38, 39], "mbl": [1, 19, 22, 36, 38, 39], "2021": [1, 4, 7, 19, 20, 22, 32, 36, 38, 39, 46, 48, 50], "exercis": [1, 7, 19, 22, 36, 38, 39, 48], "embl": [1, 2, 7, 13, 19, 24, 36, 38, 48], "22": [1, 7, 19, 36, 38, 48], "train": [1, 5, 9, 12, 14, 17, 18, 19, 20, 22, 23, 24, 25, 32, 33, 34, 36, 37, 38, 39, 41, 45, 46, 47, 48, 50, 52], "model": [1, 2, 9, 14, 19, 22, 32, 36, 38, 39, 48], "vision": [1, 19, 34, 36, 38, 39, 48], "compact": [1, 36, 38, 39], "et": 2, "al": 2, "7": [2, 4, 18, 51], "dl4miceverywher": [2, 14, 19, 32], "python": [2, 3, 6, 9, 11, 12, 13, 14, 17, 19, 20, 24, 30, 31, 32, 34, 36, 39, 44, 45, 47, 48, 52], "code": [2, 13, 19, 20, 36, 39, 48], "club": [2, 13, 19, 36, 48], "mini": [2, 13, 19, 36, 48], "tutori": [2, 7, 13, 14, 19, 24, 25, 27, 29, 30, 34, 36, 38, 39, 42, 48], "applic": [2, 22, 36, 38, 39], "io": [2, 36], "analyst": [2, 5, 9, 13, 19, 20, 22, 24, 32, 36, 39, 45], "school": [2, 5, 9, 13, 18, 19, 20, 22, 32, 36, 39, 45, 48], "2019": [2, 5, 7, 9, 13, 19, 22, 36, 38, 39, 45, 48], "guillaum": 3, "witz": 3, "8": [3, 7, 15], "2022": [3, 7, 19, 36, 38, 39, 48], "mic": [3, 19, 36, 39, 48], "us": [3, 9, 11, 19, 22, 24, 32, 34, 36, 37, 38, 39, 47, 48, 51], "pytorch": [3, 19, 36, 38, 39, 48], "dask": [3, 19, 36, 39, 48], "fundament": [3, 19, 30, 36, 39, 48], "digit": [3, 12, 19, 36, 39], "beginn": [3, 19, 31, 39, 48], "jupyt": [3, 19, 22, 25, 31, 34, 36, 39, 45, 47, 48], "interact": [3, 4, 10, 19, 20, 22, 31, 32, 36, 38, 39, 43, 45, 46, 48, 50], "cloud": [3, 4, 10, 20, 22, 23, 32, 36, 38, 39, 45, 46, 50], "comput": [3, 7, 9, 19, 20, 22, 32, 36, 38, 39, 42, 44, 45, 48], "numpi": [3, 19, 30, 48], "panda": [3, 19, 30, 48], "josh": 4, "moor": 4, "optim": [4, 10, 20, 32, 46, 50], "storag": [4, 10, 20, 32, 46, 50], "larg": [4, 9, 10, 11, 20, 22, 32, 46, 48, 50], "arrai": [4, 10, 20, 32, 46, 50], "edam": [4, 5, 9, 20, 32, 43], "The": [4, 5, 9, 12, 14, 20, 25, 29, 32, 34, 39, 42, 43], "ontolog": [4, 5, 9, 20, 32, 43], "informat": [4, 5, 9, 14, 20, 32, 39, 43], "oper": [4, 5, 9, 20, 32, 43], "topic": [4, 5, 9, 20, 32, 43], "updat": [4, 5, 9, 20, 29, 32, 42, 43], "nfdi4bioimag": [4, 10, 17, 18, 20, 32, 37, 46, 47, 48, 50], "perspect": [4, 10, 20, 32, 46], "nation": [4, 10, 20, 32, 46, 50], "standard": [4, 10, 12, 20, 32, 46], "research": [4, 9, 10, 11, 12, 14, 16, 20, 22, 24, 29, 32, 34, 39, 41, 46, 47, 50, 51], "manag": [4, 9, 10, 11, 12, 14, 16, 19, 20, 22, 24, 29, 32, 36, 38, 39, 41, 43, 46, 47, 48, 50], "survei": [4, 20, 30, 32, 39, 46, 50], "spatialdata": [4, 20, 32, 48], "an": [4, 5, 6, 11, 14, 20, 22, 25, 32, 36, 39, 43, 44, 45, 46, 48, 50], "framework": [4, 20, 32, 48], "spatial": [4, 20, 32, 48], "omic": [4, 20, 32, 48], "n4bi": [4, 23, 32, 50], "ahm": [4, 23, 32, 50], "welcom": [4, 23, 32, 50], "town": [4, 23, 32, 50], "kota": 5, "miura": 5, "basic": [5, 12, 29, 39], "eubia": [5, 12, 24, 36, 39, 45], "2013": [5, 12, 24, 36, 39, 45], "intens": [5, 12, 24, 36, 39, 45], "dynam": [5, 12, 24, 36, 39, 45], "peripheri": [5, 12, 24, 36, 39, 45], "nucleu": [5, 12, 24, 36, 39, 45], "highlight": [5, 9, 20, 32, 39, 45], "from": [5, 9, 20, 22, 23, 32, 39, 45, 51], "2016": [5, 9, 20, 32, 39, 45], "success": [5, 9, 20, 32, 39, 45], "stori": [5, 9, 20, 32, 39, 45], "kei": [5, 9, 20, 32, 39, 45], "asset": [5, 9, 20, 32, 39, 45], "life": [5, 9, 14, 20, 25, 29, 32, 39, 45], "scientist": [5, 9, 20, 29, 32, 39, 45], "what": [5, 22, 27, 36, 39, 45], "introduct": [5, 7, 9, 12, 13, 19, 22, 32, 36, 38, 39, 40, 42, 45, 48], "mara": 6, "lampert": 6, "annot": [6, 10, 11, 14, 15, 20, 23, 29, 39, 43, 44, 47, 48, 50], "3d": [6, 9, 11, 14, 15, 22, 31, 36, 39, 42, 44, 45, 48], "napari": [6, 11, 14, 19, 23, 24, 30, 32, 36, 38, 39, 44, 48], "featur": [6, 11, 39, 44, 48], "extract": [6, 11, 39, 44, 48], "get": [6, 11, 25, 32, 48], "start": [6, 11, 16, 25, 32, 48, 50], "mambaforg": [6, 11, 32, 48], "qualiti": [6, 11, 20, 32, 39, 44, 48], "assur": [6, 11, 39, 44, 48], "segment": [6, 7, 11, 19, 22, 36, 38, 39, 44, 45, 48], "result": [6, 9, 11, 20, 39, 42, 44, 48], "rescal": [6, 11, 39, 44, 48], "pixel": [6, 9, 11, 22, 31, 39, 42, 44, 45, 48], "isotropi": [6, 11, 39, 44, 48], "track": [6, 9, 11, 14, 15, 22, 31, 36, 39, 42, 44, 45, 48], "martin": 7, "weigert": 7, "care": [7, 19, 36, 38, 39, 48], "stardist": [7, 19, 22, 36, 38, 39, 45, 48], "embo": [7, 18, 19, 36, 38, 39, 48], "optic": [7, 19, 36, 38, 39, 48], "biologi": [7, 9, 11, 12, 19, 20, 29, 32, 36, 38, 39, 43, 44, 48, 50, 51], "csbdeep": [7, 19, 36, 38, 39, 48], "2023": [7, 17, 18, 19, 20, 32, 36, 38, 46, 47, 48, 50], "machin": [7, 9, 19, 22, 23, 24, 32, 33, 36, 38, 39, 40, 44, 45, 48], "archiv": [7, 14, 15, 20, 23, 33, 39, 40, 48, 50], "academi": [7, 19, 22, 31, 36, 38, 39, 45, 48], "nuclei": [7, 19, 22, 36, 38, 39, 45, 48], "robert": 9, "haas": 9, "36": 9, "studi": [9, 13, 20, 36, 39, 42, 45], "long": [9, 20, 42], "term": [9, 20, 42], "reproduc": [9, 12, 20, 22, 32, 34, 42, 52], "imagej": [9, 13, 14, 17, 20, 22, 24, 25, 34, 36, 39, 42, 45, 52], "help": [9, 22, 32, 48], "languag": [9, 22, 32, 48], "scienc": [9, 12, 14, 19, 20, 23, 29, 32, 33, 39, 40, 41, 48, 50], "biostatist": [9, 19, 32, 39, 44, 48], "program": [9, 14, 19, 22, 32, 36, 39, 42, 44, 48], "brows": [9, 11, 32, 47, 48], "resourc": [9, 11, 12, 14, 15, 17, 20, 32, 36, 37, 38, 39, 45, 47, 48, 50, 52], "clij": [9, 20, 29, 39, 42], "gpu": [9, 18, 19, 20, 22, 29, 32, 39, 42, 48], "acceler": [9, 18, 19, 20, 22, 29, 32, 39, 42, 48], "everyon": [9, 20, 29, 39, 42], "challeng": [9, 14, 15, 20, 22, 32, 36, 39, 45, 46, 50], "opportun": [9, 20, 22, 32, 39, 45, 46, 50], "core": [9, 10, 14, 20, 22, 32, 39, 46, 48, 50], "facil": [9, 10, 11, 14, 16, 20, 22, 25, 32, 36, 39, 42, 46, 47, 50], "collabor": [9, 11, 20, 32, 39, 50, 51], "script": [9, 11, 19, 32, 38, 39, 42, 48, 50, 51], "edit": [9, 11, 12, 32, 50, 51], "git": [9, 11, 23, 24, 32, 33, 36, 41, 50, 51], "cultiv": [9, 23, 32, 33, 41, 50], "advanc": [9, 14, 18, 23, 25, 33, 39, 41, 50], "datenmanag": [9, 23, 33, 50], "artifici": [9, 22, 32, 38, 39, 48], "intellig": [9, 22, 32, 38, 39, 48], "If": [9, 11, 32, 50], "you": [9, 11, 32, 50], "licens": [9, 11, 22, 23, 32, 33, 37, 41, 50, 51], "ll": [9, 11, 32, 50], "harder": [9, 11, 32, 50], "steal": [9, 11, 32, 50], "why": [9, 11, 32, 50, 51], "we": [9, 11, 32, 50], "should": [9, 11, 32, 50], "our": [9, 11, 32, 50], "work": [9, 11, 22, 31, 32, 39, 42, 45, 50], "imagej2": [9, 22, 31, 39, 42, 45], "api": [9, 22, 31, 39, 42, 45], "beat": [9, 22, 31, 39, 42, 45], "macro": [9, 13, 22, 36, 39, 42, 45], "scientif": [9, 11, 12, 22, 32, 36, 39, 42, 48, 52], "mpi": [9, 22, 36, 39, 42], "cbg": [9, 22, 36, 39, 42], "dresden": [9, 22, 32, 36, 39, 42, 46, 50], "kollabor": [9, 23, 33, 41, 50], "arbeiten": [9, 23, 33, 41, 50], "und": [9, 23, 33, 41, 50], "versionskontrol": [9, 23, 33, 41, 50], "mit": [9, 23, 33, 34, 41, 50], "lectur": [9, 14, 19, 22, 25, 32, 39, 42, 44, 48], "appli": [9, 22, 39, 42], "environ": [9, 11, 14, 25, 32, 47, 48], "conda": [9, 11, 17, 32, 48], "mamba": [9, 11, 32, 48], "friend": [9, 11, 19, 30, 32, 39, 48], "meet": [9, 20, 32, 39], "middl": [9, 20, 32, 39], "toward": [9, 20, 22, 32, 36, 39], "multidisciplinari": [9, 20, 32, 39], "multi": [9, 22, 25, 31, 32, 39, 42, 45, 46, 47, 50], "view": [9, 22, 31, 39, 42, 45], "fusion": [9, 22, 31, 39, 42, 45], "share": [9, 11, 22, 23, 32, 33, 41, 50, 51], "quo": [9, 20, 29], "vadi": [9, 20, 29], "parallel": [9, 22, 32], "heterogen": [9, 22, 32], "pure": [9, 22, 32], "cpu": [9, 22, 32], "zenodo": [9, 11, 32, 50, 51], "theori": [9, 22, 31, 39, 42, 45], "trackmat": [9, 22, 31, 39, 42, 45], "mastodon": [9, 22, 31, 39, 42, 45], "object": [9, 17, 20, 22, 31, 39, 42, 45, 52], "2d": [9, 14, 15, 22, 31, 36, 39, 42, 45], "susann": 10, "kuni": 10, "mdemic": [10, 20, 29, 43, 50], "metadata": [10, 14, 20, 23, 25, 29, 32, 43, 46, 47, 50], "tool": [10, 14, 19, 20, 29, 32, 36, 38, 39, 43, 47, 50], "facilit": [10, 20, 29, 43, 50], "fair": [10, 14, 20, 22, 23, 24, 25, 29, 36, 39, 41, 43, 47, 50], "set": [10, 13, 14, 15, 20, 24, 25, 36, 39, 46, 50], "up": [10, 17, 20, 24, 36, 38, 46, 50, 52], "infrastructur": [10, 20, 46, 50], "structur": [10, 23, 25, 32, 46, 47, 50], "concept": [10, 12, 25, 32, 46, 50], "technic": [10, 25, 32, 46, 50], "solut": [10, 25, 32, 46, 50], "context": [10, 25, 32, 46, 50], "link": [10, 14, 25, 28, 32, 36, 46, 50], "blog": 11, "15": [11, 12], "handl": [11, 23, 47, 50], "scale": [11, 22, 32, 46, 50], "electron": [11, 50], "promot": [11, 50], "nikon": [11, 50], "center": [11, 14, 25, 39, 50], "cell": [11, 12, 14, 15, 36, 39, 50, 51], "run": [11, 32, 38, 39, 48], "bia": [11, 32, 38, 39, 48], "pol": [11, 18, 19, 32, 38, 39, 48], "omero": [11, 14, 16, 17, 20, 22, 23, 25, 29, 32, 34, 36, 38, 39, 46, 47, 48, 50], "server": [11, 32, 38, 39, 48], "your": [11, 17, 24, 32, 39, 48, 50, 51], "poster": [11, 50, 51], "figshar": [11, 50, 51], "how": [11, 14, 25, 27, 37, 50, 51], "To": [11, 50, 51], "book": 12, "notebook": [12, 19, 31, 34, 39, 47, 48], "deepprofil": [12, 36, 38, 39], "handbook": [12, 19, 32, 36, 38, 39, 44, 45, 48, 50], "base": [12, 19, 20, 38, 39, 43, 48], "profil": [12, 39], "intern": [12, 32], "align": [12, 32], "extend": [12, 32], "visual": [12, 14, 15, 17, 19, 20, 30, 39, 42, 48, 52], "matplotlib": [12, 48], "super": 12, "resolut": 12, "primer": 12, "ture": [12, 34], "wai": [12, 34], "trainer": [12, 32, 50], "10": 13, "carpentri": [13, 24, 34], "biologist": [13, 14, 19, 20, 24, 31, 34, 38, 48], "2018": [13, 19, 22, 36, 39, 45], "nextflow": [13, 14, 17, 22, 32, 36, 48, 52], "demo": [13, 36], "pipelin": [13, 17, 34, 36, 39, 47, 48, 52], "scripts_filopodyanr": [13, 36, 39, 45], "case": [13, 36, 39, 45], "ts7": [13, 36, 39, 45], "szege": [13, 36, 39, 45], "quantix": [13, 39], "thedigitalcel": [13, 39], "first": [13, 39], "complet": [13, 39], "52": 14, "plan": [14, 20, 24, 31, 39, 41, 50], "perform": [14, 20, 31], "quantit": [14, 20, 31], "experi": [14, 20, 30, 31, 39], "valid": [14, 15, 20, 39], "databas": [14, 18, 32, 39, 47, 50], "ai": [14, 15, 39, 40], "galleri": [14, 15, 39, 40], "volum": [14, 15, 39], "em": [14, 15, 39], "index": [14, 39], "zoo": [14, 36, 38, 39], "coba": [14, 25, 39], "youtub": [14, 25, 36, 39, 44, 45, 47, 48], "channel": [14, 25, 36, 39, 44, 45, 47, 48], "czi": 14, "dataset": [14, 15, 36, 39], "celltrackcolab": [14, 19, 34], "chri": [14, 25, 36, 39, 44, 48], "halvin": [14, 25, 36, 39, 44, 48], "digitalsreeni": [14, 25, 48], "euro": [14, 22, 23, 24, 25, 36, 39, 41, 50], "templat": [14, 24, 39, 41, 50], "Is": [14, 25, 39], "just": [14, 25, 39], "forschungsdaten": [14, 32, 50], "info": [14, 50], "org": [14, 32, 50], "gerbi": [14, 36], "list": [14, 36, 50], "global": [14, 18, 25, 39], "i3d": [14, 22, 25, 32, 36, 46, 47, 50], "onlin": [14, 36, 50], "ibiolog": [14, 25, 39], "cycl": [14, 25, 39], "imari": [14, 25, 29, 39], "melbourn": [14, 25, 39], "microscopydb": [14, 29], "event": [14, 18, 47, 50], "deploy": [14, 47], "exampl": [14, 16, 47], "microscopist": [14, 19, 36, 39, 48], "rdm4mic": [14, 25, 32, 36, 47, 50], "present": [14, 32, 50], "rdmbite": [14, 25], "rdmkit": [14, 32, 50], "tess": [14, 18, 36], "zen": [14, 19, 39, 44, 48], "zerocostdl4m": [14, 19, 34], "exploit": [14, 19, 34], "googl": [14, 19, 34], "colab": [14, 19, 25, 34], "toolbox": [14, 17, 19, 20, 34, 42, 52], "arivi": [14, 25, 29, 39], "vision4d": [14, 25, 29, 39], "microlist": [14, 29], "document": [16, 17, 32, 36, 39, 40, 47, 48, 52], "5": [16, 28], "effici": [16, 32, 50], "institut": [16, 32, 50], "lund": [16, 50], "declar": [16, 50], "maximis": [16, 50], "benefit": [16, 50], "morpholibj": [16, 39], "walkthrough": [16, 47], "14": [17, 29], "ai4lif": [17, 36, 38, 52], "team": [17, 36, 38, 52], "galaxi": [17, 22, 23, 24, 34, 36, 38, 39, 52], "network": [17, 19, 36, 38, 48, 52], "gtn": [17, 36, 38, 52], "enhanc": [17, 36, 38, 52], "biapi": [17, 48, 52], "bioengin": [17, 20, 36, 38, 40, 48, 52], "fractal": [17, 48, 52], "jipip": [17, 20, 42, 52], "batch": [17, 20, 42, 52], "make": [17, 24, 32, 48, 50, 51], "packag": [17, 32, 48], "avail": [17, 32, 48], "forg": [17, 32, 48], "mitobo": [17, 20, 42, 52], "modularimageanalysi": [17, 20, 42, 52], "mia": [17, 20, 42, 52], "assembl": [17, 20, 42, 52], "modularisedimag": [17, 20, 42, 52], "workflow": [17, 20, 22, 24, 32, 36, 38, 39, 42, 45, 47, 52], "ta3": [17, 18, 20, 32, 46, 47, 48, 50], "hackathon": [17, 18, 20, 32, 46, 47, 48, 50], "uoc": [17, 18, 20, 32, 46, 47, 48, 50], "cologn": [17, 18, 20, 32, 46, 47, 48, 50], "snakemak": [17, 48, 52], "earli": [18, 19, 39, 48], "career": [18, 19, 39, 48], "47": 19, "project": [19, 24, 36, 38, 39, 50, 51], "For": [19, 38, 48], "graphic": [19, 34, 38, 48], "scikit": [19, 30, 39, 48], "iafig": [19, 39], "rm": [19, 39], "metabol": [19, 36, 48], "cobrapi": [19, 36, 48], "home": [19, 31, 39, 45, 48], "onbi": [19, 39, 48], "qi": [19, 32, 48], "2024": [19, 32, 44, 48], "lab": [19, 24, 32, 36, 38, 48], "manual": [19, 32, 48], "qm": [19, 32, 44, 48], "public": [20, 50], "40": 20, "need": [20, 30, 39], "futur": [20, 30, 39], "call": [20, 50], "biolog": [20, 29, 43, 50], "bridg": [20, 30, 39], "user": [20, 22, 25, 30, 32, 39, 46, 47, 50], "build": [20, 22, 36, 38, 39, 50], "ecosystem": [20, 50], "matter": [20, 43], "real": [20, 43], "world": [20, 43], "methodsj2": [20, 43], "captur": [20, 43], "comprehens": [20, 43], "text": [20, 43], "micro": [20, 43], "meta": [20, 43], "app": [20, 43], "specif": [20, 43], "initi": [20, 32, 46, 50], "plant": 20, "seri": 20, "lesson": 20, "bioinformat": 20, "quarep": [20, 32], "limi": [20, 32], "driven": [20, 32], "establish": [20, 32], "guidelin": [20, 32], "assess": [20, 32], "instrument": [20, 32], "light": [20, 32], "rembi": [20, 29, 43, 50], "recommend": [20, 29, 43, 50], "enabl": [20, 29, 43, 50], "reus": [20, 29, 43, 50], "understand": [20, 39], "metric": [20, 39], "relat": [20, 39], "pitfal": [20, 39], "slide": [22, 23, 25, 32, 44, 46, 47, 50], "39": 22, "ad": [22, 39, 45], "biaflow": [22, 39, 45], "strudel": [22, 32, 46, 50], "tu": [22, 32, 46, 50], "creat": [22, 32], "curricula": [22, 32], "re": [22, 25, 32, 46, 47, 50, 51], "usabl": [22, 25, 32, 46, 47, 50], "adjust": [22, 25, 32, 46, 47, 50], "purpos": [22, 25, 32, 46, 47, 50], "local": [22, 25, 32, 46, 47, 50], "servic": [22, 36], "effort": [22, 36], "scalabl": [22, 32, 52], "qupath": [22, 32, 39], "awkward": [22, 32, 39], "seminar": [22, 32, 50], "think": [22, 32, 46, 50], "differ": [22, 32, 46, 50], "zida": [22, 36, 38, 39], "ilastik": [22, 32, 38, 39], "13": [23, 34, 46], "task": [23, 24, 39, 41, 50], "fairi": [23, 33, 40, 41], "intro": [23, 44], "my": [23, 32], "journei": [23, 32], "classroom": [23, 32], "16": [24, 42, 47], "kreshuk": [24, 36, 38], "eipp": [24, 36, 38], "predoc": [24, 36, 38], "flow": [24, 36, 39], "cytometri": [24, 36, 39], "ifc": [24, 36, 39], "citabl": [24, 50, 51], "remot": [24, 36], "desktop": [24, 36], "browser": [24, 36], "citat": [24, 50, 51], "cff": [24, 50, 51], "control": [24, 36], "github": [24, 36], "video": 25, "20": 25, "yml": 26, "contribut": [27, 37], "quick": 27, "short": 27, "cut": 27, "inclus": 27, "criteria": 27, "exclus": 27, "mainten": 27, "step": 27, "imprint": 28, "impressum": 28, "angaben": 28, "gem\u00e4\u00df": 28, "tmg": 28, "kontakt": 28, "verantwortlich": 28, "f\u00fcr": 28, "den": 28, "inhalt": 28, "nach": 28, "55": 28, "ab": 28, "2": 28, "rstv": 28, "haftungsausschluss": 28, "haftung": 28, "urheberrecht": 28, "datenschutz": 28, "all": 29, "right": 29, "reserv": 29, "epflx": [29, 39], "bsd": [30, 31], "3": [30, 31], "claus": [30, 31], "9": 31, "cc": [32, 33], "4": [32, 33], "0": [32, 33], "58": 32, "hc": [34, 39, 47, 48], "unknown": 36, "59": 36, "diffus": [36, 39], "restor": [36, 39], "thi": 37, "acknowledg": 37, "26": [38, 45], "111": 39, "bring": [39, 50], "own": [39, 50], "principl": 41, "12": [44, 52], "friendli": 47, "61": 48, "50": 50, "studentsourc": 51, "aggreg": 51, "engin": 52}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 6, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.intersphinx": 1, "sphinx": 56}})
\ No newline at end of file
diff --git a/tags/artificial_intelligence.html b/tags/artificial_intelligence.html
index 46390b4..1713f6c 100644
--- a/tags/artificial_intelligence.html
+++ b/tags/artificial_intelligence.html
@@ -1618,7 +1618,7 @@ <h2>ilastik: interactive machine learning for (bio)image analysis<a class="heade
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/bioimage_analysis.html b/tags/bioimage_analysis.html
index c838ad4..a49148c 100644
--- a/tags/bioimage_analysis.html
+++ b/tags/bioimage_analysis.html
@@ -3219,7 +3219,7 @@ <h2>quantixed/TheDigitalCell: First complete code set<a class="headerlink" href=
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/deep_learning.html b/tags/deep_learning.html
index 4a393ea..006e746 100644
--- a/tags/deep_learning.html
+++ b/tags/deep_learning.html
@@ -1244,7 +1244,7 @@ <h2>Microscopy data analysis: machine learning and the BioImage Archive<a class=
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/fair-principles.html b/tags/fair-principles.html
index ceb64f0..2432a8e 100644
--- a/tags/fair-principles.html
+++ b/tags/fair-principles.html
@@ -1246,7 +1246,7 @@ <h2>Open Science, Sharing &amp; Licensing<a class="headerlink" href="#open-scien
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/imagej.html b/tags/imagej.html
index b004ee4..0c9acd3 100644
--- a/tags/imagej.html
+++ b/tags/imagej.html
@@ -1436,7 +1436,7 @@ <h2>Working with pixels<a class="headerlink" href="#working-with-pixels" title="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/meta_data.html b/tags/meta_data.html
index 422e2c3..4ae27bb 100644
--- a/tags/meta_data.html
+++ b/tags/meta_data.html
@@ -1238,7 +1238,7 @@ <h2>REMBI: Recommended Metadata for Biological Images—enabling reuse of micros
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/napari.html b/tags/napari.html
index bb424da..8ec6e81 100644
--- a/tags/napari.html
+++ b/tags/napari.html
@@ -1350,7 +1350,7 @@ <h2>ZEN &amp; Python workshop<a class="headerlink" href="#zen-python-workshop" t
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/neubias.html b/tags/neubias.html
index 4350274..1e280c0 100644
--- a/tags/neubias.html
+++ b/tags/neubias.html
@@ -1622,7 +1622,7 @@ <h2>Working with pixels<a class="headerlink" href="#working-with-pixels" title="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/nfdi4bioimage.html b/tags/nfdi4bioimage.html
index 8bc6dca..220361d 100644
--- a/tags/nfdi4bioimage.html
+++ b/tags/nfdi4bioimage.html
@@ -1382,7 +1382,7 @@ <h2>Thinking data management on different scales<a class="headerlink" href="#thi
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/omero.html b/tags/omero.html
index 77fb561..6df193d 100644
--- a/tags/omero.html
+++ b/tags/omero.html
@@ -1423,7 +1423,7 @@ <h2>User friendly Image metadata annotation tool/workflow for OMERO<a class="hea
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/python.html b/tags/python.html
index 382d2e4..a879db5 100644
--- a/tags/python.html
+++ b/tags/python.html
@@ -2284,7 +2284,7 @@ <h2>numpy pandas course<a class="headerlink" href="#numpy-pandas-course" title="
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/readme.html b/tags/readme.html
index 37f62f5..b46aee7 100644
--- a/tags/readme.html
+++ b/tags/readme.html
@@ -1107,7 +1107,7 @@ <h2> Contents </h2>
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/research_data_management.html b/tags/research_data_management.html
index 9fe272d..cd57271 100644
--- a/tags/research_data_management.html
+++ b/tags/research_data_management.html
@@ -2079,7 +2079,7 @@ <h2>[N4BI AHM] Welcome to BioImage Town<a class="headerlink" href="#n4bi-ahm-wel
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/sharing.html b/tags/sharing.html
index 0c14fde..733bc94 100644
--- a/tags/sharing.html
+++ b/tags/sharing.html
@@ -1258,7 +1258,7 @@ <h2>Studentsourcing - aggregating and re-using data from a practical cell biolog
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>
   
diff --git a/tags/workflow_engine.html b/tags/workflow_engine.html
index badde27..0e736e4 100644
--- a/tags/workflow_engine.html
+++ b/tags/workflow_engine.html
@@ -1359,7 +1359,7 @@ <h2>Snakemake Documentation<a class="headerlink" href="#snakemake-documentation"
   
   <div class="footer-item">
     <p class="last-updated">
-Last updated on 2024-06-19.<br>
+Last updated on 2024-06-28.<br>
 </p>
   </div>