{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":685455262,"defaultBranch":"master","name":"biomero-scripts","ownerLogin":"NL-BioImaging","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-08-31T09:11:18.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/123726338?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1722354558.0","currentOid":""},"activityList":{"items":[{"before":"95579d58241e2060c4fef42ff1481c3c74486666","after":"18678ef19b54832989d4792b1d8155faf4d35dfc","ref":"refs/heads/database","pushedAt":"2024-08-08T08:23:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Add a job progress view","shortMessageHtmlLink":"Add a job progress view"}},{"before":"08d79d0666605676e7f2ac1fb31327dd4d7de9e0","after":"95579d58241e2060c4fef42ff1481c3c74486666","ref":"refs/heads/database","pushedAt":"2024-08-06T14:11:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"add debug log","shortMessageHtmlLink":"add debug log"}},{"before":"ee1e64f29a2ef22d336a8765aa1d750cb151b5d7","after":"08d79d0666605676e7f2ac1fb31327dd4d7de9e0","ref":"refs/heads/database","pushedAt":"2024-07-31T12:42:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Track full workflows","shortMessageHtmlLink":"Track full workflows"}},{"before":null,"after":"ee1e64f29a2ef22d336a8765aa1d750cb151b5d7","ref":"refs/heads/database","pushedAt":"2024-07-30T15:49:18.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Start adding eventsourcing to the postresql db","shortMessageHtmlLink":"Start adding eventsourcing to the postresql db"}},{"before":"2c2c7218538c4ebd7de95fc8058f9e224b5f3151","after":"e40913938b8c0fe889b8be0090a879b1e562e564","ref":"refs/heads/master","pushedAt":"2024-07-24T08:45:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Bump to 1.14.0","shortMessageHtmlLink":"Bump to 1.14.0"}},{"before":"5f8423a4257675960c4ab96c3ff2eb148b1714b3","after":"2c2c7218538c4ebd7de95fc8058f9e224b5f3151","ref":"refs/heads/master","pushedAt":"2024-07-23T15:59:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Make all input names unique to allow duplicate wf parameters","shortMessageHtmlLink":"Make all input names unique to allow duplicate wf parameters"}},{"before":"1b19e31bba943c52c5b6cc5e51c1f17bd31f4868","after":"5f8423a4257675960c4ab96c3ff2eb148b1714b3","ref":"refs/heads/master","pushedAt":"2024-07-17T14:40:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Bump to BIOMERO version 1.13.0","shortMessageHtmlLink":"Bump to BIOMERO version 1.13.0"}},{"before":"0d276553718cfe664df48ced617b53fab5c906b5","after":"1b19e31bba943c52c5b6cc5e51c1f17bd31f4868","ref":"refs/heads/master","pushedAt":"2024-07-17T12:43:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Also show converter versions available.","shortMessageHtmlLink":"Also show converter versions available."}},{"before":"51e6cdf6d04641ed16de46c6b1d56ae0613eb8cd","after":"0d276553718cfe664df48ced617b53fab5c906b5","ref":"refs/heads/master","pushedAt":"2024-07-17T12:27:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Handle remote conversion better","shortMessageHtmlLink":"Handle remote conversion better"}},{"before":"a3feeb81d33dd10e6597e80b0f9d1a57f788023a","after":"51e6cdf6d04641ed16de46c6b1d56ae0613eb8cd","ref":"refs/heads/master","pushedAt":"2024-05-30T15:39:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Add some comments on how to read csv into OMERO. Mainly, you need a # header line","shortMessageHtmlLink":"Add some comments on how to read csv into OMERO. Mainly, you need a #…"}},{"before":"e56deceafc276f279158f0282906f4b66d3891ad","after":"a3feeb81d33dd10e6597e80b0f9d1a57f788023a","ref":"refs/heads/master","pushedAt":"2024-05-29T13:41:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Bump to v1.12.0","shortMessageHtmlLink":"Bump to v1.12.0"}},{"before":"e56deceafc276f279158f0282906f4b66d3891ad","after":null,"ref":"refs/tags/v1.12.0","pushedAt":"2024-05-29T13:40:23.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"}},{"before":"442766a9224ec708537ebd3def038b3abb250f8e","after":"e56deceafc276f279158f0282906f4b66d3891ad","ref":"refs/heads/master","pushedAt":"2024-05-29T13:34:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Also print BIOMERO version used","shortMessageHtmlLink":"Also print BIOMERO version used"}},{"before":"91447de2f70d9d9db29f9d95d768c02eec54dd34","after":"442766a9224ec708537ebd3def038b3abb250f8e","ref":"refs/heads/master","pushedAt":"2024-05-23T16:20:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Bump to 1.11.0","shortMessageHtmlLink":"Bump to 1.11.0"}},{"before":"a98c6a439a790270ca3a29033c40b68b8fb14803","after":"91447de2f70d9d9db29f9d95d768c02eec54dd34","ref":"refs/heads/master","pushedAt":"2024-05-23T16:15:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Update scripts: handle csv errors and add wf descriptions","shortMessageHtmlLink":"Update scripts: handle csv errors and add wf descriptions"}},{"before":"c8241d6553f263714fb61ce83b849505592aafb4","after":"a98c6a439a790270ca3a29033c40b68b8fb14803","ref":"refs/heads/master","pushedAt":"2024-05-22T14:42:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Bump to next release","shortMessageHtmlLink":"Bump to next release"}},{"before":"941b094139233baaf2e1a4d4896fba5b92119b2b","after":"c8241d6553f263714fb61ce83b849505592aafb4","ref":"refs/heads/master","pushedAt":"2024-05-22T13:44:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Check Setup: Also pull the sing.log","shortMessageHtmlLink":"Check Setup: Also pull the sing.log"}},{"before":"ec21fba9409d26fa1b01179400d897c088be2045","after":"941b094139233baaf2e1a4d4896fba5b92119b2b","ref":"refs/heads/master","pushedAt":"2024-05-15T14:39:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Move unzipping of data step to the image transfer script","shortMessageHtmlLink":"Move unzipping of data step to the image transfer script"}},{"before":"7ef5184819582f8413227d21fec46b0b36519160","after":"ec21fba9409d26fa1b01179400d897c088be2045","ref":"refs/heads/master","pushedAt":"2024-05-13T15:27:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Add a BIOMERO script for Remote ZARR to TIFF conversion","shortMessageHtmlLink":"Add a BIOMERO script for Remote ZARR to TIFF conversion"}},{"before":"44719e5722a3ec7ceb1199e8624b956ffc6deda3","after":"7ef5184819582f8413227d21fec46b0b36519160","ref":"refs/heads/master","pushedAt":"2024-05-08T14:54:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Handle spaces in filenames","shortMessageHtmlLink":"Handle spaces in filenames"}},{"before":"baa623b6d8c885f7e3257e52a0ac3816cd79472f","after":"44719e5722a3ec7ceb1199e8624b956ffc6deda3","ref":"refs/heads/master","pushedAt":"2024-05-08T12:34:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"More f-string issues. Cannot format w autopep8","shortMessageHtmlLink":"More f-string issues. Cannot format w autopep8"}},{"before":"24454f88c649378f5e30d124330b3276c26a587b","after":"baa623b6d8c885f7e3257e52a0ac3816cd79472f","ref":"refs/heads/master","pushedAt":"2024-05-08T12:24:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Fix language","shortMessageHtmlLink":"Fix language"}},{"before":"286af52326955cf9f018dd2efb0ff069a1409230","after":"24454f88c649378f5e30d124330b3276c26a587b","ref":"refs/heads/master","pushedAt":"2024-05-08T12:21:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Wrong handling of multiline fstrings","shortMessageHtmlLink":"Wrong handling of multiline fstrings"}},{"before":"5d8a4e3cfd1a59aad8bb2ce86b53748600306af0","after":"286af52326955cf9f018dd2efb0ff069a1409230","ref":"refs/heads/master","pushedAt":"2024-05-08T12:13:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"fix typo","shortMessageHtmlLink":"fix typo"}},{"before":"d1eb12cf8cf19a1e564d3544ddcc93e087a3efd6","after":"5d8a4e3cfd1a59aad8bb2ce86b53748600306af0","ref":"refs/heads/master","pushedAt":"2024-05-02T16:23:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Bump version, add contact and move a lot of constants to biomero. Rename image transfer var.","shortMessageHtmlLink":"Bump version, add contact and move a lot of constants to biomero. Ren…"}},{"before":null,"after":"d7478569429a6f3a409e896dc08b4d84e14a828c","ref":"refs/heads/api","pushedAt":"2024-05-01T15:36:55.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Start with API scripts that will return json like a fake REST API","shortMessageHtmlLink":"Start with API scripts that will return json like a fake REST API"}},{"before":"178698285c6ead66d3201123b5aadfadffe5298c","after":"d1eb12cf8cf19a1e564d3544ddcc93e087a3efd6","ref":"refs/heads/master","pushedAt":"2024-04-04T16:08:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Cleanup after conversion and also do not copy source image metadata. Dtype breaks masks.","shortMessageHtmlLink":"Cleanup after conversion and also do not copy source image metadata. …"}},{"before":"2803478df5a77665d5f39f522de5b43eff93518e","after":"178698285c6ead66d3201123b5aadfadffe5298c","ref":"refs/heads/master","pushedAt":"2024-04-04T13:15:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Move from print to logger in all scripts","shortMessageHtmlLink":"Move from print to logger in all scripts"}},{"before":"9af044210efe3856a6f6b3161e2f958002be4703","after":"2803478df5a77665d5f39f522de5b43eff93518e","ref":"refs/heads/master","pushedAt":"2024-04-04T09:22:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Single string logs","shortMessageHtmlLink":"Single string logs"}},{"before":"4fa9d08970c364441b17afcd8fd6a04edd705077","after":"9af044210efe3856a6f6b3161e2f958002be4703","ref":"refs/heads/master","pushedAt":"2024-04-04T09:17:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"TorecLuik","name":"Torec Luik","path":"/TorecLuik","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/68958516?s=80&v=4"},"commit":{"message":"Turn prints into logs","shortMessageHtmlLink":"Turn prints into logs"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAElP93XAA","startCursor":null,"endCursor":null}},"title":"Activity · NL-BioImaging/biomero-scripts"}