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Electron_Density_From_Simulation.dat
Form_Factor_From_Simulation.dat
Headgroup_Glycerol_Order_Parameters_Simulation.dat
README.md
area.dat
box.xvg
electronsCHOL.dat
electronsLIPID.dat
sn-1_Order_Parameters_Simulation.dat
sn-2_Order_Parameters_Simulation.dat

README.md

#!/bin/bash
#Model from http://doi.org/10.5281/zenodo.154346

wget https://zenodo.org/record/154346/files/chol40.tpr
wget https://zenodo.org/record/154346/files/chol40.xtc

mv chol40.xtc trajectory.xtc
mv chol40.tpr topol.tpr

cp ../../../../../../MATCH/MAPPING/mappingPOPCslipids.txt ./mappingFILE.txt
awk -f ../../../../../scripts/makeELECTRONSpopc.awk mappingFILE.txt > electronsLIPID.dat

cp ../../../../../../MATCH/MAPPING/mappingCHOLESTEROLslipid.txt ./mappingFILEchol.txt
awk -f ../../../../../scripts/makeELECTRONSchol.awk mappingFILEchol.txt > electronsCHOL.dat  

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