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#Original data from

wget wget wget

mv POPE_C36_310K.tpr topol.tpr mv POPE_C36_310K.gro conf.gro

echo System | gmx trjconv -f POPE_C36_310K.xtc -s topol.tpr -b 100000 -o traj.xtc cp ../../../../../scripts/orderParm_defs/order_parameter_definitions_MODEL_CHARMM36_POPE.def defFILE.def sh ../../../../../scripts/ mv OrdPars.dat OrdParsPOPE.dat

sh ~/NMRlipids/MATCH/scripts/ OrdParsPOPE.dat > Headgroup_Glycerol_Order_Parameters_Simulation.dat

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