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@NationalGenomicsInfrastructure

National Genomics Infrastructure

The Swedish National Genomics Infrastructure (NGI), a technology platform at SciLifeLab, serving primarily Swedish academia.

Pinned

  1. piper Public

    Forked from Molmed/piper

    A genomics pipeline build on top of the GATK Queue framework

    Scala 9 9

  2. Forked from mariogiov/ngi_pipeline

    Code driving the production pipeline at SciLifeLab

    Python 5 20

  3. charon Public

    Forked from pekrau/charon

    Database for IGN projects and samples, with RESTful interface. Built on top of Tornado and CouchDB.

    Python 3 8

  4. Ansible playbooks for provisioning NGI pipeline and related sw

    Jinja 1 18

Repositories

  • charon Public

    Database for IGN projects and samples, with RESTful interface. Built on top of Tornado and CouchDB.

    Python 3 MIT 10 4 1 Updated Jul 5, 2022
  • userman Public

    Simple user account handling system for use with web services. Built on top of Tornado and CouchDb.

    Python 0 MIT 3 0 0 Updated Jul 1, 2022
  • miarka-provision Public

    Ansible playbooks for provisioning NGI cluster Miarka

    Jinja 0 8 1 2 Updated Jun 30, 2022
  • ngi_pipeline Public

    Code driving the production pipeline at SciLifeLab

    Python 5 21 22 0 Updated Jun 30, 2022
  • DailyRead Public

    The NGI Daily Read

    HTML 0 1 0 0 Updated Jun 29, 2022
  • MultiQC_NGI Public

    MultiQC plugin for the National Genomics Infrastructure in Stockholm, Sweden.

    Python 0 MIT 7 0 0 Updated Jun 15, 2022
  • ngi_reports Public

    Code to generate reports for use by the NGI in SciLifeLab

    HTML 3 MIT 12 6 0 Updated Jun 15, 2022
  • Python 0 MIT 6 0 0 Updated Jun 15, 2022
  • ngisweden.se Public

    Wordpress theme and plugins for ngisweden.se

    PHP 0 MIT 9 3 0 Updated May 23, 2022
  • OrderPortal Public

    A portal for orders (requests, project applications, etc) to a facility from its users.

    Python 0 MIT 11 0 0 Updated May 19, 2022

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