diff --git a/.Rbuildignore b/.Rbuildignore index 18166aa..c89f29e 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -25,4 +25,6 @@ paper.* ^CRAN-SUBMISSION$ codemeta.json -^codemeta\.json$ \ No newline at end of file +^codemeta\.json$ + +CITATION.cff \ No newline at end of file diff --git a/DESCRIPTION b/DESCRIPTION index 6d810ab..5777bfa 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,6 +1,6 @@ Package: neotoma2 Title: Working with the Neotoma Paleoecology Database -Date: 2023-08-16 +Date: 2024-02-05 Version: 1.0.3 Authors@R: c(person(given = "Dominguez Vidana", diff --git a/R/collunits-methods.R b/R/collunits-methods.R index 596c34d..f917cba 100644 --- a/R/collunits-methods.R +++ b/R/collunits-methods.R @@ -128,6 +128,7 @@ setMethod(f = "show", #' @title Get or remove sites by numeric index #' @param x The collunits object #' @param i The numeric index +#' @description Retrieve sites by numeric index #' @return null used for side effects. Printing a data.frame setMethod(f = "[", signature = signature(x = "collunits", i = "numeric"), diff --git a/README.md b/README.md index 63e1614..7293c2e 100644 --- a/README.md +++ b/README.md @@ -3,7 +3,7 @@ [![NSF-1948926](https://img.shields.io/badge/NSF-1948926-blue.svg)](https://www.nsf.gov/awardsearch/showAward?AWD_ID=1948926) [![Codecov test coverage](https://codecov.io/gh/NeotomaDB/neotoma2/branch/production/graph/badge.svg)](https://app.codecov.io/gh/NeotomaDB/neotoma2?branch=production) [![DOI](https://zenodo.org/badge/265675258.svg)](https://zenodo.org/badge/latestdoi/265675258) -[![status](https://joss.theoj.org/papers/80636d1e6d32175f13edb7e7ed14089a/status.svg)](https://joss.theoj.org/papers/80636d1e6d32175f13edb7e7ed14089a) +[![status](https://joss.theoj.org/papers/80636d1e6d32175f13edb7e7ed14089a/status.svg)](https://joss.theoj.org/papers/10.21105/joss.05561) # `neotoma2` R Package diff --git a/cran-comments.md b/cran-comments.md index 68d541a..3ff9183 100644 --- a/cran-comments.md +++ b/cran-comments.md @@ -174,4 +174,12 @@ I hope this is correct now, otherwise, please give me some more references/examp ## Remarks for Upgrade 1.0.3 -Added JOSS Article PDF and fixed small errors in the API calls. \ No newline at end of file +Fixed errors in the API calls. + +Fixed filter function for collection units and datasets. + +Updated plotLeaflet to not add provider tiles. + +Removed mapview to avoid `sp` conflicts. + +Updated README to reflect milestones with JOSS. \ No newline at end of file