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NeuroMorph_Proximity_Analysis.py
README.md
proximity.png
proximity_after.png
proximity_before.png
synapse_and_vesicles.png

README.md

Full Documentation

NeuroMorph Proximity Analysis

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This module calculates the surface regions of two surfaces that are within a given distance of each other.





Also includes the Sphere to Surface Distances tool, which computes the closest distance from each vesicle sphere to a synapse mesh. Outputs list of distances from each vesicle.

Initially developed to provide analysis for the paper:

Barnes SJ, Cheetham CE, Liu Y, Bennett SH, Albieri G, Jorstad AA, Knott GW, Finnerty GT. (2015) "Delayed and Temporally Imprecise Neurotransmission in Reorganizing Cortical Microcircuits." The Journal of Neuroscience, 35(24): 9024-9037.

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