Python Other
nnadeau and bendichter fixed spelling (#585)
fixed spelling
Latest commit 631f6db Aug 13, 2018
Permalink
Failed to load latest commit information.
.circleci ci: Simplify release process directly uploading packages from CircleCI Jul 27, 2018
docs fixed spelling (#585) Aug 13, 2018
src/pynwb fixed spelling (#585) Aug 13, 2018
tests fixed spelling (#585) Aug 13, 2018
.codecov.yml Add codecov config file for better defaults Apr 28, 2018
.coveragerc Change coverage source file to include more files Jan 13, 2018
.gitattributes Add versioneer for dynamic versioning Oct 29, 2017
.gitignore Ignore files that are generated by tests Apr 25, 2018
.travis.yml Install tox on travis Aug 7, 2018
Legal.txt adding copyright May 4, 2017
MANIFEST.in Add versioneer for dynamic versioning Oct 29, 2017
Makefile add make command to remove test files Jul 10, 2018
README.rst Added a pointer to the installation instructions to the README Nov 22, 2017
appveyor.yml Add new tox environments for testing wheel installation Apr 8, 2018
license.txt renamed license file May 4, 2017
requirements-dev.txt Update dependency versions Apr 6, 2018
requirements-doc.txt sphinx-gallery tutorial for brain observatory files first version Apr 25, 2018
requirements.txt add pandas as a requirement Jun 16, 2018
setup.cfg packaging: Create one wheel for both py2 and py3 instead of having two Nov 13, 2017
setup.py add pandas to setup.py Jun 18, 2018
test.py Ignore brain_observatory file's flake8 errors Apr 26, 2018
tox.ini Add new tox environments for executing gallery tests Apr 25, 2018
versioneer.py fixed spelling (#585) Aug 13, 2018

README.rst

PyNWB

Documentation of PyNWB can be found at https://pynwb.readthedocs.io

Latest Release

Build Status

Linux macOS Windows
https://circleci.com/gh/NeurodataWithoutBorders/pynwb.svg?style=shield https://travis-ci.org/NeurodataWithoutBorders/pynwb.svg?branch=dev https://ci.appveyor.com/api/projects/status/9y808ua44yldy5n3?svg=true

Conda

https://circleci.com/gh/conda-forge/pynwb-feedstock.svg?style=shield

Overall Health

Requirements Status

NWB Format API

PyNWB is a Python package for working with NWB files. It provides a high-level API for efficiently working with Neurodata stored in the NWB format.

Neurodata Without Borders: Neurophysiology (NWB:N) is a project to develop a unified data format for cellular-based neurophysiology data, focused on the dynamics of groups of neurons measured under a large range of experimental conditions.

The NWB:N team consists of neuroscientists and software developers who recognize that adoption of a unified data format is an important step toward breaking down the barriers to data sharing in neuroscience.

Installation

See the PyNWB documentation for details http://pynwb.readthedocs.io/en/latest/getting_started.html#installation

Code of Conduct

This project and everyone participating in it is governed by our code of conduct guidelines . By participating, you are expected to uphold this code.

Contributing

For details on how to contribute to PyNWB see our contribution guidelines .

LICENSE

"pynwb" Copyright (c) 2017, The Regents of the University of California, through Lawrence Berkeley National Laboratory (subject to receipt of any required approvals from the U.S. Dept. of Energy). All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

  1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
  2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
  3. Neither the name of the University of California, Lawrence Berkeley National Laboratory, U.S. Dept. of Energy nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission.

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

You are under no obligation whatsoever to provide any bug fixes, patches, or upgrades to the features, functionality or performance of the source code ("Enhancements") to anyone; however, if you choose to make your Enhancements available either publicly, or directly to Lawrence Berkeley National Laboratory, without imposing a separate written license agreement for such Enhancements, then you hereby grant the following license: a non-exclusive, royalty-free perpetual license to install, use, modify, prepare derivative works, incorporate into other computer software, distribute, and sublicense such enhancements or derivative works thereof, in binary and source code form.

COPYRIGHT

"pynwb" Copyright (c) 2017, The Regents of the University of California, through Lawrence Berkeley National Laboratory (subject to receipt of any required approvals from the U.S. Dept. of Energy). All rights reserved. If you have questions about your rights to use or distribute this software, please contact Berkeley Lab's Innovation & Partnerships ce at IPO@lbl.gov.

NOTICE. This Software was developed under funding from the U.S. Department of Energy and the U.S. Government consequently retains certain rights. As such, the U.S. Government has been granted for itself and others acting on its behalf a paid-up, nonexclusive, irrevocable, worldwide license in the Software to reproduce, distribute copies to the public, prepare derivative works, and perform publicly and display publicly, and to permit other to do so.