Data availability:
- GLab_SC2_sequencing_data: Contact Study Authors
- vaccine_metadata: Contact Study Authors
- Vaccnation trends in Connecticut: https://data.cdc.gov/Vaccinations/COVID-19-Vaccination-Trends-in-the-United-States-N/rh2h-3yt2
- Estimated case counts and Rt values: https://api2.covidestim.org
- Pangolin variant names: https://github.com/cov-lineages
- Variant Frequencies in Connecticut: https://covidtrackerct.com/
- GISAID data: https://gisaid.org/
Acknowledgements: