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Point based 3D segmentation plugin for FIJI
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README.md

LimeSeg

3D segmentation

LimeSeg is a modular 3D image segmentation method. Based on the idea of SURFace ELements, LimeSeg resembles a highly coarse-grained simulation of a lipid membrane in which a set of particles, analogous to lipid molecules, are attracted to local image maxima.

Documentation

For the documentation, go to http://imagej.net/LimeSeg/.

Citation

LimeSeg is available through Fiji, and is based on a publication. If you use it successfully for your research please be so kind to cite our work (https://doi.org/10.1186/s12859-018-2471-0).

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