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Update to use `nix shell` instead of `nix run` #422
This was renamed upstream, see NixOS/nix#3551
For reference, I ran into this here: https://github.com/NixOS/nixos-homepage/pull/418/checks?check_run_id=663327024
We should wait for a new Nix release or even for it to land in NixOS stable? At least add which Nix version is needed for it to work.
How should this dependency hell be handled?