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bintools-wrapper change causes builds to fail on darwin - ld: Assertion failed #105573

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avdv opened this issue Dec 1, 2020 · 9 comments
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6.topic: darwin Running or building packages on Darwin

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@avdv
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avdv commented Dec 1, 2020

TLDR;

The builds error out with:

ld: Assertion failed: (targetAtom != NULL), function Fixup, file ../../../../ld64/src/ld/ld.hpp, line 776.

Currently effected packages are:

@uri-canva bisected this commit 473b341 to be responsible for the error, and verified that reverting that change makes them build again.


Seems like libmodplug broke in eval 1628634, when the changes for big sur where merged: #98541 (changes)

Could this be a reason for those linker errors?

Originally posted by @avdv in #105439 (comment)

For posterity:

load_pat.lo modplug.lo -lm 
libtool: link: clang++ -dynamiclib -Wl,-undefined -Wl,dynamic_lookup -o .libs/libmodplug.1.dylib  .libs/sndmix.o .libs/sndfile.o .libs/snd_fx.o .libs/snd_flt.o .libs/snd_dsp.o .libs/fastmix.o .libs/mmcmp.o .libs/load_xm.o .libs/load_wav.o .libs/load_umx.o .libs/load_ult.o .libs/load_stm.o .libs/load_s3m.o .libs/load_ptm.o .libs/load_okt.o .libs/load_mtm.o .libs/load_mod.o .libs/load_med.o .libs/load_mdl.o .libs/load_it.o .libs/load_far.o .libs/load_dsm.o .libs/load_dmf.o .libs/load_dbm.o .libs/load_ams.o .libs/load_amf.o .libs/load_669.o .libs/load_j2b.o .libs/load_mt2.o .libs/load_psm.o .libs/load_abc.o .libs/load_mid.o .libs/load_pat.o .libs/modplug.o   -lm  -g -O2 -mmacosx-version-min=10.5 -mmacosx-version-min=10.5   -install_name  /nix/store/v8hkzrplvwcikdidk761a04by98wjs3j-libmodplug-0.8.9.0/lib/libmodplug.1.dylib -compatibility_version 2 -current_version 2.0 -Wl,-single_module
0  0x10ff56a51  __assert_rtn + 129
1  0x11012f444  ld::passes::stubs::x86_64::classic::LazyPointerAtom::LazyPointerAtom(ld::passes::stubs::Pass&, ld::Atom const&, bool, bool) + 420
2  0x11012cc6a  ld::passes::stubs::Pass::makeStub(ld::Atom const&, bool) + 2762
3  0x11012dc5f  ld::passes::stubs::Pass::process(ld::Internal&) + 2511
4  0x11012e2c0  ld::passes::stubs::doPass(Options const&, ld::Internal&) + 128
5  0x10ff57ff4  main + 1860
A linker snapshot was created at:
        /tmp/libmodplug.1.dylib-2020-10-22-030016.ld-snapshot
ld: Assertion failed: (targetAtom != NULL), function Fixup, file ../../../../ld64/src/ld/ld.hpp, line 776.
clang-7: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [Makefile:492: libmodplug.la] Error 1

Seems to happen with clang 6 and clang 7.

@avdv
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avdv commented Dec 1, 2020

On staging-next, it failed in this build first: https://hydra.nixos.org/build/130716618 (2020-11-18 16:22:16), and in the builds that followed: https://hydra.nixos.org/build/130716618/evals

986c2d to 77ff58

@veprbl veprbl added the 6.topic: darwin Running or building packages on Darwin label Dec 2, 2020
@avdv
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avdv commented Dec 3, 2020

Since @uri-canva has identified 473b341 being the culprit for the same linker failure for bazel here, could anyone try to verify whether reverting the change to bintools-wrapper or manually adding the -macosx_version_min 10.12 linker option back makes libmodplug build on darwin again?!

@uri-canva
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Verified reverting the change fixes libmodplug.

@avdv avdv mentioned this issue Dec 4, 2020
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@r-burns
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r-burns commented Dec 4, 2020

Assertion failure is raised from here:
https://github.com/tpoechtrager/cctools-port/blob/43f32a4c61b5ba7fde011e816136c550b1b3146f/cctools/ld64/src/ld/ld.hpp#L776
I wonder if this is an issue with cctools-port, or the way we package it? Seems like an internal error.

@avdv avdv changed the title libmodplug fails to build on darwin - ld: Assertion failed binutils-wrapper change causes builds to fail on darwin - ld: Assertion failed Dec 4, 2020
@avdv avdv changed the title binutils-wrapper change causes builds to fail on darwin - ld: Assertion failed bintools-wrapper change causes builds to fail on darwin - ld: Assertion failed Dec 4, 2020
@avdv
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avdv commented Dec 7, 2020

The assumption with the bintools-wrapper change seems to be that clang will add a -macosx_min_version parameter for the linker automatically. But, what happens if it does not do that, or if the build itself adds a -mmacosx-min-version already - just as libmodplug does?

For libmodplug, it fixes the build when we remove the linker flags: e2f0da2

--- a/configure	2020-12-07 14:12:35.422830927 +0100
+++ b/configure	2020-12-07 14:20:22.479538391 +0100
@@ -16731,8 +16731,8 @@
 # require 10.5+ for osx/x86_64 builds
 case "$host" in
 	x86_64-*-darwin*)
-		CXXFLAGS="$CXXFLAGS -mmacosx-version-min=10.5"
-		LDFLAGS="$LDFLAGS -mmacosx-version-min=10.5" ;;
+		#CXXFLAGS="$CXXFLAGS -mmacosx-version-min=10.5"
+		#LDFLAGS="$LDFLAGS -mmacosx-version-min=10.5" ;;
 esac

 # symbol visibility

see successful build

I have no idea why this happens; is 10.5 just too old for the cctools / sdk combo?

avdv added a commit to avdv/nixpkgs that referenced this issue Dec 21, 2020
Fails with
```
0  0x103e67a51  __assert_rtn + 129
1  0x104040444  ld::passes::stubs::x86_64::classic::LazyPointerAtom::LazyPointerAtom(ld::passes::stubs::Pass&, ld::Atom const&, bool, bool) + 420
2  0x10403dc6a  ld::passes::stubs::Pass::makeStub(ld::Atom const&, bool) + 2762
3  0x10403ec5f  ld::passes::stubs::Pass::process(ld::Internal&) + 2511
4  0x10403f2c0  ld::passes::stubs::doPass(Options const&, ld::Internal&) + 128
5  0x103e68ff4  main + 1860
6  0x7fff68dc3cc9  start + 1
A linker snapshot was created at:
        /tmp/ijar-2020-11-01-111228.ld-snapshot
ld: Assertion failed: (targetAtom != NULL), function Fixup, file ../../../../ld64/src/ld/ld.hpp, line 776.
clang-6.0: error: linker command failed with exit code 1 (use -v to see invocation)
```

See NixOS#105573 for details.
@avdv
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avdv commented Feb 2, 2021

Recently I was able to fix building bazel on Darwin. And since trying to build bazel-watcher on top of this fix no longer fails with the linker error we have seen before, I am inclined to close this issue.

I'll open a new one for bazel-watcher which now fails with "fatal error: 'deque' file not found" (or alternatively any other standard C++ header).

@avdv avdv closed this as completed Feb 2, 2021
@avdv
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avdv commented Feb 2, 2021

Um, actually that was probably too fast. Since bazel-watcher also uses the bazel tools/osx/xcode_configure.bzl it will eventually end up with the same linker error -- only now cannot even get so far.

@avdv avdv reopened this Feb 2, 2021
@andrewhamon
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I think this is still an issue? At least, if I add pkgs.bazel to my shell.nix and try to build my project, I get errors loading headers, e.g.

external/com_google_protobuf/src/google/protobuf/descriptor_database.h:40:10: fatal error: 'map' file not found
#include <map>

I can resolve this by adding both clang and gcc to my shell.nix. Not one or the other, but both. Which feels very odd.

And unfortunately for me, having both gcc and clang present breaks other things (building ruby native extensions).

@avdv
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avdv commented Dec 14, 2021

Closing, since I could successfully build bazel-watcher on Darwin after working around the C++ header problem.

@avdv avdv closed this as completed Dec 14, 2021
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