Skip to content
This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.
R SQLPL TSQL Other
Branch: master
Clone or download
jreps added protocol to RA study
- added word document protocol
Latest commit 9b51fe1 Aug 21, 2019
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
Acne Antibiotics Create ReadMe.md Jul 9, 2018
BB3rdVs2nd first draft comparing 3rd BB vs 2nd BB Nov 7, 2018
BookOfOhdsiPrediction adding book of ohdsi prediction package Jun 4, 2019
CHADS2Tutorial reducing TAR for PLP tutorial 2018 Oct 10, 2018
COX2vsNSAIDsAKI add plotting module Nov 15, 2018
CVDRiskPredictionByDeepLearning Test code for 10-year MACCE prediction in HTN pts Apr 30, 2018
CancerTreatments miad Dec 14, 2017
CelecoxibPredictiveModels Merge branch 'master' of https://github.com/OHDSI/StudyProtocolSandbox Aug 18, 2016
ConceptPrevalence Merge pull request #51 from YorgosA/patch-1 Jun 18, 2019
ConditionClusters Package with that can be used to find similar conditions concepts ids… Aug 10, 2018
DataQuality subseting fix Oct 4, 2018
DeadModel death model update May 14, 2019
DenosumabBoneMetastases Endnote files newer? Mar 22, 2018
DepressionModels
DiabetesTxPath changed case of column names in studyPop and matchedPop Dec 19, 2018
EndometriosisRiskModels
EvaluatingCaseControl Added empirical calibration. Tidying up package. Mar 30, 2018
ExistingBleedingValidationInAF
ExistingStrokeRiskExternalValidation removed ohdsiRTools logging May 29, 2019
FebuxostatVsAllopurinolCVD 0.1 version document for Febuxostat Study Sep 26, 2018
FluAmiSccs
FractionValidationStudy updated main Sep 24, 2018
GeneProfiler
Generalizability adding JSON files to construct cohorts on ATLAS Aug 9, 2018
HFPredictionInT2DM Update insertion of cohort definitions from Atlas Jan 22, 2018
HFinT2DMValidation updated names to hfint2dmvalidation Oct 4, 2018
HyperprolactinemiaEstimation Adding Appendices for manuscript Jul 17, 2018
HypertensionCombination set cohort_end_date in negative controls as condition_start_date May 23, 2018
LargeScaleIncidenceRates Added empty SQL file Aug 10, 2017
LargeScaleModelingThyroid Initial LargeScaleModelingThyroid commit Apr 21, 2017
LearningCurve Add protocol template Feb 26, 2018
MmrvFebrileSeizureRisk add adjudicated negative controls Mar 9, 2018
NDCReview prelim results Mar 19, 2018
NoacStudy better debugging May 18, 2016
OHDSITrends Update .Rbuildignore Aug 27, 2018
ParacetamolvIbuprofen_MI Amendment to protocol Aug 27, 2018
PneumoniaRiskOfPPI update to skip PositiveSyntehsis Aug 14, 2018
PopEstMethodEvaluation Cleaning up code. Dec 13, 2017
PredictionOfRehospitalizationWithNote Custom Covariate Oct 4, 2018
PropensityScoreEvaluation PSEval - thread argument for a createPs call Jul 19, 2017
RASeverity added protocol to RA study Aug 21, 2019
RCDM-ETL @ 0634923 Add submodule Radiology CDM ETL module... Sep 18, 2018
RehospitalizationPredictionWithNote first draft for rehospitalization prediction Dec 10, 2018
SCA create SCA Sep 21, 2016
ShortTermMortalityPrediction
SkeletonCompartiveEffectStudy More work on skeleton May 11, 2018
SkeletonPredictionStudy updated skeleton PLP package Apr 29, 2019
SkeletonStudy Error message when email unsuccessful Jun 8, 2015
SkeletonValidationStudy updated prediction skeletons Mar 15, 2019
SmokingModel smoking model Oct 25, 2018
StableDM2Patients tweak default file name and email subject Apr 16, 2015
StrokeInAfibValidationStudy added oracleTempSchema Oct 11, 2018
TKRrevisionValidation added ParallelLogger to imports May 29, 2019
TenofovirVsEntecavir TenofovirVsTenofovir Study Oct 4, 2018
TicagrelorVsClopidogrel creating plots and tables Nov 28, 2018
TocilizumabCvRisk Adding study on tocilizumab and CV risk Jan 23, 2018
TofaRep Fixing README indentation May 8, 2018
angioedemaInAceValidation added oracleTempSchema option Oct 11, 2018
externalValidation/inst/models/CCAE
largeScalePrediction Update README.md May 21, 2017
mortalityValidation added ParallelLogger to imports May 29, 2019
noteCovariateExtraction R file name revise Oct 18, 2018
ohdsi2018live2Validation added ohdsi live package Oct 12, 2018
radiologyCovariateExtraction to add clusterLapply Dec 4, 2018
rapidOATransportability added rapidOATransportability project Sep 23, 2016
readmissionMdcdValidation revision prediction package Dec 13, 2018
themis add coded values Nov 23, 2018
.gitignore Package with that can be used to find similar conditions concepts ids… Aug 10, 2018
.gitmodules added new ConceptPrevalence study Apr 4, 2019
.travis.yml revert out of r-travis (requires single DESCRIPTION) Aug 24, 2017
README.md Update README.md May 4, 2015
StudyProtocolSandbox.Rproj Added initial version of drug utilization in children study code. Sep 8, 2015
deploy.sh remove hip fracture from travis Apr 3, 2017

README.md

Study Protocol Sandbox

Repository for developing OHDSI Collaborator Research Protocols

New Study Development

Build off of R package SkeletonStudy.

Acknowledgements

  • This project is supported in part through the National Science Foundation grant IIS 1251151.
You can’t perform that action at this time.