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autoreconf -fi fails on Debian unstable #560

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@sebastic

Description

@sebastic

Building the grass package on Debian unstable fails:

autoheader: warning: missing template: HAVE_GDAL
autoheader: Use AC_DEFINE([HAVE_GDAL], [], [Description])
autoheader: warning: missing template: HAVE_GEOS
autoheader: warning: missing template: HAVE_INT64_T
autoheader: warning: missing template: HAVE_LARGEFILES
autoheader: warning: missing template: HAVE_LIBATLAS
autoheader: warning: missing template: HAVE_LIBBLAS
autoheader: warning: missing template: HAVE_LIBLAPACK
autoheader: warning: missing template: HAVE_LIBLAS
autoheader: warning: missing template: HAVE_LONG_LONG_INT
autoheader: warning: missing template: HAVE_NETCDF
autoheader: warning: missing template: HAVE_OGR
autoheader: warning: missing template: HAVE_PBUFFERS
autoheader: warning: missing template: HAVE_PDAL
autoheader: warning: missing template: HAVE_PIXMAPS
autoheader: warning: missing template: HAVE_POSTGRES
autoheader: warning: missing template: HAVE_PQCMDTUPLES
autoheader: warning: missing template: HAVE_SOCKET
autoheader: warning: missing template: HAVE_SQLITE
autoheader: warning: missing template: OPENGL_AQUA
autoheader: warning: missing template: OPENGL_WINDOWS
autoheader: warning: missing template: OPENGL_X11
autoheader: warning: missing template: STATIC_BUILD
autoheader: warning: missing template: USE_NLS
autoheader: warning: missing template: USE_PROJ4API
autoheader: warning: missing template: _POSIX_PTHREAD_SEMANTICS
autoheader: warning: missing template: _REENTRANT
autoreconf: /usr/bin/autoheader failed with exit status: 1
dh_autoreconf: error: autoreconf -f -i returned exit code 1

This applies to 7.8.2 & 7.8.3-rc1 at least, likely all versions of grass.

To reproduce (on Debian unstable):

apt source grass
apt build-dep grass
cd grass-*/
autoreconf -fi

Verbose output of autoreconf & autoheader:

# autoreconf -fiv
autoreconf: Entering directory `.'
autoreconf: configure.in: not using Gettext
autoreconf: configure.in: not using aclocal
autoreconf: configure.in: tracing
autoreconf: configure.in: not using Libtool
autoreconf: running: /usr/bin/autoconf --force
autoreconf: running: /usr/bin/autoheader --force
autoheader: warning: missing template: HAVE_GDAL
autoheader: Use AC_DEFINE([HAVE_GDAL], [], [Description])
autoheader: warning: missing template: HAVE_GEOS
autoheader: warning: missing template: HAVE_INT64_T
autoheader: warning: missing template: HAVE_LARGEFILES
autoheader: warning: missing template: HAVE_LIBATLAS
autoheader: warning: missing template: HAVE_LIBBLAS
autoheader: warning: missing template: HAVE_LIBLAPACK
autoheader: warning: missing template: HAVE_LIBLAS
autoheader: warning: missing template: HAVE_LONG_LONG_INT
autoheader: warning: missing template: HAVE_NETCDF
autoheader: warning: missing template: HAVE_OGR
autoheader: warning: missing template: HAVE_PBUFFERS
autoheader: warning: missing template: HAVE_PDAL
autoheader: warning: missing template: HAVE_PIXMAPS
autoheader: warning: missing template: HAVE_POSTGRES
autoheader: warning: missing template: HAVE_PQCMDTUPLES
autoheader: warning: missing template: HAVE_SOCKET
autoheader: warning: missing template: HAVE_SQLITE
autoheader: warning: missing template: OPENGL_AQUA
autoheader: warning: missing template: OPENGL_WINDOWS
autoheader: warning: missing template: OPENGL_X11
autoheader: warning: missing template: STATIC_BUILD
autoheader: warning: missing template: USE_NLS
autoheader: warning: missing template: USE_PROJ4API
autoheader: warning: missing template: _POSIX_PTHREAD_SEMANTICS
autoheader: warning: missing template: _REENTRANT
autoreconf: /usr/bin/autoheader failed with exit status: 1
# autoheader -vd   
autoheader: autoheader: running '/usr/bin/autom4te' --language=autoconf  --debug --verbose to trace from configure.in
autoheader: running: '/usr/bin/autom4te' --language=autoconf  --debug --verbose --trace AC_CONFIG_HEADERS:'$$config_h ||= '"'"'$1'"'"';' --trace AH_OUTPUT:'$$verbatim{'"'"'$1'"'"'} = '"'"'$2'"'"';' --trace AC_DEFINE_TRACE_LITERAL:'$$symbol{'"'"'$1'"'"'} = 1;' configure.in >/tmp/ah0dvdMO/traces.pl
autom4te: formatting traces for `/tmp/am4thom8n0/dependencies': include, m4_include
autom4te: up_to_date (autom4te.cache/traces.0): up to date
autom4te: the trace request object is:
autom4te: $VAR1 = bless( [
autom4te:                  '0',
autom4te:                  1,
autom4te:                  [
autom4te:                    '/usr/share/autoconf'
autom4te:                  ],
autom4te:                  [
autom4te:                    '/usr/share/autoconf/autoconf/autoconf.m4f',
autom4te:                    'aclocal.m4',
autom4te:                    'configure.in'
autom4te:                  ],
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autom4te:                    '_m4_warn' => 1,
autom4te:                    '_AM_COND_ENDIF' => 1,
autom4te:                    'AM_AUTOMAKE_VERSION' => 1,
autom4te:                    'LT_INIT' => 1,
autom4te:                    'AC_FC_PP_DEFINE' => 1,
autom4te:                    'AM_PROG_LIBTOOL' => 1,
autom4te:                    'AM_SILENT_RULES' => 1,
autom4te:                    'LT_CONFIG_LTDL_DIR' => 1,
autom4te:                    'AC_DEFINE_TRACE_LITERAL' => 1,
autom4te:                    'AM_MAKEFILE_INCLUDE' => 1,
autom4te:                    '_AM_COND_ELSE' => 1,
autom4te:                    'AC_CONFIG_LINKS' => 1,
autom4te:                    'm4_pattern_allow' => 1,
autom4te:                    'AH_OUTPUT' => 1,
autom4te:                    'AC_INIT' => 1,
autom4te:                    '_AM_SUBST_NOTMAKE' => 1,
autom4te:                    'AM_PROG_MOC' => 1,
autom4te:                    'AM_GNU_GETTEXT' => 1,
autom4te:                    'AC_PROG_LIBTOOL' => 1,
autom4te:                    'include' => 1,
autom4te:                    'AC_LIBSOURCE' => 1,
autom4te:                    'AC_CANONICAL_HOST' => 1,
autom4te:                    'AM_NLS' => 1,
autom4te:                    'm4_pattern_forbid' => 1,
autom4te:                    'AM_INIT_AUTOMAKE' => 1,
autom4te:                    '_AM_COND_IF' => 1,
autom4te:                    'AC_CONFIG_SUBDIRS' => 1,
autom4te:                    'AC_REQUIRE_AUX_FILE' => 1,
autom4te:                    'AC_FC_FREEFORM' => 1,
autom4te:                    'AM_PROG_CXX_C_O' => 1,
autom4te:                    'AC_CANONICAL_SYSTEM' => 1,
autom4te:                    'AM_PATH_GUILE' => 1,
autom4te:                    'AC_SUBST_TRACE' => 1,
autom4te:                    'AC_FC_PP_SRCEXT' => 1,
autom4te:                    'AC_CONFIG_LIBOBJ_DIR' => 1,
autom4te:                    'LT_SUPPORTED_TAG' => 1,
autom4te:                    'AC_CANONICAL_BUILD' => 1,
autom4te:                    'AM_GNU_GETTEXT_INTL_SUBDIR' => 1,
autom4te:                    'AM_PROG_F77_C_O' => 1,
autom4te:                    'm4_include' => 1,
autom4te:                    '_LT_AC_TAGCONFIG' => 1,
autom4te:                    'AC_SUBST' => 1,
autom4te:                    'sinclude' => 1,
autom4te:                    'AC_CONFIG_AUX_DIR' => 1,
autom4te:                    'AC_FC_SRCEXT' => 1,
autom4te:                    'AM_XGETTEXT_OPTION' => 1,
autom4te:                    '_AM_MAKEFILE_INCLUDE' => 1,
autom4te:                    'AM_CONDITIONAL' => 1
autom4te:                  }
autom4te:                ], 'Autom4te::Request' );
autom4te: formatting traces for `/tmp/am4thom8n0/warnings': _m4_warn
autom4te: reading /tmp/am4thom8n0/warnings
autom4te: formatting traces for `-': AC_CONFIG_HEADERS, AC_DEFINE_TRACE_LITERAL, AH_OUTPUT
autoheader: autoheader: `do'ing /tmp/ah0dvdMO/traces.pl:
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| #undef HAVE_AD2_H';
| $symbol{'HAVE_AD2_H'} = 1;
| $verbatim{'HAVE_PTHREAD_H'} = '/* Define to 1 if you have the <pthread.h> header file. */
| #undef HAVE_PTHREAD_H';
| $symbol{'HAVE_PTHREAD_H'} = 1;
| $verbatim{'HAVE_OMP_H'} = '/* Define to 1 if you have the <omp.h> header file. */
| #undef HAVE_OMP_H';
| $symbol{'HAVE_OMP_H'} = 1;
| $verbatim{'HAVE_OPENCL_OPENCL_H'} = '/* Define to 1 if you have the <OpenCL/opencl.h> header file. */
| #undef HAVE_OPENCL_OPENCL_H';
| $symbol{'HAVE_OPENCL_OPENCL_H'} = 1;
| $verbatim{'HAVE_CL_CL_H'} = '/* Define to 1 if you have the <CL/cl.h> header file. */
| #undef HAVE_CL_CL_H';
| $symbol{'HAVE_CL_CL_H'} = 1;
| $symbol{'_FILE_OFFSET_BITS'} = 1;
| $verbatim{'_FILE_OFFSET_BITS'} = '/* Number of bits in a file offset, on hosts where this is settable. */
| #undef _FILE_OFFSET_BITS';
| $symbol{'_LARGE_FILES'} = 1;
| $verbatim{'_LARGE_FILES'} = '/* Define for large files, on AIX-style hosts. */
| #undef _LARGE_FILES';
| $symbol{'_LARGEFILE_SOURCE'} = 1;
| $verbatim{'_LARGEFILE_SOURCE'} = '/* Define to make fseeko visible on some hosts (e.g. glibc 2.2). */
| #undef _LARGEFILE_SOURCE';
| $symbol{'_LARGEFILE_SOURCE'} = 1;
| $verbatim{'_LARGEFILE_SOURCE'} = '/* Define to make fseeko visible on some hosts (e.g. glibc 2.2). */
| #undef _LARGEFILE_SOURCE';
| $symbol{'HAVE_FSEEKO'} = 1;
| $verbatim{'HAVE_FSEEKO'} = '/* Define if fseeko (and presumably ftello) exists and is declared. */
| #undef HAVE_FSEEKO';
| $symbol{'HAVE_LARGEFILES'} = 1;

autoheader: warning: missing template: HAVE_GDAL
autoheader: Use AC_DEFINE([HAVE_GDAL], [], [Description])
autoheader: warning: missing template: HAVE_GEOS
autoheader: warning: missing template: HAVE_INT64_T
autoheader: warning: missing template: HAVE_LARGEFILES
autoheader: warning: missing template: HAVE_LIBATLAS
autoheader: warning: missing template: HAVE_LIBBLAS
autoheader: warning: missing template: HAVE_LIBLAPACK
autoheader: warning: missing template: HAVE_LIBLAS
autoheader: warning: missing template: HAVE_LONG_LONG_INT
autoheader: warning: missing template: HAVE_NETCDF
autoheader: warning: missing template: HAVE_OGR
autoheader: warning: missing template: HAVE_PBUFFERS
autoheader: warning: missing template: HAVE_PDAL
autoheader: warning: missing template: HAVE_PIXMAPS
autoheader: warning: missing template: HAVE_POSTGRES
autoheader: warning: missing template: HAVE_PQCMDTUPLES
autoheader: warning: missing template: HAVE_SOCKET
autoheader: warning: missing template: HAVE_SQLITE
autoheader: warning: missing template: OPENGL_AQUA
autoheader: warning: missing template: OPENGL_WINDOWS
autoheader: warning: missing template: OPENGL_X11
autoheader: warning: missing template: STATIC_BUILD
autoheader: warning: missing template: USE_NLS
autoheader: warning: missing template: USE_PROJ4API
autoheader: warning: missing template: _POSIX_PTHREAD_SEMANTICS
autoheader: warning: missing template: _REENTRANT

This may be caused by the upgrade to automake 1.16.2.

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