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Installation / Running

  • It's in /mnt/storage/karr/projects/clontogene/blah5
  • Install pip install -r requirements.txt
  • python -m spacy download en`


  • curl -F file='@data/6234315.json' > out.json
  • PubAnnotation style: curl -d text="example text"

Querying OGER

  • curl -d "@filename"

To Do

  • Test integration with PubAnnotation
  • Automatically get OGER annos
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