julia gen_fusion_file.jl -r hg19 -g TRFPgenes.txt -f TRFP.csv
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
WARNING: Base.String is deprecated, use AbstractString instead.
  likely near /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:119
ERROR: LoadError: UndefVarError: readstring not defined
 in detect at /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:33
 in main at /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl:22
while loading /home/affymetrix2/Desktop/NGS/geneFuse/gen_fusion_file.jl, in expression starting on line 119