{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":745675708,"defaultBranch":"main","name":"HiIP","ownerLogin":"OpenOmics","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2024-01-19T21:10:46.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/97639341?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1705698702.0","currentOid":""},"activityList":{"items":[{"before":"26750cae3287e90ce72a81f501c01376c1f64c70","after":"1c57cd6b2046c6eb31d3d31ec7c0ccb4c7ea6173","ref":"refs/heads/main","pushedAt":"2024-03-19T15:23:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tovahmarkowitz","name":"Tovah Markowitz","path":"/tovahmarkowitz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22156648?s=80&v=4"},"commit":{"message":"adding ability to merge replicates","shortMessageHtmlLink":"adding ability to merge replicates"}},{"before":"c5ae7c0cab69dc41b3a87beb09d259c19c461382","after":"a9c5794c0504170b95d97a095e2765d68c163d38","ref":"refs/heads/gh-pages","pushedAt":"2024-03-13T19:57:13.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed 26750ca with MkDocs version: 1.4.3","shortMessageHtmlLink":"Deployed 26750ca with MkDocs version: 1.4.3"}},{"before":"90988e44d637080d650921c9bd35047737b91e03","after":"26750cae3287e90ce72a81f501c01376c1f64c70","ref":"refs/heads/main","pushedAt":"2024-03-13T19:56:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tovahmarkowitz","name":"Tovah Markowitz","path":"/tovahmarkowitz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22156648?s=80&v=4"},"commit":{"message":"Update index.md","shortMessageHtmlLink":"Update index.md"}},{"before":"a59110f245f8be6f5005a00b96f20817759e2669","after":"90988e44d637080d650921c9bd35047737b91e03","ref":"refs/heads/main","pushedAt":"2024-03-11T22:11:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Updating usage statement/synopsis of the run sub command","shortMessageHtmlLink":"Updating usage statement/synopsis of the run sub command"}},{"before":"43df3ade13022332749b315382c9577b556598b2","after":"a59110f245f8be6f5005a00b96f20817759e2669","ref":"refs/heads/main","pushedAt":"2024-03-11T22:05:56.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Adding cli option to pass a groups file","shortMessageHtmlLink":"Adding cli option to pass a groups file"}},{"before":"e8758812d8f626aad55e11f1232abfd48a159413","after":"c5ae7c0cab69dc41b3a87beb09d259c19c461382","ref":"refs/heads/gh-pages","pushedAt":"2024-02-12T22:17:56.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed 43df3ad with MkDocs version: 1.4.3","shortMessageHtmlLink":"Deployed 43df3ad with MkDocs version: 1.4.3"}},{"before":"9e8f54de6a179ad1b2d204968336fee2ff6dd4b3","after":"43df3ade13022332749b315382c9577b556598b2","ref":"refs/heads/main","pushedAt":"2024-02-12T22:17:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Adding default value to docs for --CTCF flag","shortMessageHtmlLink":"Adding default value to docs for --CTCF flag"}},{"before":"a17d85b741e29040776aa1aaec330874af475894","after":"e8758812d8f626aad55e11f1232abfd48a159413","ref":"refs/heads/gh-pages","pushedAt":"2024-02-12T22:13:26.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed 9e8f54d with MkDocs version: 1.4.3","shortMessageHtmlLink":"Deployed 9e8f54d with MkDocs version: 1.4.3"}},{"before":"771480cf97f09e9c3ccfb73a1f4ee5d041ceaa42","after":"9e8f54de6a179ad1b2d204968336fee2ff6dd4b3","ref":"refs/heads/main","pushedAt":"2024-02-12T22:12:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Adding new cli option and updating docs of run sub command","shortMessageHtmlLink":"Adding new cli option and updating docs of run sub command"}},{"before":"1c8d56a6fc82621a27a86cfa28a854c1607059f5","after":"771480cf97f09e9c3ccfb73a1f4ee5d041ceaa42","ref":"refs/heads/main","pushedAt":"2024-02-06T19:49:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Chore: Setting GRES for fastqc tmpdir.","shortMessageHtmlLink":"Chore: Setting GRES for fastqc tmpdir."}},{"before":"46210d21abfa801bb0e8829818184245422e75a6","after":"1c8d56a6fc82621a27a86cfa28a854c1607059f5","ref":"refs/heads/main","pushedAt":"2024-02-06T19:20:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Patch: Use tmpdir/lscratch with fastqc due to gpfs issue.","shortMessageHtmlLink":"Patch: Use tmpdir/lscratch with fastqc due to gpfs issue."}},{"before":"fc38256d20eeb0737f4a5e247fab779d67900724","after":"46210d21abfa801bb0e8829818184245422e75a6","ref":"refs/heads/main","pushedAt":"2024-02-05T16:53:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tovahmarkowitz","name":"Tovah Markowitz","path":"/tovahmarkowitz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22156648?s=80&v=4"},"commit":{"message":"Updating FitHiChIP","shortMessageHtmlLink":"Updating FitHiChIP"}},{"before":"dbd6ca65cc9567a779f1ada0e2224fc83c321271","after":"fc38256d20eeb0737f4a5e247fab779d67900724","ref":"refs/heads/main","pushedAt":"2024-02-02T21:42:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tovahmarkowitz","name":"Tovah Markowitz","path":"/tovahmarkowitz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22156648?s=80&v=4"},"commit":{"message":"Adding FitHiChIP","shortMessageHtmlLink":"Adding FitHiChIP"}},{"before":"5bc471694851fb4b0edcbb5703a3fc45985f7c50","after":"dbd6ca65cc9567a779f1ada0e2224fc83c321271","ref":"refs/heads/main","pushedAt":"2024-01-26T22:02:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tovahmarkowitz","name":"Tovah Markowitz","path":"/tovahmarkowitz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22156648?s=80&v=4"},"commit":{"message":"Adding QC metrics and .hic creation","shortMessageHtmlLink":"Adding QC metrics and .hic creation"}},{"before":"8c03d1d7aee013062cfe4c99a20c232f6ecfb2d1","after":"5bc471694851fb4b0edcbb5703a3fc45985f7c50","ref":"refs/heads/main","pushedAt":"2024-01-25T17:24:26.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Updating dry-run ci with new required options","shortMessageHtmlLink":"Updating dry-run ci with new required options"}},{"before":"1cdebfb5f7409b2c92b7672b920536197771d91d","after":"8c03d1d7aee013062cfe4c99a20c232f6ecfb2d1","ref":"refs/heads/main","pushedAt":"2024-01-25T17:06:37.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Updating option name in synopsis","shortMessageHtmlLink":"Updating option name in synopsis"}},{"before":"7df2104b333241824d44732774753b35f9fec839","after":"1cdebfb5f7409b2c92b7672b920536197771d91d","ref":"refs/heads/main","pushedAt":"2024-01-24T20:46:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"tovahmarkowitz","name":"Tovah Markowitz","path":"/tovahmarkowitz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/22156648?s=80&v=4"},"commit":{"message":"Adding alignment step","shortMessageHtmlLink":"Adding alignment step"}},{"before":"290043891e4e69962eb8c7b2b535e95c5d74a7d1","after":"7df2104b333241824d44732774753b35f9fec839","ref":"refs/heads/main","pushedAt":"2024-01-22T20:49:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Adding new--genome option","shortMessageHtmlLink":"Adding new--genome option"}},{"before":"30ff3887a46b6b67eb4e8cdc592d44f6c221e246","after":"290043891e4e69962eb8c7b2b535e95c5d74a7d1","ref":"refs/heads/main","pushedAt":"2024-01-22T19:15:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Adding fastqc","shortMessageHtmlLink":"Adding fastqc"}},{"before":"dabdb7a3ec964e2bb7ccb057ded3bb27835a2f4e","after":"30ff3887a46b6b67eb4e8cdc592d44f6c221e246","ref":"refs/heads/main","pushedAt":"2024-01-19T21:30:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Updating short description","shortMessageHtmlLink":"Updating short description"}},{"before":"502816fd2bbec97430c4be3cd9d7e7aa5371cd50","after":"a17d85b741e29040776aa1aaec330874af475894","ref":"refs/heads/gh-pages","pushedAt":"2024-01-19T21:28:17.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed dabdb7a with MkDocs version: 1.4.3","shortMessageHtmlLink":"Deployed dabdb7a with MkDocs version: 1.4.3"}},{"before":"284e19c1fb938313eea235397ca47c683a26feef","after":"dabdb7a3ec964e2bb7ccb057ded3bb27835a2f4e","ref":"refs/heads/main","pushedAt":"2024-01-19T21:27:28.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Updating Changelog","shortMessageHtmlLink":"Updating Changelog"}},{"before":null,"after":"502816fd2bbec97430c4be3cd9d7e7aa5371cd50","ref":"refs/heads/gh-pages","pushedAt":"2024-01-19T21:11:42.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed 284e19c with MkDocs version: 1.4.3","shortMessageHtmlLink":"Deployed 284e19c with MkDocs version: 1.4.3"}},{"before":null,"after":"284e19c1fb938313eea235397ca47c683a26feef","ref":"refs/heads/main","pushedAt":"2024-01-19T21:10:49.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"skchronicles","name":"Skyler Kuhn","path":"/skchronicles","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/18038345?s=80&v=4"},"commit":{"message":"Initial commit","shortMessageHtmlLink":"Initial commit"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEGcQb0gA","startCursor":null,"endCursor":null}},"title":"Activity ยท OpenOmics/HiIP"}