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Projects/Organizations

Material from the Joint Roadmap for Open Science Tools Summer 2018 Workshop, snapshot from the original etherpad: https://etherpad.wikimedia.org/p/JROSTS18-PROJECTS

Project Flashtalks

View all the project flashtalks on a YouTube playlist: https://www.youtube.com/playlist?list=PLmuJEyeapl2egJ1rjtniHaFP734ijTB1t

  1. ASAPbio, Jessica Polka, ASAPbio
    1. Project: http://asapbio.org/
    2. Slides: https://docs.google.com/presentation/d/1uc1jipssig2WNciHOv_qiP_8Oq7EP_s2wCATKuX8AF0/edit?usp=sharing
    3. Video: https://youtu.be/E2B-Z0jYn7s
  2. Code for Science & Society, Danielle Robinson, CS&S
    1. Project: https://codeforscience.org/
    2. Slides: https://docs.google.com/presentation/d/1IdFi7OEx7-n2A0vVMVmN1Pi6pQ12nWhLnGdywdFmjBg/edit?usp=sharing
    3. Video: https://youtu.be/9WsOf4YDmO8
  3. Coko: PubSweet for Journals and Micropubs, Adam Hyde, Coko
    1. Project: https://coko.foundation/
    2. Video: https://youtu.be/2Q1cpWQ92Yo
  4. The Common Workflow Language Standards for portable batch data analysis workflows, Michael R. Crusoe, CWL
    1. Project: https://www.commonwl.org, https://twitter.com/commonwl, http://www.researchobject.org/
    2. 60 second overview: https://www.youtube.com/watch?v=86eY8xs-Vo8
    3. Video: https://youtu.be/AzGp4vJxFI0
  5. Dat in researcher and data stewardship workflows, Joe Hand, CS&S
    1. Project: https://datproject.org/
    2. Slides: https://docs.google.com/presentation/d/1mjWabQs76LJw9riQ4_nZzKsoJ2Dvz058vAiR4aEglEA/edit?usp=sharing
    3. Video: https://youtu.be/JblIn7pczUQ
  6. DataCite, Trisha Cruse, DataCite
    1. Project: https://www.datacite.org/
    2. Slides: https://docs.google.com/presentation/d/1Nt7aFDTq67PRqdOjxz1kItlAt3zWEYhc9jO81g8vnSw/edit#slide=id.p1
    3. Video: https://youtu.be/O-ZE-32MTWg
  7. DOAJ, Judith Barnsby, DOAJ
    1. Project: https://doaj.org/
    2. Slides: https://docs.google.com/presentation/d/1ocpYGQVnzhtqD0a5ayruY5VIyS8f6HQ5FWef94voYwg/edit#slide=id.p4
    3. Video: https://youtu.be/TICB-EbDvpQ
  8. Dryad & CDL Partnership, Daniella Lowenberg, Dryad
    1. Project: https://datadryad.org/
    2. Slides: https://docs.google.com/presentation/d/1u2D_DJUsETwvOFDIEW-E_rK1jAuG1JIBa0UzvA2Z4BQ/edit?usp=sharing
    3. Video: https://youtu.be/CrY1TbzMW58
  9. Open Knowledge Maps, Peter Kraker, OKM
    1. Project: https://openknowledgemaps.org/
    2. Slides: https://docs.google.com/presentation/d/1a-SlmDIBKTjBuGiKQpeJxwp-C3CwdJaPHQfQy0Wh-Zc/edit?usp=sharing
    3. Video: https://youtu.be/Ni6QG-Mslqk
  10. Open Science MOOC, Jon Tennant, OSM
    1. Project: https://opensciencemooc.eu/
    2. Video: https://youtu.be/CtAKl79TyBI
  11. Crossref's open scholarly research graph (Metadata/Event Data), Chuck Koscher, Crossref
    1. Project: https://www.crossref.org/
    2. Slides: https://docs.google.com/presentation/d/1X8D9cYN9IJVinW-zBuAcE4FGxKKiAsj96c_O7YBSLTo/edit?usp=sharing
    3. Video: https://youtu.be/lmdFmXEU5AA
  12. Open Science Framework, Nici Pfeiffer, COS
    1. Project: https://osf.io/
    2. Slides: https://docs.google.com/presentation/d/1qckvABJ1gAdpFLwGa_NBddVPgjXbnkGfkrpf55AQp60/edit?usp=sharing
    3. Video: https://youtu.be/MLfib4MnR2w
  13. Unpaywall, Heather Piwowar
    1. Project: https://unpaywall.org/
    2. Slides: https://docs.google.com/presentation/d/10DUIxvBQQQLnbnCfxaEXS7_R_W5rRkaSZO1J2r5m2gM/edit?usp=sharing
    3. Video: https://youtu.be/cqqYk0EMfm0
  14. Public Knowledge Project, Juan Pablo Alperin
    1. Project: https://pkp.sfu.ca/
    2. Slides: https://docs.google.com/presentation/d/1_WfcNoj43ciC36ULGe63jax8n5oVqPqdYaiDmPibLwU/edit?usp=sharing
    3. Video: https://youtu.be/8n2vXIEOnp4
  15. Retraction Watch Database, Ivan Oransky
    1. Project: https://retractionwatch.com/
    2. Slides: https://www.slideshare.net/ivanoransky/the-retraction-watch-database
    3. Video: https://youtu.be/Rmgy4bxeYH4
  16. Synapse, Meredith Slota
    1. Project: https://www.synapse.org/
    2. Slides: https://docs.google.com/presentation/d/1NQaetGP1wuTgC-ixbL3MTFlMft-u5bbsUmhPV8DxeeA
    3. Video: https://youtu.be/rS5MKbDr-lg
  17. Paperbuzz, Jason Priem
    1. Project: https://paperbuzz.org/
    2. Slides: http://bit.ly/jrost-impactstory-lightning
    3. Video: https://youtu.be/6VKP8IG47Rg
  18. Underlay & PubPub, SJ Klein
    1. Project: https://underlay.pubpub.org/
    2. Slides: https://docs.google.com/presentation/d/1TU4Ow_jOxKg8iK0JFEAp5t6C7_4_sKFsfz8OVEQi1Qs/edit?usp=sharing
    3. Video: https://youtu.be/RT-O4GDsOCE
  19. Wikidata and WikiCite, Dario Taraborelli
    1. Project: https://www.wikidata.org/, http://wikicite.org/
    2. Slides: http://bit.ly/WikiJROST
    3. Video: https://youtu.be/iFIiuyPz6Lk
  20. Supporting Research Communications: A Guide, Jennifer Lin, John Chodacki, Trisha Cruse
    1. Project: https://www.supporters.guide/
    2. Slides: https://docs.google.com/presentation/d/1zMG2g_qHBRnXPuSg2hZzj7V-R3vvVU5tpejoru_aUZw/edit?usp=sharing
    3. Video: https://youtu.be/RoX35tP1Woc
  21. FAIR Data Initiative, Brooks Hanson, AGU
    1. Project: http://www.copdess.org/enabling-fair-data-project/
    2. Video: https://youtu.be/WjtxLGD21EA
  22. Apache Arrow, Wes McKinney, Ursa Labs
    1. Project: http://arrow.apache.org/
    2. Slides: https://www.slideshare.net/wesm/apache-arrow-crosslanguage-development-platform-for-inmemory-data-105427919
    3. Video: https://youtu.be/qh7Cpl4rFy4
  23. Numpy, Jonathan Dugan, UC Berkeley Institute for Data Science
    1. Project: https://bids.berkeley.edu
    2. Roadmap: https://github.com/numpy/numpy/wiki/NumPy-Roadmap
    3. Video: https://youtu.be/6_i06eGjg_M
  24. Hypothesis, Dan Whaley, Hypothesis
    1. Project: https://web.hypothes.is/
    2. Slides: https://docs.google.com/presentation/d/1evfkjvkNxQD8bFBEIHtcDyxOsbh5xqP34yjpxccgTBE/edit#slide=id.g411b5a4f65_0_116
    3. Video: https://youtu.be/XGAt4ZcP19Q
  25. These two flashtalks were not delivered at the workshop, but may be recorded later and added to the video collection:
    1. DMPtool/DMProadmap, John Chodacki, CDL
      1. Project: https://dmptool.org/, https://github.com/DMPRoadmap/roadmap
      2. Slides: https://docs.google.com/presentation/d/12f-LGydiBjvIy5f-abk5LK05LdbAaa1-fWfXHF7pTd0/edit?usp=sharing
      3. Video: https://youtu.be/ZEGSjHQDFl0
    2. JupyterLab, Brian Granger

Project Demos: Demo Live at the Workshop?

To be scheduled during Day 2 breaks

Yes

Maybe

No

Notes

See also the projects + orgs mentioned in the 1st talk! https://101innovations.wordpress.com/

Synapse: ... keep your data where you like; we'll link to it. RetractionWatch: don't feel they can make bulk data free to all (but want to); paid access is primary support

[Bianca] Question for Hypothesis: "Enable groups with special requirements, like ORCID auth" was mentioned under 'What's coming'. I wondered whether Is there also discussion of extending such functionalities to all users, where applicable? E.g. I would love to be able to sign in with ORCID to my general Hypothesis account, not just when I'd be annotating eLife articles... Or at least link up my annotations made through both routes. #userstory ;-) (and apologies if this is possible already and I just missed it!)

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