diff --git a/pyproject.toml b/pyproject.toml
index bcc37b62d..357cf0460 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -135,27 +135,10 @@ module = [
     "optimagic.differentiation.generate_steps",
     "optimagic.differentiation.richardson_extrapolation",
 
-    "estimagic.estimation",
-    "estimagic.estimation.estimate_ml",
-    "estimagic.estimation.estimate_msm",
-    "estimagic.estimation.estimation_summaries",
-    "estimagic.estimation.msm_weighting",
-
     "optimagic.examples",
     "optimagic.examples.criterion_functions",
     "optimagic.examples.numdiff_functions",
-    "estimagic.examples",
-    "estimagic.examples.logit",
 
-    "estimagic.inference",
-    "estimagic.inference.bootstrap_ci",
-    "estimagic.inference.bootstrap_helpers",
-    "estimagic.inference.bootstrap_outcomes",
-    "estimagic.inference.bootstrap_samples",
-    "estimagic.inference.bootstrap",
-    "estimagic.inference.ml_covs",
-    "estimagic.inference.msm_covs",
-    "estimagic.inference.shared",
 
     "optimagic.logging",
     "optimagic.logging.create_tables",
@@ -165,39 +148,43 @@ module = [
     "optimagic.logging.write_to_database",
 
     "optimagic.optimization",
-    "optimagic.optimization.subsolvers",
-    "optimagic.optimization.subsolvers._conjugate_gradient",
-    "optimagic.optimization.subsolvers._steihaug_toint",
-    "optimagic.optimization.subsolvers._trsbox",
-    "optimagic.optimization.subsolvers.bntr",
-    "optimagic.optimization.subsolvers.gqtpar",
-    "optimagic.optimization.subsolvers.linear_subsolvers",
     "optimagic.optimization.algo_options",
-    "optimagic.optimization.bhhh",
     "optimagic.optimization.check_arguments",
     "optimagic.optimization.convergence_report",
-    "optimagic.optimization.cyipopt_optimizers",
     "optimagic.optimization.error_penalty",
-    "optimagic.optimization.fides_optimizers",
     "optimagic.optimization.get_algorithm",
     "optimagic.optimization.history_tools",
     "optimagic.optimization.internal_criterion_template",
-    "optimagic.optimization.nag_optimizers",
-    "optimagic.optimization.neldermead",
-    "optimagic.optimization.nlopt_optimizers",
     "optimagic.optimization.optimization_logging",
     "optimagic.optimization.optimize_result",
     "optimagic.optimization.optimize",
-    "optimagic.optimization.pounders_auxiliary",
-    "optimagic.optimization.pounders_history",
-    "optimagic.optimization.pounders",
     "optimagic.optimization.process_multistart_sample",
     "optimagic.optimization.process_results",
-    "optimagic.optimization.pygmo_optimizers",
-    "optimagic.optimization.scipy_optimizers",
-    "optimagic.optimization.tao_optimizers",
     "optimagic.optimization.tiktak",
-    "optimagic.optimization.tranquilo",
+
+    "optimagic.optimizers._pounders",
+    "optimagic.optimizers._pounders.pounders_auxiliary",
+    "optimagic.optimizers._pounders.pounders_history",
+    "optimagic.optimizers._pounders._conjugate_gradient",
+    "optimagic.optimizers._pounders._steihaug_toint",
+    "optimagic.optimizers._pounders._trsbox",
+    "optimagic.optimizers._pounders.bntr",
+    "optimagic.optimizers._pounders.gqtpar",
+    "optimagic.optimizers._pounders.linear_subsolvers",
+
+    "optimagic.optimizers",
+    "optimagic.optimizers.tranquilo",
+    "optimagic.optimizers.pygmo_optimizers",
+    "optimagic.optimizers.scipy_optimizers",
+    "optimagic.optimizers.nag_optimizers",
+    "optimagic.optimizers.neldermead",
+    "optimagic.optimizers.nlopt_optimizers",
+    "optimagic.optimizers.bhhh",
+    "optimagic.optimizers.ipopt",
+    "optimagic.optimizers.fides",
+    "optimagic.optimizers.pounders",
+    "optimagic.optimizers.tao_optimizers",
+
 
     "optimagic.parameters",
     "optimagic.parameters.block_trees",
@@ -216,11 +203,11 @@ module = [
     "optimagic.parameters.tree_conversion",
     "optimagic.parameters.tree_registry",
 
-    "estimagic.sensitivity",
-    "estimagic.sensitivity.msm_sensitivity",
 
     "optimagic.shared",
     "optimagic.shared.check_option_dicts",
+    "optimagic.shared.compat",
+    "optimagic.shared.process_user_function",
 
     "optimagic.visualization",
     "optimagic.visualization.convergence_plot",
@@ -229,20 +216,32 @@ module = [
     "optimagic.visualization.plotting_utilities",
     "optimagic.visualization.profile_plot",
     "optimagic.visualization.slice_plot",
-    "estimagic.visualization",
-    "estimagic.visualization.estimation_table",
-    "estimagic.visualization.lollipop_plot",
 
     "optimagic",
     "optimagic.batch_evaluators",
     "optimagic.cli",
-    "optimagic.compat",
     "optimagic.decorators",
     "optimagic.exceptions",
-    "optimagic.process_user_function",
     "optimagic.utilities",
 
     "estimagic",
+    "estimagic.examples",
+    "estimagic.examples.logit",
+    "estimagic.estimate_ml",
+    "estimagic.estimate_msm",
+    "estimagic.estimation_summaries",
+    "estimagic.msm_weighting",
+    "estimagic.bootstrap_ci",
+    "estimagic.bootstrap_helpers",
+    "estimagic.bootstrap_outcomes",
+    "estimagic.bootstrap_samples",
+    "estimagic.bootstrap",
+    "estimagic.ml_covs",
+    "estimagic.msm_covs",
+    "estimagic.shared_covs",
+    "estimagic.msm_sensitivity",
+    "estimagic.estimation_table",
+    "estimagic.lollipop_plot",
 ]
 check_untyped_defs = false
 disallow_any_generics = false