convert multiple-sequence-alignments to character-state intersection graphs
This code converts a multiple alignments, given in fasta format (one line per species) to the corresponding character-state intersection graph.
build requirements: cmake boost gcc
runtime requirements: boost
- cmake . optionally, compile with debug support: cmake -DDEBUG=x where x is the debug level (0 ... 5, where 0 means no debugging output)
install: make install
usage: ma_to_cc [output-file] see also ma_to_cc --help