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github_url:https://github.com/PATRIC3/p3_docs/blob/master/docroot/tutorial/index.rst

Website Tutorials

Genomics

.. toctree::
   :maxdepth: 1

   genome_assembly/assembly.md
   genome_annotation/annotation.md
   genome_quality_report/genome_quality_report
   comprehensive-genome-analysis/comprehensive-genome-analysis.md
   private_genome/private_genome.md
   blast/blast.md
   similar_genome_finder/similar_genome_finder.md
   variation_analysis_service/variation_analysis_service.md
   tn-seq/tn-seq.md
   phylogenetic_tree_building/tree_building.md
   metagenomic_binning/metagenomic_binning
   metagenomic_binning/metagenomic_output


Transcriptomics

.. toctree::
   :maxdepth: 1

   expression_import/expression_import.md
   rna_seq_submission/submitting_rna_seq_job.md
   examining_transcriptomics_data/examining_transcriptomics_data.md


Protein Tools

.. toctree::
   :maxdepth: 1

   protein_family_sorter/protein_family_sorter.md
   proteome_comparison/proteome_comparison.md
   excel_formatting/excel_formatting.md


Metabolomics

.. toctree::
   :maxdepth: 1

   comparative_pathways/comparative_pathways.md
   metabolic_model_reconstruction/metabolic_model_reconstruction.md

Others

.. toctree::
   :maxdepth: 1

   genome_quality_report/genome_quality_report.md
   genome_groups/creating_genome_groups.md
   amr/amr.md
   binning_overview
   dev_at_argonne
   enabling_flash/enabling_flash
   sharing_data_in_the_workplace/sharing_data_in_the_workplace.md
   sharing-a-private-genome-in-patric.md