From 3219a3931ecd19f2a51fd8347290b370b9cfb8c6 Mon Sep 17 00:00:00 2001 From: alchemistmatt Date: Wed, 25 Jul 2018 17:08:03 -0700 Subject: [PATCH] Add an example Log file --- .../LogExamples/rcmdlog_CannotConnect.txt | 32 +++++++++++++++++++ 1 file changed, 32 insertions(+) create mode 100644 Documentation/LogExamples/rcmdlog_CannotConnect.txt diff --git a/Documentation/LogExamples/rcmdlog_CannotConnect.txt b/Documentation/LogExamples/rcmdlog_CannotConnect.txt new file mode 100644 index 0000000..2464369 --- /dev/null +++ b/Documentation/LogExamples/rcmdlog_CannotConnect.txt @@ -0,0 +1,32 @@ +#------------------------------- +# Starting Inferno [6.6.18 08:57:20]... +#------------------------------- +# Done reading configuration parameters. +#------------------------------- +# Done setting folders. +#------------------------------- +# Error: Connection to R failed. +#------------------------------- +# Done Connecting to R. +# EvaluateNoReturn ERROR load("C:/Program Files (x86)/InfernoRDN/Inferno.RData") -> Could not connect to R +#------------------------------- +# Error: Sourcing R functions failed. +#------------------------------- +# Done sourcing R functions. +# EvaluateNoReturn ERROR load("C:/Program Files (x86)/InfernoRDN/Inferno_stdplots.RData") -> Could not connect to R +#------------------------------- +# Error: Sourcing R plotting functions failed. +#------------------------------- +# Done sourcing R plotting functions. +# EvaluateNoReturn ERROR verOK <- RVersionOK(major=2,minor=8.0) -> Could not connect to R +#------------------------------- +# Error: R version incompatible. +# EvaluateNoReturn ERROR installPackages(c('gplots','ellipse','plotrix','car','outliers','fpc','pls','scatterplot3d','MASS','impute','colorspace','nlme','qvalue','e1071','Hmisc','amap','Cairo','ggplot2','class'), repository="http://cran.fhcrc.org/") -> Could not connect to R +#------------------------------- +# Exception in InstallRequiredRPackages while installing default packages from http://cran.fhcrc.org/: Could not connect to R +#------------------------------- +# Error: Loading required R packages failed. +#------------------------------- +# Done loading required R packages. +#------------------------------- +# Inferno started.