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File MzidToTsvConverter.zip has MzidToTsvConverter.exe for both .NET 4.5 and for .NET 4.6.2 (and above).

  • See the Readme file for usage information

On Linux, use Mono to run the program, for example mono MzidToTsvConverter.exe

Changes

  • Now creates the parent directory of the output .tsv file, if missing
  • The -tsv switch now supports both file and directory paths
Assets 3

@FarmGeek4Life FarmGeek4Life released this Jun 7, 2019 · 7 commits to master since this release

  • Fix a bug with that was especially noticeable with -singleResult, seen with files with the spectrumID format "index=[number]" that did not also have a "scan numbers(s)" CV Param.
  • Other minor updates (code improvements with no effect on the output)
Assets 3

@FarmGeek4Life FarmGeek4Life released this Apr 16, 2019 · 14 commits to master since this release

  • Change the method used for outputting the tsv file. The new method more easily supports adding/removing fields based on user options
  • Add 'ScanTime(Min)' as a new column by default. Output that matches previous versions can be made using the -ne or -noExtended command-line flag.
Assets 3

@alchemistmatt alchemistmatt released this Nov 16, 2018 · 20 commits to master since this release

Adds the option to filter on SpecEValue, EValue, and/or QValue when creating the TSV file.

Assets 3

@alchemistmatt alchemistmatt released this Nov 14, 2018 · 23 commits to master since this release

Includes an updated Readme file and updated DLLs

Assets 3

@FarmGeek4Life FarmGeek4Life released this Jul 10, 2018 · 35 commits to master since this release

Allow converting of all mzid files in a directory without needing to use wildcards with a single command

Assets 3

@FarmGeek4Life FarmGeek4Life released this Mar 27, 2018 · 37 commits to master since this release

When parsing the MZID file: Add exception handling for duplicate ID issues, and show better messages; also add option to ignore duplicate IDs

Assets 3

@FarmGeek4Life FarmGeek4Life released this Jan 31, 2018 · 38 commits to master since this release

Change project format to support compiling as .Net 4.5, .Net 4.6.2, and .Net core 2.0
Update number formatting in the output
Reduce memory usage when converting by reading SpectrumIdentificationResults just before writing them, rather than reading the entire mzid file and holding it in memory.

Assets 3

@FarmGeek4Life FarmGeek4Life released this Jul 4, 2017 · 49 commits to master since this release

Stable version

Works on Mono.

Fixes bug where it output instrument scan number rather than scan index for MGF and ms2 files

Assets 3
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