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&lt;!--
.. title: R Packages Warnings and Messages when Loading
.. slug: package_loading_warnings_and_errors
.. tags: R, error messages
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&lt;div id="warning-the-following-objects-are-masked" class="section level2"&gt;
&lt;h3&gt;Warning the following objects are masked&lt;/h3&gt;
&lt;p&gt;If you load the &lt;strong&gt;plyr&lt;/strong&gt; and &lt;strong&gt;dplyr&lt;/strong&gt; packages you will get several messages about objects being “masked”.&lt;/p&gt;
&lt;pre class="r"&gt;&lt;code&gt;library("plyr")&lt;/code&gt;&lt;/pre&gt;
&lt;pre&gt;&lt;code&gt;## -------------------------------------------------------------------------
## You have loaded plyr after dplyr - this is likely to cause problems.
## If you need functions from both plyr and dplyr, please load plyr first, then dplyr:
## library(plyr); library(dplyr)
## -------------------------------------------------------------------------
##
## Attaching package: 'plyr'
&lt;pre class="r"&gt;&lt;code&gt;library("plyr")
library("dplyr")&lt;/code&gt;&lt;/pre&gt;
&lt;pre&gt;&lt;code&gt;##
## Attaching package: 'dplyr'
##
## The following objects are masked from 'package:dplyr':
## The following objects are masked from 'package:plyr':
##
## arrange, count, desc, failwith, id, mutate, rename, summarise,
## summarize&lt;/code&gt;&lt;/pre&gt;
&lt;pre class="r"&gt;&lt;code&gt;library("dplyr")&lt;/code&gt;&lt;/pre&gt;
## summarize
##
## The following object is masked from 'package:stats':
##
## filter
##
## The following objects are masked from 'package:base':
##
## intersect, setdiff, setequal, union&lt;/code&gt;&lt;/pre&gt;
&lt;p&gt;This means that the new package has object (usually functions) with names that are the same as those of earlier loaded packages. In the above example, after loading &lt;strong&gt;dplyr&lt;/strong&gt;, typing &lt;code&gt;filter&lt;/code&gt; will use the function from the &lt;strong&gt;dplyr&lt;/strong&gt; package and not the &lt;strong&gt;base&lt;/strong&gt; (which is one of R’s built-in packages) package. If you need to use the &lt;code&gt;filter&lt;/code&gt; function in base R, you can refer to it explicitly with &lt;code&gt;::&lt;/code&gt;. For example, &lt;code&gt;base::filter&lt;/code&gt; will always use the function from the &lt;strong&gt;base&lt;/strong&gt; package; and &lt;code&gt;dplyr::filter&lt;/code&gt; will always use the function from the &lt;strong&gt;dplyr&lt;/strong&gt; package. Note that you can refer to functions in packages using &lt;code&gt;::&lt;/code&gt; without first loading the package using &lt;code&gt;library()&lt;/code&gt;. This can sometimes be useful if you want to use a function from a package, but don’t want to load the entire package.&lt;/p&gt;
&lt;/div&gt;
&lt;div id="package-startup-messages" class="section level2"&gt;
Expand All @@ -52,4 +75,28 @@ library("dplyr")
--&gt;


&lt;/div&gt;&lt;/div&gt;</description><category>error messages</category><category>R</category><guid>http://pols503.github.io/pols_503_sp15/package_loading_warnings_and_errors.html</guid><pubDate>Mon, 20 Apr 2015 20:18:00 GMT</pubDate></item></channel></rss>
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