December 2019

In this release, a number of papers were reviewed for previously used filters that were too stringent and find additional variant tables that were missed, or variants that should have been excluded from the database. A few corrections were applied and a number of new papers have been added, bringing the total count to 69.

Papers that were added or updated now have the following counts:

Counts in the current release that were updated or changed.

< ./varicarta_2019-12-11_03-43-38.tsv.tsv
<       6 Wen2017
<       6 vanBon2015 *
<       7 Du2018
<      10 Yamamoto2019
<      18 Chan2019
<      18 Zhou2019
<      27 Torti2019
<      33 Long2019
<      43 Turner2017
<      71 Doan2019
<      79 Zhao2019
<     128 Chen2017
<     131 Callaghan2019
<     145 Patowary2019
<     339 Werling2018
<     518 Cukier2014 *
<     634 Michaelson2012 *
<     736 Feliciano2019
<    1728 Guo2018
<    2224 Wu2018
<    3891 Turner2016 * 
<    6209 Ruzzo2019
<    6969 Leblond2019
<   11118 Yuen2016 *
<   12165 Satterstrom2018
<  140521 Yuen2017 *

* Updated from previous release, otherwise paper is new.

Counts from previous release that were updated.

> ./varicarta_2019-04-29_11-30-01.tsv
>      11 vanBon2015 # Excluded 5 variants.
>     502 Cukier2014 # Added 16 missing variants.
>     668 Michaelson2012 # Excluded 34 variants.
>    2367 Yuen2017 # Added ~138k missing variants.
>    4049 Turner2016  # Excluded ~150+  variants.
>    4858 Kong2012 # Paper excluded; unable to retrieve sample ID and disambiguate subjects.
>   11126 Yuen2016 # Excluded 8 variants.

v0.1-preprint

Data from the BioRxiv pre-print.

Data generated on 29/04/2019.

• export_latest.tsv: The full exported database.
• all_notes.zip: Curation notes.