R code for paper: Hickey, P. F. and Bahlo, M. X chromosome association testing in genome wide association studies. Genet Epidemiol. 2011 Nov;35(7):664-70. doi: 10.1002/gepi.20616. Epub 2011 Aug 4
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README.md
example_parameters.txt
example_results.txt
example_simulation.r
functions.R

README.md

XGWAS

R code for paper: Hickey, P. F. and Bahlo, M. X chromosome association testing in genome wide association studies. Genet Epidemiol. 2011 Nov;35(7):664-70. doi: 10.1002/gepi.20616. Epub 2011 Aug 4.

This code will allow the user to reproduce the simulations performed in the aforementioned paper. It also allows the user to specify their own simulation parameters and use the provided functions to simulate data and analyse the results.

Please see example_simulation.r for an example of how to use this code.

This software is licensed under the MIT license.