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  • Python MIT 0 0 0 0 Updated Jun 14, 2019
  • MEDDOCAN-CODALAB-Evaluation-Script

    COBALAB version of the original evaluation script for the MEDDOCAN task.

    Python MIT 2 0 0 0 Updated May 20, 2019
  • EHR-normalizer

    [PlanTL/medicine/document/NLP preprocessing] Software to convert PDF files into HTML, TXT or XML files and to normalize EHRs.

    Perl MIT 0 0 0 0 Updated May 6, 2019
  • utils

    Miscellaneous utilities and scripts.

    Java 0 0 0 0 Updated May 6, 2019
  • Embeddings

    [PlanTL/medicine/word embeddings] Word embeddings generated from Spanish corpora.

    1 1 1 0 Updated May 3, 2019
  • 0 0 0 0 Updated May 2, 2019
  • 0 0 0 0 Updated Apr 11, 2019
  • SPACCC_POS-TAGGER

    [PlanTL/medicine/document annotation/NLP preprocessing/part-of-speech] Part-of-Speech Tagger for medical domain corpus in Spanish based on FreeLing.

    Python 1 0 0 0 Updated Apr 2, 2019
  • MEDDOCAN-Evaluation-Script

    Official evaluation script of the Medical Document Anonymization (MEDDOCAN) task.

    Python MIT 0 0 0 0 Updated Mar 28, 2019
  • Python MIT 1 1 0 0 Updated Mar 28, 2019
  • MEDDOCAN-Format-Converter-Script

    Script to convert files between MEDDOCAN-Brat, MEDDOCAN-XML, and i2b2 formats.

    Python MIT 0 0 0 0 Updated Mar 26, 2019
  • SPACCC_PHI

    [PlanTL/medicine/annotated corpus/guidelines/anonimization] protected health information annotations in the Spanish Clinical Case Corpus.

    0 0 0 0 Updated Mar 25, 2019
  • SPACCC_Sentence-Splitter

    [PlanTL/medicine/document annotation/NLP preprocessing/sentence splitter] Sentence splitting model created using the Apache OpenNLP machine learning toolkit

    Java 0 0 0 0 Updated Mar 7, 2019
  • SPACCC_Tokenizer

    [PlanTL/medicine/document annotation/NLP preprocessing/tokenization] Tokenization model created using the Apache OpenNLP machine learning toolkit.

    Java 0 0 0 0 Updated Mar 7, 2019
  • TENTE

    [PlanTL/medicine/terminological resource retrieval] A medical negated terms extraction tool.

    Java MIT 0 0 0 0 Updated Mar 5, 2019
  • NegEx-MES

    [PlanTL/medicine/document annotation/negation] Negation detector for Spanish clinical texts based on Wendy Chapman's NegEx algorithm.

    Java 0 0 0 0 Updated Mar 5, 2019
  • AbreMES-DB

    [Plan TL/medicine/lexical/terminological resource] A Spanish Medical Abbreviation DataBase.

    0 1 0 0 Updated Mar 5, 2019
  • AbreMES-X

    [PlanTL/medicine/semantic annotation] Software used to generate the Spanish Medical Abbreviation DataBase (AbreMES-DB).

    Java MIT 0 0 0 0 Updated Mar 5, 2019
  • CUTEXT

    [PlanTL/medicine/terminological resource retrieval] A multilingual medical term extraction tool.

    Java MIT 0 1 0 0 Updated Feb 12, 2019
  • EHR-TTS

    [PlanTL/medicine/document annotation//time] HeidelTime grammar for temporal tagging of Spanish Electronic Health Records (EHR).

    GPL-3.0 0 0 0 0 Updated Feb 8, 2019
  • SPACCC_POS

    [PlanTL/medicine/annotated corpus/guidelines/Part-of-Speech] Part-of-Speech annotations in the Spanish Clinical Case Corpus.

    Python 0 0 0 0 Updated Feb 8, 2019
  • SPACCC_TOKEN

    [PlanTL/medicine/annotated corpus/guidelines/tokenization] Tokenization annotations in the Spanish Clinical Case Corpus

    Python 0 1 0 0 Updated Feb 8, 2019
  • SPACCC_SPLIT

    [PlanTL/medicine/annotated corpus/guidelines/sentence splitting] Sentence splitting annotations in the Spanish Clinical Case Corpus.

    Python 0 0 0 0 Updated Feb 8, 2019
  • SPACCC

    [PlanTL/medicine/document] Spanish Clinical Case Corpus

    0 0 0 0 Updated Feb 8, 2019
  • SPACCC_CheNE

    [PlanTL/medicine/annotated corpus/guidelines/named entities] Annotations of chemical mentions, drugs and biosimilars with therapeutic relevance in clinical reports in the Spanish Clinical Case Corpus.

    0 0 0 0 Updated Feb 8, 2019
  • PHI-masker

    [PlanTL/medicine/annotated corpus/anonimization] This software masks Protected Health Information (PHI) in documents that have been previously annotated with Brat.

    Python MIT 0 0 0 0 Updated Feb 8, 2019
  • SciELO-Spain-Crawler

    [PlanTL/medicine/dataset generation/retrieval] Crawler to download all the publications written in Spanish from the Spanish SciELO server.

    Java MIT 0 0 0 0 Updated Jan 16, 2019
  • Medical-Translator

    [PlanTL/medicine/neural machine translation/translation models] Files needed to use the Neural Machine Translation system for the Biomedical Domain.

    Shell 1 0 0 0 Updated Jan 10, 2019
  • MeSpEn_Glossaries

    [PlanTL/medicine/lexical/terminological resource] Bilingual medical glossaries for various language pairs.

    0 1 0 0 Updated Dec 11, 2018
  • SPACCC_NE

    [PlanTL/medicine/annotated corpus/guidelines/named entities] Medical concept and named entity annotations in the Spanish Clinical Case Corpus.

    0 0 0 0 Updated Nov 26, 2018

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