An ontology containing plant stresses; biotic and abiotic. Part of the Planteome suite of reference ontologies.
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imports
src
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.travis.yml
README.md
oops.obo
oops.owl

README.md

Build Status DOI

ontology-of-plant-stress

This ontology contains stresses that a plant encounters, both biotic and abiotic.

Versions

Stable release versions

The latest version of the ontology can always be found at:

http://purl.obolibrary.org/obo/oops.owl

(note this will not show up until the request has been approved by obofoundry.org)

Editors' version

Editors of this ontology should use the edit version, src/ontology/oops-edit.owl

Contact

Please use this GitHub repository's Issue tracker to request new terms/classes or report errors or specific concerns related to the ontology.

Run pattern apply ---> direct into 'ontology-of-plant-stress.owl'

change Makefile to use 'ontology-of-plant-stress.owl' as the input.

output of >make should be: oops.owl, oops.obo

cat ontology-of-plant-stress.owl | grep Class:\ NCBITaxon #this returns all the NCBI taxon IDs that are in the .owl file #copy paste these into the NCBITaxon_imports.txt and add the root http://purl.obolibrary.org/obo/