Repository for the Plant Ontology
Makefile Perl
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Failed to load latest commit information.
imports made all_imports Dec 19, 2016
mapping2po updated FNA to PO mapping and corrected incorrect dbxrefs Jun 29, 2013
po-release-#21-Oct-2015 Updated the README files Oct 13, 2016
scripts-etc Added script to parse OBO file and output tab delimited file Aug 27, 2015
subsets
.gitignore added RO labels Oct 20, 2016
.travis.yml Update .travis.yml Aug 31, 2016
Makefile added ro import Oct 20, 2016
README-po-editors.md Update README-po-editors.md Jan 6, 2017
README.md
catalog-v001.xml
plant-ontology-dev.txt Automatic commit of the tab delimited version of plant-ontology.obo. … Jul 7, 2018
plant-ontology.obo
plant-ontology.obo.owl Automatic commit of the OWL version of the plant-ontology.obo file. C… Jun 5, 2018
plant-ontology.txt
po.obo fixing the tag again Aug 14, 2018
po.owl fixing the tag again Aug 14, 2018

README.md

Build Status DOI

plant-ontology

This is the repository for the Plant Ontology

The current release version of the PO can be accessed through its official PURLs:

Or at http://planteome.org/

All releases can be found here: https://github.com/Planteome/plant-ontology/releases

Files in this repository:

  • plant-ontology.obo: The editor's version of the Plant Ontology, in OBO format. Contains all relations. Relations that are inferred are not asserted

Note that this file is subject to frequent changes, and may contain terms that will later destroyed (permanently deleted from the ontology, rather than made obsolete). Users should use this file with caution.

  • plant-ontology-dev.txt

A text version of the plant-ontology.obo editors' file, automatically created nightly

  • plant-ontology.obo.owl

An OWL version of the plant-ontology.obo editors' file, automatically created nightly

New versions of the following two files are created only with new releases:

  • po.obo

The current Release file of the Plant Ontology, in OBO format. All relations that are inferred are asserted in the release process

  • po.owl

The current release file of the Plant Ontology, in OWL format. All relations that are inferred are asserted in the release process

  • po-basic.obo

The current Release file of the Plant Ontology, in OBO format, with only the is_a and part_of relations.

Ontology Editors Guide

See https://github.com/Planteome/plant-ontology/blob/master/README-po-editors.md