Apache Maven 3.6.0 Maven home: /usr/share/maven Java version: 11.0.13, vendor: Ubuntu, runtime: /usr/lib/jvm/java-11-openjdk-amd64 Default locale: en_US, platform encoding: UTF-8 OS name: "linux", version: "5.4.0-74-generic", arch: "amd64", family: "unix" [DEBUG] Created new class realm maven.api [DEBUG] Importing foreign packages into class realm maven.api [DEBUG] Imported: javax.annotation.* < plexus.core [DEBUG] Imported: javax.annotation.security.* < plexus.core [DEBUG] Imported: javax.enterprise.inject.* < plexus.core [DEBUG] Imported: javax.enterprise.util.* < plexus.core [DEBUG] Imported: javax.inject.* < plexus.core [DEBUG] Imported: org.apache.maven.* < plexus.core [DEBUG] Imported: org.apache.maven.artifact < plexus.core [DEBUG] Imported: org.apache.maven.classrealm < plexus.core [DEBUG] Imported: org.apache.maven.cli < plexus.core [DEBUG] Imported: org.apache.maven.configuration < plexus.core [DEBUG] Imported: org.apache.maven.exception < plexus.core [DEBUG] Imported: org.apache.maven.execution < plexus.core [DEBUG] Imported: org.apache.maven.execution.scope < plexus.core [DEBUG] Imported: org.apache.maven.lifecycle < plexus.core [DEBUG] Imported: org.apache.maven.model < plexus.core [DEBUG] Imported: org.apache.maven.monitor < plexus.core [DEBUG] Imported: org.apache.maven.plugin < plexus.core [DEBUG] Imported: org.apache.maven.profiles < plexus.core [DEBUG] Imported: org.apache.maven.project < plexus.core [DEBUG] Imported: org.apache.maven.reporting < plexus.core [DEBUG] Imported: org.apache.maven.repository < plexus.core [DEBUG] Imported: org.apache.maven.rtinfo < plexus.core [DEBUG] Imported: org.apache.maven.settings < plexus.core [DEBUG] Imported: org.apache.maven.toolchain < plexus.core [DEBUG] Imported: org.apache.maven.usability < plexus.core [DEBUG] Imported: org.apache.maven.wagon.* < plexus.core [DEBUG] Imported: org.apache.maven.wagon.authentication < plexus.core [DEBUG] Imported: org.apache.maven.wagon.authorization < plexus.core [DEBUG] Imported: org.apache.maven.wagon.events < plexus.core [DEBUG] Imported: org.apache.maven.wagon.observers < plexus.core [DEBUG] Imported: org.apache.maven.wagon.proxy < plexus.core [DEBUG] Imported: org.apache.maven.wagon.repository < plexus.core [DEBUG] Imported: org.apache.maven.wagon.resource < plexus.core [DEBUG] Imported: org.codehaus.classworlds < plexus.core [DEBUG] Imported: org.codehaus.plexus.* < plexus.core [DEBUG] Imported: org.codehaus.plexus.classworlds < plexus.core [DEBUG] Imported: org.codehaus.plexus.component < plexus.core [DEBUG] Imported: org.codehaus.plexus.configuration < plexus.core [DEBUG] Imported: org.codehaus.plexus.container < plexus.core [DEBUG] Imported: org.codehaus.plexus.context < plexus.core [DEBUG] Imported: org.codehaus.plexus.lifecycle < plexus.core [DEBUG] Imported: org.codehaus.plexus.logging < plexus.core [DEBUG] Imported: org.codehaus.plexus.personality < plexus.core [DEBUG] Imported: org.codehaus.plexus.util.xml.Xpp3Dom < plexus.core [DEBUG] Imported: org.codehaus.plexus.util.xml.pull.XmlPullParser < plexus.core [DEBUG] Imported: org.codehaus.plexus.util.xml.pull.XmlPullParserException < plexus.core [DEBUG] Imported: org.codehaus.plexus.util.xml.pull.XmlSerializer < plexus.core [DEBUG] Imported: org.eclipse.aether.* < plexus.core [DEBUG] Imported: org.eclipse.aether.artifact < plexus.core [DEBUG] Imported: org.eclipse.aether.collection < plexus.core [DEBUG] Imported: org.eclipse.aether.deployment < plexus.core [DEBUG] Imported: org.eclipse.aether.graph < plexus.core [DEBUG] Imported: org.eclipse.aether.impl < plexus.core [DEBUG] Imported: org.eclipse.aether.installation < plexus.core [DEBUG] Imported: org.eclipse.aether.internal.impl < plexus.core [DEBUG] Imported: org.eclipse.aether.metadata < plexus.core [DEBUG] Imported: org.eclipse.aether.repository < plexus.core [DEBUG] Imported: org.eclipse.aether.resolution < plexus.core [DEBUG] Imported: org.eclipse.aether.spi < plexus.core [DEBUG] Imported: org.eclipse.aether.transfer < plexus.core [DEBUG] Imported: org.eclipse.aether.version < plexus.core [DEBUG] Imported: org.fusesource.jansi.* < plexus.core [DEBUG] Imported: org.slf4j.* < plexus.core [DEBUG] Imported: org.slf4j.helpers.* < plexus.core [DEBUG] Imported: org.slf4j.spi.* < plexus.core [DEBUG] Populating class realm maven.api [INFO] Error stacktraces are turned on. [DEBUG] Message scheme: color [DEBUG] Message styles: debug info warning error success failure strong mojo project [DEBUG] Reading global settings from /usr/share/maven/conf/settings.xml [DEBUG] Reading user settings from /home/dps/.m2/settings.xml [DEBUG] Reading global toolchains from /usr/share/maven/conf/toolchains.xml [DEBUG] Reading user toolchains from /home/dps/.m2/toolchains.xml [DEBUG] Using local repository at /home/dps/.m2/repository [DEBUG] Using manager EnhancedLocalRepositoryManager with priority 10.0 for /home/dps/.m2/repository [INFO] Scanning for projects... [DEBUG] Dependency collection stats: {ConflictMarker.analyzeTime=721237, ConflictMarker.markTime=168951, ConflictMarker.nodeCount=17, ConflictIdSorter.graphTime=375015, ConflictIdSorter.topsortTime=311480, ConflictIdSorter.conflictIdCount=13, ConflictIdSorter.conflictIdCycleCount=0, ConflictResolver.totalTime=3386882, ConflictResolver.conflictItemCount=16, DefaultDependencyCollector.collectTime=92632996, DefaultDependencyCollector.transformTime=6682960} [DEBUG] org.apache.maven.wagon:wagon-webdav-jackrabbit:jar:1.0: [DEBUG] org.apache.maven.wagon:wagon-http-shared:jar:1.0:compile [DEBUG] commons-httpclient:commons-httpclient:jar:3.1:compile [DEBUG] commons-codec:commons-codec:jar:1.2:compile [DEBUG] commons-logging:commons-logging:jar:1.1.1:compile [DEBUG] commons-io:commons-io:jar:2.0.1:compile [DEBUG] org.jsoup:jsoup:jar:1.6.1:compile [DEBUG] org.apache.jackrabbit:jackrabbit-webdav:jar:1.5.0:compile [DEBUG] org.apache.jackrabbit:jackrabbit-jcr-commons:jar:1.5.0:compile [DEBUG] org.slf4j:slf4j-api:jar:1.5.3:compile [DEBUG] org.slf4j:slf4j-nop:jar:1.5.3:runtime [DEBUG] org.apache.maven.wagon:wagon-provider-api:jar:1.0:compile [DEBUG] org.codehaus.plexus:plexus-utils:jar:1.4.2:compile [DEBUG] Created new class realm extension>org.apache.maven.wagon:wagon-webdav-jackrabbit:1.0 [DEBUG] Importing foreign packages into class realm extension>org.apache.maven.wagon:wagon-webdav-jackrabbit:1.0 [DEBUG] Imported: < maven.api [DEBUG] Populating class realm extension>org.apache.maven.wagon:wagon-webdav-jackrabbit:1.0 [DEBUG] Included: org.apache.maven.wagon:wagon-webdav-jackrabbit:jar:1.0 [DEBUG] Included: org.apache.maven.wagon:wagon-http-shared:jar:1.0 [DEBUG] Included: commons-httpclient:commons-httpclient:jar:3.1 [DEBUG] Included: commons-codec:commons-codec:jar:1.2 [DEBUG] Included: commons-logging:commons-logging:jar:1.1.1 [DEBUG] Included: commons-io:commons-io:jar:2.0.1 [DEBUG] Included: org.jsoup:jsoup:jar:1.6.1 [DEBUG] Included: org.apache.jackrabbit:jackrabbit-webdav:jar:1.5.0 [DEBUG] Included: org.apache.jackrabbit:jackrabbit-jcr-commons:jar:1.5.0 [DEBUG] Included: org.slf4j:slf4j-nop:jar:1.5.3 [DEBUG] Included: org.codehaus.plexus:plexus-utils:jar:1.4.2 [DEBUG] Extension realms for project net.preibisch:BigStitcher-Spark:jar:0.0.1-SNAPSHOT: [ClassRealm[extension>org.apache.maven.wagon:wagon-webdav-jackrabbit:1.0, parent: jdk.internal.loader.ClassLoaders$AppClassLoader@55054057]] [DEBUG] Created new class realm project>net.preibisch:BigStitcher-Spark:0.0.1-SNAPSHOT [DEBUG] Populating class realm project>net.preibisch:BigStitcher-Spark:0.0.1-SNAPSHOT [DEBUG] Looking up lifecycle mappings for packaging jar from ClassRealm[project>net.preibisch:BigStitcher-Spark:0.0.1-SNAPSHOT, parent: ClassRealm[maven.api, parent: null]] [DEBUG] Extension realms for project org.scijava:pom-scijava:pom:30.0.0: [ClassRealm[extension>org.apache.maven.wagon:wagon-webdav-jackrabbit:1.0, parent: jdk.internal.loader.ClassLoaders$AppClassLoader@55054057]] [DEBUG] Looking up lifecycle mappings for packaging pom from ClassRealm[project>net.preibisch:BigStitcher-Spark:0.0.1-SNAPSHOT, parent: ClassRealm[maven.api, parent: null]] [DEBUG] Extension realms for project org.scijava:pom-scijava-base:pom:12.0.0: [ClassRealm[extension>org.apache.maven.wagon:wagon-webdav-jackrabbit:1.0, parent: jdk.internal.loader.ClassLoaders$AppClassLoader@55054057]] [DEBUG] Looking up lifecycle mappings for packaging pom from ClassRealm[project>net.preibisch:BigStitcher-Spark:0.0.1-SNAPSHOT, parent: ClassRealm[maven.api, parent: null]] [DEBUG] === REACTOR BUILD PLAN ================================================ [DEBUG] Project: net.preibisch:BigStitcher-Spark:jar:0.0.1-SNAPSHOT [DEBUG] Tasks: [clean, package] [DEBUG] Style: Regular [DEBUG] ======================================================================= [INFO] [INFO] ------------------< net.preibisch:BigStitcher-Spark >------------------- [INFO] Building BigStitcher Spark 0.0.1-SNAPSHOT [INFO] --------------------------------[ jar ]--------------------------------- [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] Lifecycle default -> [validate, initialize, generate-sources, process-sources, generate-resources, process-resources, compile, process-classes, generate-test-sources, process-test-sources, generate-test-resources, process-test-resources, test-compile, process-test-classes, test, prepare-package, package, pre-integration-test, integration-test, post-integration-test, verify, install, deploy] [DEBUG] Lifecycle clean -> [pre-clean, clean, post-clean] [DEBUG] Lifecycle site -> [pre-site, site, post-site, site-deploy] [DEBUG] === PROJECT BUILD PLAN ================================================ [DEBUG] Project: net.preibisch:BigStitcher-Spark:0.0.1-SNAPSHOT [DEBUG] Dependencies (collect): [test] [DEBUG] Dependencies (resolve): [compile, runtime, test] [DEBUG] Repositories (dependencies): [imagej.public (https://maven.imagej.net/content/groups/public, default, releases+snapshots), jitpack.io (https://jitpack.io, default, releases+snapshots), central (https://repo.maven.apache.org/maven2, default, releases)] [DEBUG] Repositories (plugins) : [central (https://repo.maven.apache.org/maven2, default, releases)] [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-clean-plugin:3.1.0:clean (default-clean) [DEBUG] Style: Regular [DEBUG] Configuration: ${maven.clean.excludeDefaultDirectories} ${maven.clean.failOnError} ${maven.clean.followSymLinks} ${maven.clean.retryOnError} ${maven.clean.skip} ${maven.clean.verbose} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-enforcer-plugin:3.0.0-M3:enforce (enforce-rules) [DEBUG] Style: Regular [DEBUG] Configuration: ${rules} ${enforcer.fail} ${enforcer.failFast} ${enforcer.ignoreCache} 3.3.9 Plugins need to be versioned! [1.8.0-101,) No Duplicate Classes Allowed! - For duplicate transitive dependencies, add dependency exclusions. - For duplications between direct dependencies, resolve or add ignored classes to this rule's configuration. true com.esotericsoftware.kryo.*,com.esotericsoftware.minlog.*,com.esotericsoftware.reflectasm.*,com.google.inject.*,jnr.ffi.*,org.apache.hadoop.yarn.*.package-info,org.apache.spark.unused.UnusedStubClass,org.hibernate.stat.ConcurrentStatisticsImpl,org.jetbrains.kotlin.daemon.common.*,org.junit.runner.Runner founder,lead,developer,debugger,reviewer,support,maintainer founder,lead,developer,debugger,reviewer,support,maintainer 1.8 com.headius:invokebinder com.sun:tools module-info test name description url inceptionYear organization licenses developers contributors mailingLists scm issueManagement ciManagement properties//license.licenseName properties//license.copyrightOwners org.scijava,net.imagej,net.imglib2,io.scif,sc.fiji ${enforcer.skip} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.codehaus.mojo:build-helper-maven-plugin:3.0.0:regex-property (sanitize-version) [DEBUG] Style: Regular [DEBUG] Configuration: false sanitizedVersion ^([0-9]+)\.([0-9]+)\.([0-9]+).*$ $1.$2.$3 0.0.1-SNAPSHOT [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.codehaus.mojo:build-helper-maven-plugin:3.0.0:regex-property (guess-package) [DEBUG] Style: Regular [DEBUG] Configuration: false package-guess [^a-z0-9_.]+ _ net.preibisch.BigStitcher-Spark [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.codehaus.mojo:buildnumber-maven-plugin:1.4:create (default) [DEBUG] Style: Regular [DEBUG] Configuration: ${maven.buildNumber.buildNumberPropertyName} ${maven.buildNumber.doCheck} ${maven.buildNumber.doUpdate} ${maven.buildNumber.format} true ${maven.buildNumber.locale} ${password} UNKNOWN ${maven.buildNumber.scmBranchPropertyName} ${maven.buildNumber.scmDirectory} ${maven.buildNumber.shortRevisionLength} ${maven.buildNumber.skip} ${maven.buildNumber.timestampFormat} ${maven.buildNumber.timestampPropertyName} ${maven.buildNumber.useLastCommittedRevision} ${username} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.scijava:scijava-maven-plugin:2.0.0:set-rootdir (set-rootdir) [DEBUG] Style: Regular [DEBUG] Configuration: ${setRootdir.rootdirPropertyName} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.jacoco:jacoco-maven-plugin:0.8.6:prepare-agent (jacoco-initialize) [DEBUG] Style: Regular [DEBUG] Configuration:
${jacoco.address}
${jacoco.append} ${jacoco.classDumpDir} ${jacoco.destFile} ${jacoco.dumpOnExit} ${jacoco.exclClassLoaders} ${jacoco.inclBootstrapClasses} ${jacoco.inclNoLocationClasses} ${jacoco.jmx} ${jacoco.output} ${plugin.artifactMap} ${jacoco.port} ${project} ${jacoco.propertyName} ${jacoco.sessionId} ${jacoco.skip} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-resources-plugin:3.1.0:resources (default-resources) [DEBUG] Style: Regular [DEBUG] Configuration: ${maven.resources.skip} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-compiler-plugin:3.8.1:compile (default-compile) [DEBUG] Style: Regular [DEBUG] Configuration: ${maven.compiler.compilerId} ${maven.compiler.compilerReuseStrategy} ${maven.compiler.compilerVersion} ${maven.compiler.debug} ${maven.compiler.debuglevel} ${encoding} ${maven.compiler.executable} ${maven.compiler.failOnError} ${maven.compiler.failOnWarning} ${maven.compiler.forceJavacCompilerUse} ${maven.compiler.fork} ${maven.compiler.maxmem} ${maven.compiler.meminitial} ${maven.compiler.optimize} ${maven.compiler.parameters} ${maven.compiler.release} ${maven.compiler.showDeprecation} ${maven.compiler.showWarnings} ${maven.main.skip} ${maven.compiler.skipMultiThreadWarning} ${maven.compiler.source} ${lastModGranularityMs} ${maven.compiler.target} ${maven.compiler.useIncrementalCompilation} ${maven.compiler.verbose} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-resources-plugin:3.1.0:testResources (default-testResources) [DEBUG] Style: Regular [DEBUG] Configuration: ${maven.test.skip} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-compiler-plugin:3.8.1:testCompile (default-testCompile) [DEBUG] Style: Regular [DEBUG] Configuration: ${maven.compiler.compilerId} ${maven.compiler.compilerReuseStrategy} ${maven.compiler.compilerVersion} ${maven.compiler.debug} ${maven.compiler.debuglevel} ${encoding} ${maven.compiler.executable} ${maven.compiler.failOnError} ${maven.compiler.failOnWarning} ${maven.compiler.forceJavacCompilerUse} ${maven.compiler.fork} ${maven.compiler.maxmem} ${maven.compiler.meminitial} ${maven.compiler.optimize} ${maven.compiler.parameters} ${maven.compiler.release} ${maven.compiler.showDeprecation} ${maven.compiler.showWarnings} ${maven.test.skip} ${maven.compiler.skipMultiThreadWarning} ${maven.compiler.source} ${lastModGranularityMs} ${maven.compiler.target} ${maven.compiler.testRelease} ${maven.compiler.testSource} ${maven.compiler.testTarget} ${maven.compiler.useIncrementalCompilation} ${maven.compiler.verbose} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-surefire-plugin:2.22.2:test (default-test) [DEBUG] Style: Regular [DEBUG] Configuration: ${maven.test.additionalClasspath} @{argLine} -Xms512m -Xmx512m -Dapple.awt.UIElement="true" ${childDelegation} ${maven.test.dependency.excludes} ${maven.surefire.debug} ${dependenciesToScan} ${disableXmlReport} ${enableAssertions} ${surefire.encoding} ${excludedGroups} ${surefire.excludesFile} ${surefire.failIfNoSpecifiedTests} ${failIfNoTests} ${forkCount} ${forkMode} ${surefire.exitTimeout} ${surefire.timeout} ${groups} ${surefire.includesFile} ${junitArtifactName} ${junitPlatformArtifactName} ${jvm} ${objectFactory} ${parallel} ${parallelOptimized} ${surefire.parallel.forcedTimeout} ${surefire.parallel.timeout} ${perCoreThreadCount} ${plugin.artifactMap} ${surefire.printSummary} ${project.artifactMap} ${maven.test.redirectTestOutputToFile} ${surefire.reportFormat} ${surefire.reportNameSuffix} ${surefire.rerunFailingTestsCount} ${reuseForks} ${surefire.runOrder} ${surefire.shutdown} ${maven.test.skip} ${surefire.skipAfterFailureCount} ${maven.test.skip.exec} ${skipTests} ${surefire.suiteXmlFiles} ${tempDir} ${test} ${maven.test.failure.ignore} ${testNGArtifactName} ${threadCount} ${threadCountClasses} ${threadCountMethods} ${threadCountSuites} ${trimStackTrace} ${surefire.useFile} ${surefire.useManifestOnlyJar} ${surefire.useSystemClassLoader} ${useUnlimitedThreads} ${basedir} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-jar-plugin:3.2.0:jar (default-jar) [DEBUG] Style: Regular [DEBUG] Configuration: true true true ${package-guess} ${buildNumber} 2021-12-30T04:00:03+0000 ${package-guess} ${maven.jar.forceCreation} true ${jar.useDefaultManifestFile} [DEBUG] --- init fork of net.preibisch:BigStitcher-Spark:0.0.1-SNAPSHOT for org.apache.maven.plugins:maven-source-plugin:3.2.1:jar (attach-sources-jar) --- [DEBUG] Dependencies (collect): [test] [DEBUG] Dependencies (resolve): [runtime] [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-enforcer-plugin:3.0.0-M3:enforce (enforce-rules) [DEBUG] Style: Regular [DEBUG] Configuration: ${rules} ${enforcer.fail} ${enforcer.failFast} ${enforcer.ignoreCache} 3.3.9 Plugins need to be versioned! [1.8.0-101,) No Duplicate Classes Allowed! - For duplicate transitive dependencies, add dependency exclusions. - For duplications between direct dependencies, resolve or add ignored classes to this rule's configuration. true com.esotericsoftware.kryo.*,com.esotericsoftware.minlog.*,com.esotericsoftware.reflectasm.*,com.google.inject.*,jnr.ffi.*,org.apache.hadoop.yarn.*.package-info,org.apache.spark.unused.UnusedStubClass,org.hibernate.stat.ConcurrentStatisticsImpl,org.jetbrains.kotlin.daemon.common.*,org.junit.runner.Runner founder,lead,developer,debugger,reviewer,support,maintainer founder,lead,developer,debugger,reviewer,support,maintainer 1.8 com.headius:invokebinder com.sun:tools module-info test name description url inceptionYear organization licenses developers contributors mailingLists scm issueManagement ciManagement properties//license.licenseName properties//license.copyrightOwners org.scijava,net.imagej,net.imglib2,io.scif,sc.fiji ${enforcer.skip} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.codehaus.mojo:build-helper-maven-plugin:3.0.0:regex-property (sanitize-version) [DEBUG] Style: Regular [DEBUG] Configuration: false sanitizedVersion ^([0-9]+)\.([0-9]+)\.([0-9]+).*$ $1.$2.$3 0.0.1-SNAPSHOT [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.codehaus.mojo:build-helper-maven-plugin:3.0.0:regex-property (guess-package) [DEBUG] Style: Regular [DEBUG] Configuration: false package-guess [^a-z0-9_.]+ _ net.preibisch.BigStitcher-Spark [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.codehaus.mojo:buildnumber-maven-plugin:1.4:create (default) [DEBUG] Style: Regular [DEBUG] Configuration: ${maven.buildNumber.buildNumberPropertyName} ${maven.buildNumber.doCheck} ${maven.buildNumber.doUpdate} ${maven.buildNumber.format} true ${maven.buildNumber.locale} ${password} UNKNOWN ${maven.buildNumber.scmBranchPropertyName} ${maven.buildNumber.scmDirectory} ${maven.buildNumber.shortRevisionLength} ${maven.buildNumber.skip} ${maven.buildNumber.timestampFormat} ${maven.buildNumber.timestampPropertyName} ${maven.buildNumber.useLastCommittedRevision} ${username} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.scijava:scijava-maven-plugin:2.0.0:set-rootdir (set-rootdir) [DEBUG] Style: Regular [DEBUG] Configuration: ${setRootdir.rootdirPropertyName} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.jacoco:jacoco-maven-plugin:0.8.6:prepare-agent (jacoco-initialize) [DEBUG] Style: Regular [DEBUG] Configuration:
${jacoco.address}
${jacoco.append} ${jacoco.classDumpDir} ${jacoco.destFile} ${jacoco.dumpOnExit} ${jacoco.exclClassLoaders} ${jacoco.inclBootstrapClasses} ${jacoco.inclNoLocationClasses} ${jacoco.jmx} ${jacoco.output} ${plugin.artifactMap} ${jacoco.port} ${project} ${jacoco.propertyName} ${jacoco.sessionId} ${jacoco.skip} [DEBUG] --- exit fork of net.preibisch:BigStitcher-Spark:0.0.1-SNAPSHOT for org.apache.maven.plugins:maven-source-plugin:3.2.1:jar (attach-sources-jar) --- [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-source-plugin:3.2.1:jar (attach-sources-jar) [DEBUG] Style: Regular [DEBUG] Configuration: ${maven.source.attach} ${maven.source.classifier} ${maven.source.excludeResources} ${maven.source.forceCreation} ${maven.source.includePom} ${maven.source.skip} ${maven.source.useDefaultExcludes} ${maven.source.useDefaultManifestFile} [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.jacoco:jacoco-maven-plugin:0.8.6:report (jacoco-site) [DEBUG] Style: Regular [DEBUG] Configuration: ${jacoco.dataFile} ${project.reporting.outputEncoding} ${project} ${jacoco.skip} ${project.build.sourceEncoding} </configuration> [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-shade-plugin:3.2.2:shade (default) [DEBUG] Style: Regular [DEBUG] Configuration: <?xml version="1.0" encoding="UTF-8"?> <configuration> <createDependencyReducedPom default-value="true"/> <dependencyReducedPomLocation default-value="${basedir}/dependency-reduced-pom.xml"/> <filters> <filter> <artifact>*:*</artifact> <excludes> <exclude>META-INF/*.SF</exclude> <exclude>META-INF/*.DSA</exclude> <exclude>META-INF/*.RSA</exclude> </excludes> </filter> </filters> <generateUniqueDependencyReducedPom default-value="false"/> <localRepository default-value="${localRepository}"/> <outputDirectory default-value="${project.build.directory}"/> <project default-value="${project}"/> <relocations> <relocation> <pattern>org.apache.commons.compress</pattern> <shadedPattern>org.janelia.saalfeldlab.org.apache.commons.compress</shadedPattern> </relocation> </relocations> <remoteArtifactRepositories default-value="${project.remoteArtifactRepositories}"/> <session default-value="${session}"/> <shadeSourcesContent default-value="false">${shadeSourcesContent}</shadeSourcesContent> <shadeTestJar default-value="false"/> <shadedArtifactId default-value="${project.artifactId}"/> <shadedClassifierName default-value="shaded"/> <transformers combine.children="append"> <transformer implementation="org.apache.maven.plugins.shade.resource.AppendingTransformer"> <resource>META-INF/json/mpicbg.spim.data.generic.sequence.ImgLoaderIo</resource> </transformer> </transformers> <useBaseVersion default-value="false"/> </configuration> [DEBUG] ----------------------------------------------------------------------- [DEBUG] Goal: org.apache.maven.plugins:maven-jar-plugin:3.2.0:test-jar (default) [DEBUG] Style: Regular [DEBUG] Configuration: <?xml version="1.0" encoding="UTF-8"?> <configuration> <archive> <manifest> <addClasspath>true</addClasspath> <addDefaultImplementationEntries>true</addDefaultImplementationEntries> <addDefaultSpecificationEntries>true</addDefaultSpecificationEntries> <mainClass></mainClass> <packageName>${package-guess}</packageName> </manifest> <manifestEntries> <Premain-Class></Premain-Class> <Implementation-Build>${buildNumber}</Implementation-Build> <Implementation-Date>2021-12-30T04:00:03+0000</Implementation-Date> <Automatic-Module-Name>${package-guess}</Automatic-Module-Name> </manifestEntries> </archive> <classifier default-value="tests"/> <finalName default-value="${project.build.finalName}"/> <forceCreation default-value="false">${maven.jar.forceCreation}</forceCreation> <outputDirectory default-value="${project.build.directory}"/> <outputTimestamp default-value="${project.build.outputTimestamp}"/> <project default-value="${project}"/> <session default-value="${session}"/> <skip>${maven.test.skip}</skip> <skipIfEmpty default-value="false">true</skipIfEmpty> <testClassesDirectory default-value="${project.build.testOutputDirectory}"/> <useDefaultManifestFile default-value="false">${jar.useDefaultManifestFile}</useDefaultManifestFile> </configuration> [DEBUG] ======================================================================= [DEBUG] Dependency collection stats: {ConflictMarker.analyzeTime=4119051, ConflictMarker.markTime=1151027, ConflictMarker.nodeCount=915, ConflictIdSorter.graphTime=1863793, ConflictIdSorter.topsortTime=365839, ConflictIdSorter.conflictIdCount=221, ConflictIdSorter.conflictIdCycleCount=0, ConflictResolver.totalTime=27607258, ConflictResolver.conflictItemCount=553, DefaultDependencyCollector.collectTime=962557299, DefaultDependencyCollector.transformTime=35178562} [DEBUG] net.preibisch:BigStitcher-Spark:jar:0.0.1-SNAPSHOT [DEBUG] com.amazonaws:aws-java-sdk-s3:jar:1.11.796:compile [DEBUG] com.amazonaws:aws-java-sdk-kms:jar:1.11.796:compile [DEBUG] com.amazonaws:aws-java-sdk-core:jar:1.11.796:compile [DEBUG] commons-logging:commons-logging:jar:1.2:compile (version managed from 1.1.3) [DEBUG] org.apache.httpcomponents:httpclient:jar:4.5.12:compile (version managed from 4.5.9) [DEBUG] org.apache.httpcomponents:httpcore:jar:4.4.13:compile (version managed from 4.4.13) [DEBUG] software.amazon.ion:ion-java:jar:1.0.2:compile [DEBUG] com.fasterxml.jackson.dataformat:jackson-dataformat-cbor:jar:2.6.7:compile [DEBUG] joda-time:joda-time:jar:2.10.6:compile (version managed from 2.8.1) [DEBUG] com.amazonaws:jmespath-java:jar:1.11.796:compile [DEBUG] org.janelia.saalfeldlab:n5:jar:2.2.1:compile [DEBUG] org.tukaani:xz:jar:1.8:compile (version managed from 1.8) [DEBUG] org.lz4:lz4-java:jar:1.7.1:compile (version managed from 1.5.0) [DEBUG] com.google.code.gson:gson:jar:2.8.6:compile (version managed from 2.8.5) [DEBUG] org.scijava:scijava-common:jar:2.85.0:compile (version managed from 2.77.0) [DEBUG] org.scijava:parsington:jar:2.0.0:compile (version managed from 2.0.0) [DEBUG] org.bushe:eventbus:jar:1.4:compile [DEBUG] org.apache.commons:commons-compress:jar:1.20:compile (version managed from 1.19) [DEBUG] org.janelia.saalfeldlab:n5-aws-s3:jar:3.2.0:compile [DEBUG] ch.qos.logback:logback-classic:jar:1.2.3:compile [DEBUG] ch.qos.logback:logback-core:jar:1.2.3:compile (version managed from 1.2.3) [DEBUG] org.slf4j:slf4j-api:jar:1.7.30:compile (version managed from 1.7.25) [DEBUG] com.fasterxml.jackson.core:jackson-databind:jar:2.6.5:compile [DEBUG] com.fasterxml.jackson.core:jackson-annotations:jar:2.6.0:compile [DEBUG] com.fasterxml.jackson.core:jackson-core:jar:2.6.5:compile [DEBUG] org.apache.spark:spark-core_2.11:jar:2.4.7:compile (exclusions managed) [DEBUG] com.thoughtworks.paranamer:paranamer:jar:2.8:compile [DEBUG] org.apache.avro:avro:jar:1.8.2:compile [DEBUG] org.codehaus.jackson:jackson-core-asl:jar:1.9.13:compile [DEBUG] org.codehaus.jackson:jackson-mapper-asl:jar:1.9.13:compile [DEBUG] org.apache.avro:avro-mapred:jar:hadoop2:1.8.2:compile [DEBUG] org.apache.avro:avro-ipc:jar:1.8.2:compile [DEBUG] commons-codec:commons-codec:jar:1.14:compile (version managed from 1.9) [DEBUG] com.twitter:chill_2.11:jar:0.9.3:compile [DEBUG] com.esotericsoftware:kryo-shaded:jar:4.0.2:compile [DEBUG] com.esotericsoftware:minlog:jar:1.3.0:compile [DEBUG] org.objenesis:objenesis:jar:2.5.1:compile [DEBUG] com.twitter:chill-java:jar:0.9.3:compile [DEBUG] org.apache.xbean:xbean-asm6-shaded:jar:4.8:compile [DEBUG] org.apache.hadoop:hadoop-client:jar:2.6.5:compile [DEBUG] org.apache.hadoop:hadoop-common:jar:2.6.5:compile [DEBUG] commons-cli:commons-cli:jar:1.2:compile [DEBUG] xmlenc:xmlenc:jar:0.52:compile [DEBUG] commons-httpclient:commons-httpclient:jar:3.1:compile [DEBUG] commons-io:commons-io:jar:2.7:compile (version managed from 2.4) [DEBUG] commons-collections:commons-collections:jar:3.2.2:compile (version managed from 3.2.2) [DEBUG] commons-lang:commons-lang:jar:2.6:compile (version managed from 2.6) [DEBUG] commons-configuration:commons-configuration:jar:1.6:compile [DEBUG] commons-digester:commons-digester:jar:1.8:compile [DEBUG] commons-beanutils:commons-beanutils:jar:1.9.4:compile (version managed from 1.7.0) [DEBUG] com.google.protobuf:protobuf-java:jar:2.5.0:compile [DEBUG] org.apache.hadoop:hadoop-auth:jar:2.6.5:compile [DEBUG] org.apache.directory.server:apacheds-kerberos-codec:jar:2.0.0-M15:compile [DEBUG] org.apache.directory.server:apacheds-i18n:jar:2.0.0-M15:compile [DEBUG] org.apache.directory.api:api-asn1-api:jar:1.0.0-M20:compile [DEBUG] org.apache.directory.api:api-util:jar:1.0.0-M20:compile [DEBUG] org.apache.curator:curator-client:jar:2.6.0:compile [DEBUG] org.htrace:htrace-core:jar:3.0.4:compile [DEBUG] org.apache.hadoop:hadoop-hdfs:jar:2.6.5:compile [DEBUG] org.mortbay.jetty:jetty-util:jar:6.1.26:compile [DEBUG] xerces:xercesImpl:jar:2.9.1:compile [DEBUG] org.apache.hadoop:hadoop-mapreduce-client-app:jar:2.6.5:compile [DEBUG] org.apache.hadoop:hadoop-mapreduce-client-common:jar:2.6.5:compile [DEBUG] org.apache.hadoop:hadoop-yarn-client:jar:2.6.5:compile [DEBUG] org.apache.hadoop:hadoop-yarn-server-common:jar:2.6.5:compile [DEBUG] org.apache.hadoop:hadoop-mapreduce-client-shuffle:jar:2.6.5:compile [DEBUG] org.apache.hadoop:hadoop-yarn-api:jar:2.6.5:compile [DEBUG] org.apache.hadoop:hadoop-mapreduce-client-core:jar:2.6.5:compile [DEBUG] org.apache.hadoop:hadoop-yarn-common:jar:2.6.5:compile [DEBUG] javax.xml.bind:jaxb-api:jar:2.2.2:compile [DEBUG] javax.xml.stream:stax-api:jar:1.0-2:compile [DEBUG] org.codehaus.jackson:jackson-jaxrs:jar:1.9.13:compile [DEBUG] org.codehaus.jackson:jackson-xc:jar:1.9.13:compile [DEBUG] org.apache.hadoop:hadoop-mapreduce-client-jobclient:jar:2.6.5:compile [DEBUG] org.apache.hadoop:hadoop-annotations:jar:2.6.5:compile [DEBUG] org.apache.spark:spark-launcher_2.11:jar:2.4.7:compile [DEBUG] org.apache.spark:spark-kvstore_2.11:jar:2.4.7:compile [DEBUG] org.fusesource.leveldbjni:leveldbjni-all:jar:1.8:compile [DEBUG] org.apache.spark:spark-network-common_2.11:jar:2.4.7:compile [DEBUG] org.apache.spark:spark-network-shuffle_2.11:jar:2.4.7:compile [DEBUG] org.apache.spark:spark-unsafe_2.11:jar:2.4.7:compile [DEBUG] javax.activation:activation:jar:1.1.1:compile [DEBUG] org.apache.curator:curator-recipes:jar:2.6.0:compile [DEBUG] org.apache.curator:curator-framework:jar:2.6.0:compile [DEBUG] org.apache.zookeeper:zookeeper:jar:3.4.6:compile [DEBUG] javax.servlet:javax.servlet-api:jar:3.1.0:compile [DEBUG] org.apache.commons:commons-lang3:jar:3.10:compile (version managed from 3.5) [DEBUG] org.apache.commons:commons-math3:jar:3.6.1:compile (version managed from 3.4.1) [DEBUG] com.google.code.findbugs:jsr305:jar:1.3.9:compile [DEBUG] log4j:log4j:jar:1.2.17:compile [DEBUG] com.ning:compress-lzf:jar:1.0.3:compile [DEBUG] org.xerial.snappy:snappy-java:jar:1.1.7.5:compile [DEBUG] com.github.luben:zstd-jni:jar:1.3.2-2:compile [DEBUG] org.roaringbitmap:RoaringBitmap:jar:0.7.45:compile [DEBUG] org.roaringbitmap:shims:jar:0.7.45:compile [DEBUG] commons-net:commons-net:jar:3.1:compile [DEBUG] org.scala-lang:scala-library:jar:2.11.12:compile [DEBUG] org.json4s:json4s-jackson_2.11:jar:3.5.3:compile [DEBUG] org.json4s:json4s-core_2.11:jar:3.5.3:compile [DEBUG] org.json4s:json4s-ast_2.11:jar:3.5.3:compile [DEBUG] org.json4s:json4s-scalap_2.11:jar:3.5.3:compile [DEBUG] org.scala-lang.modules:scala-xml_2.11:jar:1.0.6:compile [DEBUG] org.glassfish.jersey.core:jersey-common:jar:2.22.2:compile [DEBUG] javax.ws.rs:javax.ws.rs-api:jar:2.0.1:compile [DEBUG] javax.annotation:javax.annotation-api:jar:1.2:compile [DEBUG] org.glassfish.jersey.bundles.repackaged:jersey-guava:jar:2.22.2:compile [DEBUG] org.glassfish.hk2:hk2-api:jar:2.4.0-b34:compile [DEBUG] org.glassfish.hk2:hk2-utils:jar:2.4.0-b34:compile [DEBUG] org.glassfish.hk2:hk2-locator:jar:2.4.0-b34:compile [DEBUG] org.javassist:javassist:jar:3.27.0-GA:compile (version managed from 3.18.1-GA) [DEBUG] org.glassfish.hk2:osgi-resource-locator:jar:1.0.1:compile [DEBUG] org.glassfish.jersey.core:jersey-server:jar:2.22.2:compile [DEBUG] org.glassfish.jersey.media:jersey-media-jaxb:jar:2.22.2:compile [DEBUG] javax.validation:validation-api:jar:1.1.0.Final:compile [DEBUG] org.glassfish.jersey.containers:jersey-container-servlet:jar:2.22.2:compile [DEBUG] org.glassfish.jersey.containers:jersey-container-servlet-core:jar:2.22.2:compile [DEBUG] com.clearspring.analytics:stream:jar:2.7.0:compile [DEBUG] io.dropwizard.metrics:metrics-core:jar:3.1.5:compile [DEBUG] io.dropwizard.metrics:metrics-jvm:jar:3.1.5:compile [DEBUG] io.dropwizard.metrics:metrics-json:jar:3.1.5:compile [DEBUG] io.dropwizard.metrics:metrics-graphite:jar:3.1.5:compile [DEBUG] com.fasterxml.jackson.module:jackson-module-scala_2.11:jar:2.6.7.1:compile [DEBUG] org.scala-lang:scala-reflect:jar:2.11.8:compile [DEBUG] com.fasterxml.jackson.module:jackson-module-paranamer:jar:2.7.9:compile [DEBUG] org.apache.ivy:ivy:jar:2.4.0:compile [DEBUG] oro:oro:jar:2.0.8:compile [DEBUG] net.razorvine:pyrolite:jar:4.13:compile [DEBUG] net.sf.py4j:py4j:jar:0.10.7:compile [DEBUG] org.apache.spark:spark-tags_2.11:jar:2.4.7:compile [DEBUG] org.apache.commons:commons-crypto:jar:1.0.0:compile [DEBUG] org.spark-project.spark:unused:jar:1.0.0:compile [DEBUG] com.google.guava:guava:jar:21.0:compile [DEBUG] io.netty:netty-all:jar:4.1.17.Final:compile [DEBUG] io.netty:netty:jar:3.9.9.Final:compile [DEBUG] net.preibisch:BigStitcher:jar:0.8.3:compile [DEBUG] net.preibisch:multiview-reconstruction:jar:0.7.2:compile (version managed from 0.11.2) [DEBUG] sc.fiji:Fiji_Plugins:jar:3.1.1:compile (version managed from 3.1.1) [DEBUG] net.imglib2:imglib2-ui:jar:2.0.1:compile (version managed from 2.0.0) [DEBUG] net.imglib2:imglib2-algorithm-gpl:jar:0.2.5:compile (version managed from 0.2.3) [DEBUG] ome:formats-api:jar:6.5.1:compile (version managed from 6.3.0) (exclusions managed) [DEBUG] org.openmicroscopy:ome-codecs:jar:0.3.0:compile [DEBUG] org.openmicroscopy:ome-jai:jar:0.1.0:compile [DEBUG] ome:formats-bsd:jar:6.5.1:compile (version managed from 6.3.0) (exclusions managed) [DEBUG] org.openmicroscopy:specification:jar:6.1.0:compile [DEBUG] ome:turbojpeg:jar:6.5.1:compile [DEBUG] org.scijava:native-lib-loader:jar:2.3.4:compile (version managed from 2.1.4) [DEBUG] com.jgoodies:jgoodies-forms:jar:1.7.2:compile [DEBUG] com.jgoodies:jgoodies-common:jar:1.7.0:compile [DEBUG] com.esotericsoftware.kryo:kryo:jar:2.24.0:compile [DEBUG] com.esotericsoftware.minlog:minlog:jar:1.2:compile [DEBUG] org.perf4j:perf4j:jar:0.9.16:compile [DEBUG] com.drewnoakes:metadata-extractor:jar:2.11.0:compile [DEBUG] com.adobe.xmp:xmpcore:jar:5.1.3:compile [DEBUG] ome:jxrlib-all:jar:0.2.4:compile (version managed from 0.2.4) [DEBUG] ome:formats-gpl:jar:6.5.1:compile (version managed from 6.3.0) [DEBUG] org.openmicroscopy:ome-mdbtools:jar:5.3.2:compile [DEBUG] org.openmicroscopy:metakit:jar:5.3.2:compile (version managed from 5.3.2) (exclusions managed) [DEBUG] org.openmicroscopy:ome-poi:jar:5.3.3:compile (version managed from 5.3.3) [DEBUG] edu.ucar:cdm:jar:4.6.13:compile [DEBUG] edu.ucar:httpservices:jar:4.6.13:compile [DEBUG] org.apache.httpcomponents:httpmime:jar:4.5.1:compile [DEBUG] com.mchange:c3p0:jar:0.9.5.3:compile [DEBUG] com.mchange:mchange-commons-java:jar:0.2.15:compile [DEBUG] woolz:JWlz:jar:1.4.0:compile [DEBUG] org.json:json:jar:20090211:compile [DEBUG] org.openmicroscopy:ome-xml:jar:6.1.0:compile (version managed from 6.0.1) [DEBUG] org.openmicroscopy:ome-common:jar:6.0.4:compile (version managed from 6.0.4) (exclusions managed) [DEBUG] io.minio:minio:jar:5.0.2:compile [DEBUG] com.google.http-client:google-http-client-xml:jar:1.20.0:compile [DEBUG] com.google.http-client:google-http-client:jar:1.20.0:compile [DEBUG] xpp3:xpp3:jar:1.1.4c:compile [DEBUG] com.squareup.okhttp3:okhttp:jar:3.7.0:compile [DEBUG] com.squareup.okio:okio:jar:1.12.0:compile [DEBUG] net.java.dev.jna:jna:jar:4.5.2:compile (version managed from 4.5.2) [DEBUG] org.jdom:jdom2:jar:2.0.6:compile (version managed from 2.0.6) [DEBUG] org.jfree:jfreechart:jar:1.5.0:compile (version managed from 1.5.0) (exclusions managed) [DEBUG] args4j:args4j:jar:2.33:compile [DEBUG] org.janelia.saalfeldlab:n5-imglib2:jar:3.5.1:compile (version managed from 3.4.1) [DEBUG] net.imglib2:imglib2-label-multisets:jar:0.9.0:compile (version managed from 0.8.1) [DEBUG] sc.fiji:spim_data:jar:2.2.4:compile (version managed from 2.2.4) [DEBUG] sc.fiji:bigdataviewer-core:jar:9.0.6:compile (version managed from 10.2.0) [DEBUG] cisd:jhdf5:jar:14.12.6:compile (version managed from 14.12.6) [DEBUG] org.scijava:ui-behaviour:jar:2.0.3:compile (version managed from 2.0.1) [DEBUG] org.yaml:snakeyaml:jar:1.26:compile (version managed from 1.26) [DEBUG] org.scijava:scijava-listeners:jar:1.0.0-beta-3:compile (version managed from 1.0.0-beta-3) [DEBUG] com.miglayout:miglayout-swing:jar:5.2:compile (version managed from 5.2) [DEBUG] com.miglayout:miglayout-core:jar:5.2:compile (version managed from 5.2) [DEBUG] sc.fiji:bigdataviewer-vistools:jar:1.0.0-beta-21:compile (version managed from 1.0.0-beta-28) [DEBUG] net.imglib2:imglib2:jar:5.11.1:compile (version managed from 5.12.0) [DEBUG] net.imglib2:imglib2-cache:jar:1.0.0-beta-15:compile (version managed from 1.0.0-beta-16) [DEBUG] com.github.ben-manes.caffeine:caffeine:jar:2.4.0:compile [DEBUG] org.scijava:scijava-optional:jar:1.0.0:compile (version managed from 1.0.0) [DEBUG] net.preibisch:multiview-simulation:jar:0.2.0:compile (version managed from 0.2.0) [DEBUG] mpicbg:mpicbg:jar:1.4.1:compile (version managed from 1.4.1) [DEBUG] gov.nist.math:jama:jar:1.0.3:compile (version managed from 1.0.3) [DEBUG] net.imglib2:imglib2-algorithm:jar:0.11.2:compile (version managed from 0.12.0) [DEBUG] net.imglib2:imglib2-roi:jar:0.10.4:compile (version managed from 0.9.0) [DEBUG] net.sf.trove4j:trove4j:jar:3.0.3:compile (version managed from 3.0.3) [DEBUG] org.ojalgo:ojalgo:jar:45.1.1:compile (version managed from 45.1.1) [DEBUG] net.imglib2:imglib2-realtransform:jar:3.1.0:compile (version managed from 3.1.0) [DEBUG] jitk:jitk-tps:jar:3.0.1:compile (version managed from 3.0.1) [DEBUG] com.googlecode.efficient-java-matrix-library:ejml:jar:0.24:compile [DEBUG] sc.fiji:fiji-lib:jar:2.1.2:compile (version managed from 2.1.3) [DEBUG] net.imagej:ij1-patcher:jar:1.2.0:compile (version managed from 0.12.5) [DEBUG] net.imglib2:imglib2-algorithm-fft:jar:0.2.0:compile (version managed from 0.2.0) [DEBUG] edu.mines:mines-jtk:jar:20151125:compile (version managed from 20151125) [DEBUG] net.imagej:ij:jar:1.53d:compile (version managed from 1.53f) (exclusions managed) [DEBUG] net.imglib2:imglib2-ij:jar:2.0.0-beta-46:compile (version managed from 2.0.0-beta-46) [DEBUG] net.imagej:imagej-common:jar:0.34.0:compile (version managed from 0.31.0) [DEBUG] org.scijava:scijava-table:jar:0.7.0:compile (version managed from 0.6.1) [DEBUG] edu.ucar:udunits:jar:4.3.18:compile [DEBUG] sc.fiji:legacy-imglib1:jar:1.1.9:compile (version managed from 1.1.9) [DEBUG] org.scijava:vecmath:jar:1.6.0-scijava-2:compile (version managed from 1.6.0-scijava-2) [DEBUG] info.picocli:picocli:jar:4.3.2:compile [INFO] [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ BigStitcher-Spark --- [DEBUG] Dependency collection stats: {ConflictMarker.analyzeTime=98915, ConflictMarker.markTime=31126, ConflictMarker.nodeCount=14, ConflictIdSorter.graphTime=46567, ConflictIdSorter.topsortTime=21940, ConflictIdSorter.conflictIdCount=12, ConflictIdSorter.conflictIdCycleCount=0, ConflictResolver.totalTime=283505, ConflictResolver.conflictItemCount=14, DefaultDependencyCollector.collectTime=30921312, DefaultDependencyCollector.transformTime=516094} [DEBUG] org.apache.maven.plugins:maven-clean-plugin:jar:3.1.0: [DEBUG] org.apache.maven:maven-plugin-api:jar:3.0:compile [DEBUG] org.apache.maven:maven-model:jar:3.0:compile [DEBUG] org.codehaus.plexus:plexus-utils:jar:2.0.4:compile [DEBUG] org.apache.maven:maven-artifact:jar:3.0:compile [DEBUG] org.sonatype.sisu:sisu-inject-plexus:jar:1.4.2:compile [DEBUG] org.codehaus.plexus:plexus-component-annotations:jar:1.7.1:compile [DEBUG] org.codehaus.plexus:plexus-classworlds:jar:2.2.3:compile [DEBUG] org.sonatype.sisu:sisu-inject-bean:jar:1.4.2:compile [DEBUG] org.sonatype.sisu:sisu-guice:jar:noaop:2.1.7:compile [DEBUG] org.apache.maven.shared:maven-shared-utils:jar:3.2.1:compile [DEBUG] commons-io:commons-io:jar:2.5:compile [DEBUG] Created new class realm plugin>org.apache.maven.plugins:maven-clean-plugin:3.1.0 [DEBUG] Importing foreign packages into class realm plugin>org.apache.maven.plugins:maven-clean-plugin:3.1.0 [DEBUG] Imported: < project>net.preibisch:BigStitcher-Spark:0.0.1-SNAPSHOT [DEBUG] Populating class realm plugin>org.apache.maven.plugins:maven-clean-plugin:3.1.0 [DEBUG] Included: org.apache.maven.plugins:maven-clean-plugin:jar:3.1.0 [DEBUG] Included: org.codehaus.plexus:plexus-utils:jar:2.0.4 [DEBUG] Included: org.codehaus.plexus:plexus-component-annotations:jar:1.7.1 [DEBUG] Included: org.sonatype.sisu:sisu-inject-bean:jar:1.4.2 [DEBUG] Included: org.sonatype.sisu:sisu-guice:jar:noaop:2.1.7 [DEBUG] Included: org.apache.maven.shared:maven-shared-utils:jar:3.2.1 [DEBUG] Included: commons-io:commons-io:jar:2.5 [DEBUG] Configuring mojo org.apache.maven.plugins:maven-clean-plugin:3.1.0:clean from plugin realm ClassRealm[plugin>org.apache.maven.plugins:maven-clean-plugin:3.1.0, parent: jdk.internal.loader.ClassLoaders$AppClassLoader@55054057] [DEBUG] Configuring mojo 'org.apache.maven.plugins:maven-clean-plugin:3.1.0:clean' with basic configurator --> [DEBUG] (f) directory = /home/dps/Documents/github/BigStitcher-Spark/target [DEBUG] (f) excludeDefaultDirectories = false [DEBUG] (f) failOnError = true [DEBUG] (f) followSymLinks = false [DEBUG] (f) outputDirectory = /home/dps/Documents/github/BigStitcher-Spark/target/classes [DEBUG] (f) reportDirectory = /home/dps/Documents/github/BigStitcher-Spark/target/classes [DEBUG] (f) retryOnError = true [DEBUG] (f) skip = false [DEBUG] (f) testOutputDirectory = /home/dps/Documents/github/BigStitcher-Spark/target/test-classes [DEBUG] -- end configuration -- [INFO] Deleting /home/dps/Documents/github/BigStitcher-Spark/target [INFO] Deleting directory /home/dps/Documents/github/BigStitcher-Spark/target/classes [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 2.974 s [INFO] Finished at: 2021-12-29T21:00:06-07:00 [INFO] ------------------------------------------------------------------------ [ERROR] Failed to execute goal org.apache.maven.plugins:maven-clean-plugin:3.1.0:clean (default-clean) on project BigStitcher-Spark: Failed to clean project: Failed to delete /home/dps/Documents/github/BigStitcher-Spark/target/classes -> [Help 1] org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.apache.maven.plugins:maven-clean-plugin:3.1.0:clean (default-clean) on project BigStitcher-Spark: Failed to clean project: Failed to delete /home/dps/Documents/github/BigStitcher-Spark/target/classes at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:215) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:156) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:148) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:117) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:81) at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build (SingleThreadedBuilder.java:56) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute (LifecycleStarter.java:128) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:305) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:192) at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:105) at org.apache.maven.cli.MavenCli.execute (MavenCli.java:956) at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:288) at org.apache.maven.cli.MavenCli.main (MavenCli.java:192) at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0 (Native Method) at jdk.internal.reflect.NativeMethodAccessorImpl.invoke (NativeMethodAccessorImpl.java:62) at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke (DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke (Method.java:566) at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (Launcher.java:289) at org.codehaus.plexus.classworlds.launcher.Launcher.launch (Launcher.java:229) at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode (Launcher.java:415) at org.codehaus.plexus.classworlds.launcher.Launcher.main (Launcher.java:356) Caused by: org.apache.maven.plugin.MojoExecutionException: Failed to clean project: Failed to delete /home/dps/Documents/github/BigStitcher-Spark/target/classes at org.apache.maven.plugins.clean.CleanMojo.execute (CleanMojo.java:210) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo (DefaultBuildPluginManager.java:137) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:210) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:156) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:148) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:117) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:81) at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build (SingleThreadedBuilder.java:56) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute (LifecycleStarter.java:128) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:305) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:192) at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:105) at org.apache.maven.cli.MavenCli.execute (MavenCli.java:956) at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:288) at org.apache.maven.cli.MavenCli.main (MavenCli.java:192) at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0 (Native Method) at jdk.internal.reflect.NativeMethodAccessorImpl.invoke (NativeMethodAccessorImpl.java:62) at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke (DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke (Method.java:566) at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (Launcher.java:289) at org.codehaus.plexus.classworlds.launcher.Launcher.launch (Launcher.java:229) at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode (Launcher.java:415) at org.codehaus.plexus.classworlds.launcher.Launcher.main (Launcher.java:356) Caused by: java.io.IOException: Failed to delete /home/dps/Documents/github/BigStitcher-Spark/target/classes at org.apache.maven.plugins.clean.Cleaner.delete (Cleaner.java:251) at org.apache.maven.plugins.clean.Cleaner.delete (Cleaner.java:193) at org.apache.maven.plugins.clean.Cleaner.delete (Cleaner.java:160) at org.apache.maven.plugins.clean.Cleaner.delete (Cleaner.java:118) at org.apache.maven.plugins.clean.CleanMojo.execute (CleanMojo.java:189) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo (DefaultBuildPluginManager.java:137) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:210) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:156) at org.apache.maven.lifecycle.internal.MojoExecutor.execute (MojoExecutor.java:148) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:117) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject (LifecycleModuleBuilder.java:81) at org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build (SingleThreadedBuilder.java:56) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute (LifecycleStarter.java:128) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:305) at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:192) at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:105) at org.apache.maven.cli.MavenCli.execute (MavenCli.java:956) at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:288) at org.apache.maven.cli.MavenCli.main (MavenCli.java:192) at jdk.internal.reflect.NativeMethodAccessorImpl.invoke0 (Native Method) at jdk.internal.reflect.NativeMethodAccessorImpl.invoke (NativeMethodAccessorImpl.java:62) at jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke (DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke (Method.java:566) at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced (Launcher.java:289) at org.codehaus.plexus.classworlds.launcher.Launcher.launch (Launcher.java:229) at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode (Launcher.java:415) at org.codehaus.plexus.classworlds.launcher.Launcher.main (Launcher.java:356) [ERROR] [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException