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kapoorlab committed Apr 3, 2017
1 parent b209caf commit da281c4
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26 changes: 26 additions & 0 deletions .classpath
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<?xml version="1.0" encoding="UTF-8"?>
<classpath>
<classpathentry kind="src" output="target/classes" path="src/main/java">
<attributes>
<attribute name="optional" value="true"/>
<attribute name="maven.pomderived" value="true"/>
</attributes>
</classpathentry>
<classpathentry kind="src" output="target/test-classes" path="src/test/java">
<attributes>
<attribute name="optional" value="true"/>
<attribute name="maven.pomderived" value="true"/>
</attributes>
</classpathentry>
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.8">
<attributes>
<attribute name="maven.pomderived" value="true"/>
</attributes>
</classpathentry>
<classpathentry kind="con" path="org.eclipse.m2e.MAVEN2_CLASSPATH_CONTAINER">
<attributes>
<attribute name="maven.pomderived" value="true"/>
</attributes>
</classpathentry>
<classpathentry kind="output" path="target/classes"/>
</classpath>
23 changes: 23 additions & 0 deletions .project
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<?xml version="1.0" encoding="UTF-8"?>
<projectDescription>
<name>MTV_Tracker</name>
<comment></comment>
<projects>
</projects>
<buildSpec>
<buildCommand>
<name>org.eclipse.jdt.core.javabuilder</name>
<arguments>
</arguments>
</buildCommand>
<buildCommand>
<name>org.eclipse.m2e.core.maven2Builder</name>
<arguments>
</arguments>
</buildCommand>
</buildSpec>
<natures>
<nature>org.eclipse.jdt.core.javanature</nature>
<nature>org.eclipse.m2e.core.maven2Nature</nature>
</natures>
</projectDescription>
3 changes: 3 additions & 0 deletions .settings/org.eclipse.core.resources.prefs
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eclipse.preferences.version=1
encoding//src/main/java=UTF-8
encoding/<project>=UTF-8
8 changes: 8 additions & 0 deletions .settings/org.eclipse.jdt.core.prefs
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eclipse.preferences.version=1
org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled
org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.8
org.eclipse.jdt.core.compiler.compliance=1.8
org.eclipse.jdt.core.compiler.problem.assertIdentifier=error
org.eclipse.jdt.core.compiler.problem.enumIdentifier=error
org.eclipse.jdt.core.compiler.problem.forbiddenReference=warning
org.eclipse.jdt.core.compiler.source=1.8
4 changes: 4 additions & 0 deletions .settings/org.eclipse.m2e.core.prefs
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activeProfiles=
eclipse.preferences.version=1
resolveWorkspaceProjects=true
version=1
1 change: 1 addition & 0 deletions plugins.config
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Plugins>MTV Tracker, " Microtubule Tracker ", interactiveMT.Interactive_MT
137 changes: 137 additions & 0 deletions pom.xml
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>sc.fiji</groupId>
<artifactId>pom-bigdataviewer</artifactId>
<version>2.1.3</version>
</parent>
<groupId>net.imglib2.MTV_Tracker</groupId>
<artifactId>MTV_Tracker</artifactId>
<version>1.0.0</version>
<name>MicrotubuleTracker</name>

<dependencies>

<dependency>
<groupId>net.imglib2</groupId>
<artifactId>imglib2</artifactId>
</dependency>
<dependency>
<groupId>net.imagej</groupId>
<artifactId>ij</artifactId>
</dependency>
<!-- BigDataViewer dependencies -->
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>bigdataviewer-core</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>spim_data</artifactId>
</dependency>

<!-- Fiji dependencies -->
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>Fiji_Plugins</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>SPIM_Opener</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>VIB-lib</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>fiji-lib</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>legacy-imglib1</artifactId>
</dependency>
<dependency>
<groupId>net.imglib2</groupId>
<artifactId>imglib2-ij</artifactId>
</dependency>
<dependency>
<groupId>net.imglib2</groupId>
<artifactId>imglib2-ui</artifactId>
</dependency>
<dependency>
<groupId>net.imglib2</groupId>
<artifactId>imglib2-realtransform</artifactId>
</dependency>
<dependency>
<groupId>edu.mines</groupId>
<artifactId>mines-jtk</artifactId>

</dependency>
<dependency>
<groupId>net.sf.jgrapht</groupId>
<artifactId>jgrapht</artifactId>
</dependency>
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>fiji-lib</artifactId>
</dependency>
<dependency>
<groupId>net.imglib2</groupId>
<artifactId>imglib2-algorithm</artifactId>
</dependency>
<!-- Fiji dependencies -->
<dependency>
<groupId>sc.fiji</groupId>
<artifactId>Fiji_Plugins</artifactId>
</dependency>
<!-- ImageJ dependencies -->
<dependency>
<groupId>net.imagej</groupId>
<artifactId>ij</artifactId>
</dependency>
<!-- Third party dependencies -->
<dependency>
<groupId>gov.nist.math</groupId>
<artifactId>jama</artifactId>
</dependency>
<dependency>
<groupId>mpicbg</groupId>
<artifactId>mpicbg</artifactId>
</dependency>
<dependency>
<groupId>net.sf.jgrapht</groupId>
<artifactId>jgrapht</artifactId>
</dependency>
<dependency>
<groupId>net.java.dev.jna</groupId>
<artifactId>jna</artifactId>
</dependency>
<dependency>
<groupId>org.jdom</groupId>
<artifactId>jdom2</artifactId>
</dependency>
<dependency>
<groupId>org.jfree</groupId>
<artifactId>jcommon</artifactId>
</dependency>
<dependency>
<groupId>org.apache.poi</groupId>
<artifactId>poi-ooxml</artifactId>
<version>3.8-beta4</version>
</dependency>
<dependency>
<groupId>org.jfree</groupId>
<artifactId>jfreechart</artifactId>
</dependency>
</dependencies>

<repositories>
<!-- NB: for project parent -->
<repository>
<id>imagej.public</id>
<url>http://maven.imagej.net/content/groups/public</url>
</repository>
</repositories>

</project>
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6 changes: 6 additions & 0 deletions target/classes/com/mxgraph/analysis/package.html
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<HTML>
<BODY>
This package provides various algorithms for graph analysis, such as
shortest path and minimum spanning tree.
</BODY>
</HTML>
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6 changes: 6 additions & 0 deletions target/classes/com/mxgraph/canvas/package.html
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<HTML>
<BODY>
This package contains various implementations for painting a graph using
different technologies, such as Graphics2D, HTML, SVG or VML.
</BODY>
</HTML>
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5 changes: 5 additions & 0 deletions target/classes/com/mxgraph/io/package.html
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<HTML>
<BODY>
This package contains all classes for input/output.
</BODY>
</HTML>
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5 changes: 5 additions & 0 deletions target/classes/com/mxgraph/layout/package.html
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<HTML>
<BODY>
This package contains various graph layouts.
</BODY>
</HTML>
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5 changes: 5 additions & 0 deletions target/classes/com/mxgraph/model/package.html
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<HTML>
<BODY>
This package contains the classes that define a graph model.
</BODY>
</HTML>
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6 changes: 6 additions & 0 deletions target/classes/com/mxgraph/reader/package.html
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<HTML>
<BODY>
This package contains the classes required to turn an encoded mxGraphView
into an image using SAX and without having to create a graph model.
</BODY>
</HTML>
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8 changes: 8 additions & 0 deletions target/classes/com/mxgraph/swing/handler/package.html
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<HTML>
<BODY>
This package contains all classes required for mouse event handling in
JFC/Swing. The classes implement rubberband selection, mouse tracking,
creating connections, handling vertices and edges, moving cells, panning
and keystroke handling.
</BODY>
</HTML>
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