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# Generated by roxygen2: do not edit by hand
export(BayesSpikeSolver)
export(CandidateFilter)
export(EnsembleSolver)
export(FootprintFilter)
export(FootprintFinder)
export(GeneOntologyFilter)
export(HumanDHSFilter)
export(LassoPVSolver)
export(LassoSolver)
export(MotifMatcher)
export(PCAMax)
export(PearsonSolver)
export(RandomForestSolver)
export(RidgeSolver)
export(Solver)
export(SpearmanSolver)
export(SqrtLassoSolver)
export(Trena)
export(VarianceFilter)
export(getAvailableSolvers)
export(getCandidates)
export(parseChromLocString)
export(parseDatabaseUri)
export(run)
exportMethods(addStats)
exportMethods(addStatsSimple)
exportMethods(assessSnp)
exportMethods(closeDatabaseConnections)
exportMethods(createGeneModelFromRegulatoryRegions)
exportMethods(createGeneModelFromTfList)
exportMethods(findMatchesByChromosomalRegion)
exportMethods(getAssayData)
exportMethods(getCandidates)
exportMethods(getChromLoc)
exportMethods(getCoverage)
exportMethods(getEncodeRegulatoryTableNames)
exportMethods(getFootprintsForGene)
exportMethods(getFootprintsInRegion)
exportMethods(getGeneModelTableColumnNames)
exportMethods(getGenePromoterRegion)
exportMethods(getGtfGeneBioTypes)
exportMethods(getGtfMoleculeTypes)
exportMethods(getPfms)
exportMethods(getPromoterRegionsAllGenes)
exportMethods(getProximalPromoter)
exportMethods(getRegulators)
exportMethods(getRegulatoryChromosomalRegions)
exportMethods(getRegulatoryRegions)
exportMethods(getRegulatoryTableColumnNames)
exportMethods(getSequence)
exportMethods(getSolverNames)
exportMethods(getTarget)
exportMethods(normalizeModel)
exportMethods(rescalePredictorWeights)
exportMethods(show)
import(BSgenome)
import(BiocParallel)
import(GenomicRanges)
import(MotifDb)
import(RMySQL)
import(flare)
import(glmnet)
import(lassopv)
import(methods)
import(org.Hs.eg.db)
import(randomForest)
import(utils)
import(vbsr)
importFrom(DBI,dbConnect)
importFrom(DBI,dbDisconnect)
importFrom(DBI,dbGetQuery)
importFrom(DBI,dbListConnections)
importFrom(DBI,dbListTables)
importFrom(RPostgreSQL,dbConnect)
importFrom(RPostgreSQL,dbDisconnect)
importFrom(RPostgreSQL,dbGetQuery)
importFrom(RPostgreSQL,dbListConnections)
importFrom(RPostgreSQL,dbListTables)
importFrom(stats,fivenum)
importFrom(stats,prcomp)
importFrom(stats,sd)