From cc709b2aff7e21835b04bcc957cc9a5f2daa4b2e Mon Sep 17 00:00:00 2001 From: Andres Date: Wed, 19 Jul 2023 16:28:13 +0100 Subject: [PATCH 1/2] Define train method are it is required - removed hardcode line in main Signed-off-by: Andres --- monailabel/monaivista/lib/configs/vista_point_2pt5.py | 4 ++++ monailabel/monaivista/main.py | 5 ++--- 2 files changed, 6 insertions(+), 3 deletions(-) diff --git a/monailabel/monaivista/lib/configs/vista_point_2pt5.py b/monailabel/monaivista/lib/configs/vista_point_2pt5.py index 7a6e3c9..54cabef 100644 --- a/monailabel/monaivista/lib/configs/vista_point_2pt5.py +++ b/monailabel/monaivista/lib/configs/vista_point_2pt5.py @@ -165,3 +165,7 @@ def infer(self) -> Union[InferTask, Dict[str, InferTask]]: preload=strtobool(self.conf.get("preload", "false")), ) return task + + def trainer(self) -> Optional[TrainTask]: + None + diff --git a/monailabel/monaivista/main.py b/monailabel/monaivista/main.py index 5aa02a4..963b1bd 100644 --- a/monailabel/monaivista/main.py +++ b/monailabel/monaivista/main.py @@ -207,9 +207,8 @@ def main(): force=True, ) - str(Path.home()) - # studies = f"{home}/Dataset/Radiology" - studies = "/home/andres/Documents/workspace/disk-workspace/DatasetsMore/temp-TotalSegmentatorDataset/quickTest/" + home = str(Path.home()) + studies = f"{home}/Dataset/Radiology/WholeBodyCTDataset/test" parser = argparse.ArgumentParser() parser.add_argument("-s", "--studies", default=studies) From 61d3600187ed092e687383f2c5f142262b446c25 Mon Sep 17 00:00:00 2001 From: "pre-commit-ci[bot]" <66853113+pre-commit-ci[bot]@users.noreply.github.com> Date: Wed, 19 Jul 2023 15:28:44 +0000 Subject: [PATCH 2/2] [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --- monailabel/monaivista/lib/configs/vista_point_2pt5.py | 1 - 1 file changed, 1 deletion(-) diff --git a/monailabel/monaivista/lib/configs/vista_point_2pt5.py b/monailabel/monaivista/lib/configs/vista_point_2pt5.py index 54cabef..388e224 100644 --- a/monailabel/monaivista/lib/configs/vista_point_2pt5.py +++ b/monailabel/monaivista/lib/configs/vista_point_2pt5.py @@ -168,4 +168,3 @@ def infer(self) -> Union[InferTask, Dict[str, InferTask]]: def trainer(self) -> Optional[TrainTask]: None -