From c11c97f55ba85cd41093ff767b3c8244e7564abc Mon Sep 17 00:00:00 2001 From: Wenqi Li Date: Fri, 25 Jun 2021 10:39:47 +0100 Subject: [PATCH] fixes image dataset Signed-off-by: Wenqi Li --- modules/image_dataset.ipynb | 16 ++++++++-------- 1 file changed, 8 insertions(+), 8 deletions(-) diff --git a/modules/image_dataset.ipynb b/modules/image_dataset.ipynb index 066f5528bd..d990dc1cc2 100644 --- a/modules/image_dataset.ipynb +++ b/modules/image_dataset.ipynb @@ -59,11 +59,11 @@ "name": "stdout", "output_type": "stream", "text": [ - "MONAI version: 0.5.3+88.g5d9383e3\n", - "Numpy version: 1.20.3\n", - "Pytorch version: 1.8.1\n", + "MONAI version: 0.5.3+144.geec33b6d\n", + "Numpy version: 1.21.0\n", + "Pytorch version: 1.9.0\n", "MONAI flags: HAS_EXT = False, USE_COMPILED = False\n", - "MONAI rev id: 5d9383e3a97e1c42a81a7699ced1e52bd05ccb8e\n", + "MONAI rev id: eec33b6ddb987dc6be24ec0ace41bb55cc38a661\n", "\n", "Optional dependencies:\n", "Pytorch Ignite version: 0.4.4\n", @@ -72,11 +72,12 @@ "Pillow version: 8.2.0\n", "Tensorboard version: 2.5.0\n", "gdown version: 3.13.0\n", - "TorchVision version: 0.9.1\n", + "TorchVision version: 0.10.0\n", "ITK version: 5.1.2\n", - "tqdm version: 4.60.0\n", + "tqdm version: 4.61.1\n", "lmdb version: 1.2.1\n", "psutil version: 5.8.0\n", + "pandas version: 1.2.5\n", "\n", "For details about installing the optional dependencies, please visit:\n", " https://docs.monai.io/en/latest/installation.html#installing-the-recommended-dependencies\n", @@ -170,8 +171,7 @@ ], "source": [ "class TestCompose(Compose):\n", - " def __call__(self, input_):\n", - " data, meta = input_\n", + " def __call__(self, data, meta):\n", " data = self.transforms[0](data, meta) # ensure channel first\n", " data, _, meta[\"affine\"] = self.transforms[1](data, meta[\"affine\"]) # spacing\n", " if len(self.transforms) == 3:\n",