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Commits on May 27, 2016
  1. @nno

    Merge pull request #475 from effigies/mask

    ENH: Permit 4D image mask in fmri_dataset if time dimension is 1
    nno committed May 27, 2016
  2. @effigies

    TEST: Test 4d masks

    effigies committed May 26, 2016
Commits on May 26, 2016
  1. @effigies
Commits on May 21, 2016
  1. @yarikoptic

    Merge pull request #474 from swaroopgj/master

    BF: Relaxed tests a little to account for noisy/correlated features
    Closes #455
    yarikoptic committed May 20, 2016
Commits on May 20, 2016
  1. @swaroopgj

    BF: Relaxed tests a little to account for noisy and correlated featur…

    …es in randomly generated test datasets.
    swaroopgj committed May 20, 2016
Commits on May 12, 2016
  1. @yarikoptic
Commits on May 11, 2016
  1. @yarikoptic
Commits on May 10, 2016
  1. @yarikoptic

    Merge pull request #468 from yarikoptic/bf-py3

    ENH+BF(PY3): variety of fixes for PY3 (daily tests), and display also externals version
    yarikoptic committed May 10, 2016
  2. @yarikoptic
  3. @yarikoptic
Commits on May 3, 2016
  1. @yarikoptic

    BF: delay import of sklearn until used.

    Otherwise we would need to condition entire module on its presence
    yarikoptic committed May 2, 2016
  2. @yarikoptic

    ENH+BF(PY3): variety of fixes for PY3 (daily tests), and display also…

    … externals version in debug msg if found
    yarikoptic committed May 2, 2016
Commits on Apr 25, 2016
  1. @yarikoptic

    Merge pull request #445 from mvdoc/lassoregr

    ENH,TST: add rsa.Regression measure with tests + small fix on typos [reopens #420]
    yarikoptic committed Apr 25, 2016
  2. @mvdoc

    Merge remote-tracking branch 'origin/master' into lassoregr

    * origin/master: (117 commits)
      ENH: fixed up tests - now adhoc sl should work just fine with CustomPartitioner
      ENH: simplify SplitRFE doc example to nore require errorfx + reorder mappers to have mean(abs(normed)))
      BF: reduce required ACC while testing auc -- ran 100 times without failure
      BF: two tests must be skipped if hdf5 is NA
      DOC: Changed volume geometry warning to print dataset instead of dumping it on console
      minor change as per @nno's suggestion
      OPT: show only summary of representation of internal _src2aux of VolumeMaskDictionary object, as the full output may result in a significant slow-down of the __repr__ method
      DOC: update matrix plot range to clear confusion, and fixed a few typos
      ENH: made tests less stringent and some PEP8 cleanup
      Added a case to test to show it fails for certain cases which will be fixed by this commit
      BF: This handles surface-to-voxel queryengines where setting center seed is not meaningful
      BF: initializing wrong shapes of mappers_full in featselhyper
      BF: making featsel param when given as proportion to behave as intended
      ENH: use "super" when calling __init__ in pdist-related Measures
      BF: changing default nblocks to None
      ENH: Minor change to let the algorithm use nblocks even for nproc=1
      DOC: rudimentary docstring for FeatureSelectionHyperalignment pointing to SearchlightHyperalignment
      Added reference to the paper into ChangeLog
      RF: HyperalignmentMeasure -> FeatureSelectionHyperalignment + minor cleanup
      Fixed typo
      ...
    mvdoc committed Apr 25, 2016
  3. @yarikoptic

    Merge branch 'pr-452'

    * pr-452:
      BF: Fixing hyperalignment example so that it doesn't crash without lapack library
    yarikoptic committed Apr 25, 2016
  4. @yarikoptic

    Merge branch 'master' into pr-272

    * master: (107 commits)
      ENH: simplify SplitRFE doc example to nore require errorfx + reorder mappers to have mean(abs(normed)))
      BF: reduce required ACC while testing auc -- ran 100 times without failure
      BF: two tests must be skipped if hdf5 is NA
      DOC: Changed volume geometry warning to print dataset instead of dumping it on console
      minor change as per @nno's suggestion
      OPT: show only summary of representation of internal _src2aux of VolumeMaskDictionary object, as the full output may result in a significant slow-down of the __repr__ method
      DOC: update matrix plot range to clear confusion, and fixed a few typos
      ENH: made tests less stringent and some PEP8 cleanup
      Added a case to test to show it fails for certain cases which will be fixed by this commit
      BF: This handles surface-to-voxel queryengines where setting center seed is not meaningful
      BF: initializing wrong shapes of mappers_full in featselhyper
      BF: making featsel param when given as proportion to behave as intended
      ENH: use "super" when calling __init__ in pdist-related Measures
      BF: changing default nblocks to None
      ENH: Minor change to let the algorithm use nblocks even for nproc=1
      DOC: rudimentary docstring for FeatureSelectionHyperalignment pointing to SearchlightHyperalignment
      Added reference to the paper into ChangeLog
      RF: HyperalignmentMeasure -> FeatureSelectionHyperalignment + minor cleanup
      Fixed typo
      DOC: added brief changelog entry for slhyper, aiming for 2.5.0 release
      ...
    yarikoptic committed Apr 25, 2016
  5. @yarikoptic

    ENH: fixed up tests - now adhoc sl should work just fine with CustomP…

    …artitioner
    
    added also an assert for our assumption of having 1d indices in the dataset
    yarikoptic committed Apr 25, 2016
Commits on Apr 19, 2016
  1. @yarikoptic

    Merge pull request #467 from yarikoptic/bf/splitrfe-docsetc

    ENH: simplify SplitRFE doc example to nore require errorfx + reorder mappers
    yarikoptic committed Apr 19, 2016
  2. @yarikoptic

    ENH: simplify SplitRFE doc example to nore require errorfx + reorder …

    …mappers to have mean(abs(normed)))
    
    Closes #459
    Closes #460
    yarikoptic committed Apr 19, 2016
  3. @yarikoptic

    Merge pull request #466 from yarikoptic/bf-labile

    BF: reduce required ACC while testing auc -- ran 100 times without failure
    yarikoptic committed Apr 19, 2016
Commits on Apr 18, 2016
  1. @yarikoptic
  2. @nno

    Merge pull request #450 from swaroopgj/surfringqe

    NF: Adds SurfaceRingQueryEngine for surfaces similar to HollowSphere
    nno committed Apr 18, 2016
Commits on Apr 16, 2016
  1. @yarikoptic
Commits on Apr 14, 2016
  1. @nno

    Merge pull request #465 from swaroopgj/volgmwarningfix

    ENH: Changed volume geometry warning to print dataset instead of dumping the dataset
    nno committed Apr 14, 2016
  2. @swaroopgj
Commits on Apr 13, 2016
  1. @yarikoptic

    Merge pull request #454 from nno/_enh/pdist_init_super

    ENH: use "super" when calling __init__ in pdist-related Measures
    yarikoptic committed Apr 13, 2016
  2. @yarikoptic

    Merge pull request #458 from swaroopgj/featselfix

    Few bug fixes to handle feature selection, roi_seed, and datasets with different features
    yarikoptic committed Apr 13, 2016
  3. @yarikoptic

    Merge pull request #461 from swaroopgj/rsaexamplefix

    DOC: update matrix plot range to clear confusion, and fixed a few typos
    yarikoptic committed Apr 13, 2016
  4. @yarikoptic

    Merge pull request #462 from nno/_opt/faster_volume_mask_dict_repr

    OPT: show only summary of representation of internal _src2aux
    yarikoptic committed Apr 13, 2016
Commits on Apr 12, 2016
  1. @swaroopgj
  2. @nno

    OPT: show only summary of representation of internal _src2aux of Volu…

    …meMaskDictionary object, as the full output may result in a significant slow-down of the __repr__ method
    nno committed Apr 12, 2016
  3. @swaroopgj
  4. @swaroopgj
  5. @swaroopgj

    Added a case to test to show it fails for certain cases which will be…

    … fixed by this commit
    swaroopgj committed Apr 11, 2016
  6. @swaroopgj

    BF: This handles surface-to-voxel queryengines where setting center s…

    …eed is not meaningful
    swaroopgj committed Apr 11, 2016
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