IntegrativeBayes

This is the GitHub repository for our manuscript "A Bayesian Zero-Inflated Negative Binomial Regression Model for the Integrative Analysis of Microbiome Data".

To install our package:

# Install release version from CRAN
install.packages("devtools")
# Install development version from GitHub
devtools::install_github("shuangj00/IntegrativeBayes")

For a quick start, please read this tutorial page.

To learn more about our methods or to cite our work, please refer:

Shuang Jiang, Guanghua Xiao, Andrew Y. Koh, Qiwei Li, Xiaowei Zhan (2018), A Bayesian Zero-Inflated Negative Binomial Regression Model for the Integrative Analysis of Microbiome Data, arXiv:1812.09654. link.

To try our package online, click . In the popped up RStudio webpage, run:

library(IntegrativeBayes)
demo(IntegrativeBayes)

Citation

This paper has been accepted by Biostatistics.

Here is the link https://academic.oup.com/biostatistics/advance-article/doi/10.1093/biostatistics/kxz050/5679577?guestAccessKey=21a53933-2ba6-4786-bfd0-4f23dcddab37

Contact

Shuang Jiang (shuangj@smu.edu), Department of Statistical Science, Southern Methodist University, Dallas, TX 75275