GitHub is home to over 28 million developers working together. Join them to grow your own development teams, manage permissions, and collaborate on projects.
Emergent sub-population behavior uncovered with a community dynamic metabolic model of Escherichia coli diauxic growth
Computational model of photosynthesis resulted from a merge of two previously published mathematical models of relevant subprocesses
Reconstruction of the mathematical model of the photosynthetic electron transport chain using modelbase package
Aa free expandable Python package for building and analysing dynamic mathematical models of biological systems.
Labeling in the non-oxidative pentose phosphate pathway using modelbase
Modelbase implementation of the Poolman 2000 variant of the 1988 Pettersson CBB cycle model
ODE model for P. tricornutum associated microbial community, can be generalized to any system
Pipeline to process 16S (V6) sequence data coming from Ion-Torrent sequencer
Non-photochemical quenching provides short-term light memory in plants: a mathematical model
MATLAB files to simulate in vitro experiments of Integrase with or without Reaction Directionality Factors (RDFs)
Model files to simulate our models on histone gene expression regulation during S-phase
Scripts by Steve Court to generate alternative network structures
Constraint-based model of Paenibacillus polymyxa ICGEB2008
Model of the photosynthetic electron transport chain for Chlamydomonas