Pinned repositories

  1. ImmuneSpaceR

    A thin wrapper around Rlabkey to access the ImmuneSpace database from R

    R 16 8

  2. MAST

    Tools and methods for analysis of single cell assay data in R

    R 57 26

  3. openCyto

    A package that provides data analysis pipeline for flow cytometry.

    HTML 30 15

  4. ggcyto

    Visualize Cytometry data with ggplot2

    R 23 7

  5. flowCore

    Core flow infrastructure

    R 14 9

  6. scamp

    Implementation of Selective Clustering Annotated using Modes of Projections

    C++ 8

  • Java 1 Updated Sep 18, 2018
  • requirements, examples, and tests for expression matrix file formats

    Python 2 MIT Updated Sep 18, 2018
  • ImmuneSpace UI Testing

    R 2 Updated Sep 17, 2018
  • flowWorkspace

    R 24 8 Updated Sep 14, 2018
  • A thin wrapper around Rlabkey to access the ImmuneSpace database from R

    R 16 8 Updated Sep 14, 2018
  • LabKey Modules for ImmuneSpace

    JavaScript 1 3 Artistic-2.0 Updated Sep 14, 2018
  • Core flow infrastructure

    R 14 9 Updated Sep 11, 2018
  • R 4 4 Updated Sep 11, 2018
  • flowStats: algorithms for flow cytometry data analysis using BioConductor tools

    R 7 2 Updated Sep 10, 2018
  • Update Annotation to Latest Symbols using org.Hs.eq.db

    R 1 Updated Sep 5, 2018
  • RNASeq raw read counts and tpm values for BSP2V1 assay

    R Updated Aug 31, 2018
  • RNASeq read counts and tpm for CHMI assay

    R Updated Aug 31, 2018
  • RNASeq raw reads and tpm values for IMRAS project

    R Updated Aug 31, 2018
  • HTML 3 Updated Aug 29, 2018
  • Visualize Cytometry data with ggplot2

    R 23 7 Updated Aug 29, 2018
  • A package that provides data analysis pipeline for flow cytometry.

    HTML 30 15 Updated Aug 29, 2018
  • c++ library for representing and interacting the gated cytometry data structure

    C++ 1 1 Updated Aug 29, 2018
  • bundled Protocol buffers library as an R package

    C++ Updated Aug 29, 2018
  • Tools and methods for analysis of single cell assay data in R

    R 57 26 Updated Aug 27, 2018
  • The R frontend to cytolib c++ library

    R 1 Updated Aug 24, 2018
  • Combinatorial Polyfunctionality Analysis of Single Cells

    R 3 6 Updated Aug 20, 2018
  • An R wrapper around the ImmPort API and its download tool

    R 1 Updated Aug 16, 2018
  • Command line tools for cytolib

    Updated Aug 15, 2018
  • Implementation of Selective Clustering Annotated using Modes of Projections

    C++ 8 Updated Aug 9, 2018
  • A mixture of mixed generalized linear models for analyzing flow cytometry cell-count data.

    HTML 1 1 MIT Updated Aug 1, 2018
  • Tools for preparing ImmPort Submission

    R 1 Updated Jul 26, 2018
  • C++ 1 Updated Jul 24, 2018
  • Bayesian flowClust

    R 3 5 Updated Jul 12, 2018
  • benchmarking the common matrix operations

    R 1 Updated Jun 29, 2018
  • Streamline the processing of RNASeq data

    R 4 7 GPL-3.0 Updated Jun 21, 2018