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@RGLab

RGLab

Raphael Gottardo's Research Lab

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  1. FAUST FAUST Public

    Full annotation using shape-constrained trees

    C++ 25 4

  2. ImmuneSpaceR ImmuneSpaceR Public

    An R Interface to the ImmuneSpace database portal

    R 24 11

  3. flowCore flowCore Public

    Core flow cytometry infrastructure

    R 49 25

  4. openCyto openCyto Public

    A package that provides data analysis pipeline for flow cytometry.

    R 78 30

  5. COMPASS COMPASS Public

    Combinatorial Polyfunctionality Analysis of Single Cells

    R 7 11

  6. MAST MAST Public

    Tools and methods for analysis of single cell assay data in R

    R 240 58

Repositories

Showing 10 of 115 repositories
  • openCyto Public

    A package that provides data analysis pipeline for flow cytometry.

    RGLab/openCyto’s past year of commit activity
    R 78 AGPL-3.0 30 6 12 Updated Mar 26, 2025
  • CytoML Public

    A GatingML Interface for Cross Platform Cytometry Data Sharing

    RGLab/CytoML’s past year of commit activity
    HTML 31 AGPL-3.0 15 52 0 Updated Mar 7, 2025
  • flowWorkspace Public

    flowWorkspace

    RGLab/flowWorkspace’s past year of commit activity
    R 45 AGPL-3.0 20 49 1 Updated Mar 7, 2025
  • COMPASS Public

    Combinatorial Polyfunctionality Analysis of Single Cells

    RGLab/COMPASS’s past year of commit activity
    R 7 11 14 0 Updated Feb 11, 2025
  • cytolib Public

    c++ library for representing and interacting the gated cytometry data structure

    RGLab/cytolib’s past year of commit activity
    C++ 12 AGPL-3.0 12 9 0 Updated Jan 29, 2025
  • ncdfFlow Public

    A package that provides ncdf based storage for flow cytometry data.

    RGLab/ncdfFlow’s past year of commit activity
    R 2 AGPL-3.0 7 3 0 Updated Jan 13, 2025
  • flowCore Public

    Core flow cytometry infrastructure

    RGLab/flowCore’s past year of commit activity
    R 49 25 38 2 Updated Aug 22, 2024
  • MIMOSA2 Public

    Baseline Adjusted Positivity Calls for Intracellular Cytokine Staining Data

    RGLab/MIMOSA2’s past year of commit activity
    R 0 2 0 0 Updated Aug 15, 2024
  • ggcyto Public

    Visualize Cytometry data with ggplot2

    RGLab/ggcyto’s past year of commit activity
    HTML 59 MIT 14 21 0 Updated Mar 2, 2024
  • flowClust Public

    Bayesian flowClust

    RGLab/flowClust’s past year of commit activity
    R 9 7 11 0 Updated Jan 16, 2024
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