Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add mechanism for CellCounts to get all combinations for set of markers #30

Open
kevinushey opened this issue Apr 4, 2014 · 1 comment

Comments

Projects
None yet
1 participant
@kevinushey
Copy link
Member

commented Apr 4, 2014

E.g.,

CellCounts(x, "A*B")

should be identical to

CellCounts(x, c("A&B", "A&!B", "!A&B", "!A&!B"))

ghost pushed a commit that referenced this issue Apr 4, 2014

k.ushey
Commit made by the Bioconductor Git-SVN bridge.
Consists of 4 commit(s).

Commit information:

    Commit id: c1f953e
    Commit message:
    roxygen changed its mind about indentation again, i guess
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:22:43-07:00

    Commit id: effa131
    Commit message:
    Support '*' expansion in CellCounts (#30)
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:23:54-07:00

    Commit id: d095642
    Commit message:
    Merge branch 'master' of https://github.com/RGLab/COMPASS
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:24:12-07:00

    Commit id: 1ffd1bb
    Commit message:
    Update version
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:25:00-07:00

From: Bioconductor Git-SVN Bridge <bioc-sync@bioconductor.org>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/COMPASS@88433 bc3139a8-67e5-0310-9ffc-ced21a209358
@kevinushey

This comment has been minimized.

Copy link
Member Author

commented Apr 4, 2014

Added with #30, but more work would need to be done to combine this with & and | operators.

mikejiang pushed a commit that referenced this issue Sep 11, 2015

k.ushey
Commit made by the Bioconductor Git-SVN bridge.
Consists of 4 commit(s).

Commit information:

    Commit id: c1f953e
    Commit message:
    roxygen changed its mind about indentation again, i guess
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:22:43-07:00

    Commit id: effa131
    Commit message:
    Support '*' expansion in CellCounts (#30)
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:23:54-07:00

    Commit id: d095642
    Commit message:
    Merge branch 'master' of https://github.com/RGLab/COMPASS
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:24:12-07:00

    Commit id: 1ffd1bb
    Commit message:
    Update version
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:25:00-07:00

From: Bioconductor Git-SVN Bridge <bioc-sync@bioconductor.org>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/COMPASS@88433 bc3139a8-67e5-0310-9ffc-ced21a209358

gfinak pushed a commit that referenced this issue Aug 25, 2017

Kevin Ushey
Commit made by the Bioconductor Git-SVN bridge.
Consists of 4 commit(s).

Commit information:

    Commit id: c1f953e
    Commit message:
    roxygen changed its mind about indentation again, i guess
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:22:43-07:00

    Commit id: effa131
    Commit message:
    Support '*' expansion in CellCounts (#30)
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:23:54-07:00

    Commit id: d095642
    Commit message:
    Merge branch 'master' of https://github.com/RGLab/COMPASS
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:24:12-07:00

    Commit id: 1ffd1bb
    Commit message:
    Update version
    Committed by Kevin Ushey <kevinushey at gmail.com>
    Commit date: 2014-04-04T11:25:00-07:00

From: Bioconductor Git-SVN Bridge <bioc-sync@bioconductor.org>

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/COMPASS@88433 bc3139a8-67e5-0310-9ffc-ced21a209358
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
You can’t perform that action at this time.