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🔧rna-tools: a toolbox to analyze structures and simulations of RNA - docs @ http://rna-pdb-tools.rtfd.io & tour @ http://mmagnus.github.io/rna-pdb-tools/#/
A parent project for a set of subprojects related to Mean of Circular Quantities (MCQ).
Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils.
Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/archive/master.zip
Ansible role for RNA-Puzzles Toolkit. Contains ansible-container config and an example playbook
Assessment metrics tools to compare RNA 3D structures.
This repository includes all the submitted RNA structures in RNA-Puzzles, include the `raw_dataset` and the `normalized_dataset`
RNA deformation profile, to account for structure comparison in 2D
The submission format of RNA-Puzzles