@RabadanLab

RabadanLab

  • scTDA

    Forked from pcamara/scTDA

    An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data

    Python 1 Updated Feb 22, 2017
  • SAVI - statistical algorithm for variant identification

    C++ 1 1 Updated Jan 11, 2017
  • Microbial Signatures in Human RNAseq Data

    Python 1 Updated Dec 16, 2016
  • Code to implement the smooth Euler characteristic transform (SECT)

    R Updated Nov 22, 2016
  • Implementation of Mapper Algorithm

    Python 2 Updated Nov 18, 2016
  • Evolutionary Moduli space visualization and statistics

    Python Updated Oct 27, 2016
  • TOBI predicts somatic variants from .vcf or .bam input

    R 1 Updated Oct 3, 2016
  • A wrapper for annotation via blast

    Python Updated Jul 7, 2016
  • TARGet

    Forked from pcamara/TARGet

    Topological inference of horizontal evolution from multiple sequence alignments

    C++ 4 Updated Apr 22, 2016
  • Annotation and Prediction of Oncogenic Gene Fusions in RNAseq

    Java 5 3 Updated Feb 20, 2016
  • Persistent Homology Datasets

    2 Updated Nov 3, 2015
  • Code for "Genetic similarity between cancers and comorbid Mendelian diseases identifies candidate driver genes". View more information in the ipython notebook

    Python 1 3 Updated May 26, 2015
  • Tumor Only Boosting Identification of driver mutations.

    R 3 Updated Jan 9, 2015