diff --git a/internal/ui/dist/assets/cytoscape-cose-bilkent-nxdGmLq9.js b/internal/ui/dist/assets/cytoscape-cose-bilkent-CEIBo6Gj.js similarity index 99% rename from internal/ui/dist/assets/cytoscape-cose-bilkent-nxdGmLq9.js rename to internal/ui/dist/assets/cytoscape-cose-bilkent-CEIBo6Gj.js index f545ac7..654a4ef 100644 --- a/internal/ui/dist/assets/cytoscape-cose-bilkent-nxdGmLq9.js +++ b/internal/ui/dist/assets/cytoscape-cose-bilkent-CEIBo6Gj.js @@ -1 +1 @@ -import{t as e}from"./index-Bi057qLa.js";var t=e(((e,t)=>{(function(n,r){typeof e==`object`&&typeof t==`object`?t.exports=r():typeof define==`function`&&define.amd?define([],r):typeof e==`object`?e.layoutBase=r():n.layoutBase=r()})(e,function(){return(function(e){var t={};function n(r){if(t[r])return t[r].exports;var i=t[r]={i:r,l:!1,exports:{}};return e[r].call(i.exports,i,i.exports,n),i.l=!0,i.exports}return n.m=e,n.c=t,n.i=function(e){return e},n.d=function(e,t,r){n.o(e,t)||Object.defineProperty(e,t,{configurable:!1,enumerable:!0,get:r})},n.n=function(e){var t=e&&e.__esModule?function(){return e.default}:function(){return e};return n.d(t,`a`,t),t},n.o=function(e,t){return Object.prototype.hasOwnProperty.call(e,t)},n.p=``,n(n.s=26)})([(function(e,t,n){function r(){}r.QUALITY=1,r.DEFAULT_CREATE_BENDS_AS_NEEDED=!1,r.DEFAULT_INCREMENTAL=!1,r.DEFAULT_ANIMATION_ON_LAYOUT=!0,r.DEFAULT_ANIMATION_DURING_LAYOUT=!1,r.DEFAULT_ANIMATION_PERIOD=50,r.DEFAULT_UNIFORM_LEAF_NODE_SIZES=!1,r.DEFAULT_GRAPH_MARGIN=15,r.NODE_DIMENSIONS_INCLUDE_LABELS=!1,r.SIMPLE_NODE_SIZE=40,r.SIMPLE_NODE_HALF_SIZE=r.SIMPLE_NODE_SIZE/2,r.EMPTY_COMPOUND_NODE_SIZE=40,r.MIN_EDGE_LENGTH=1,r.WORLD_BOUNDARY=1e6,r.INITIAL_WORLD_BOUNDARY=r.WORLD_BOUNDARY/1e3,r.WORLD_CENTER_X=1200,r.WORLD_CENTER_Y=900,e.exports=r}),(function(e,t,n){var r=n(2),i=n(8),a=n(9);function 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n=this.getOtherEnd(e),r=t.getGraphManager().getRoot();;){if(n.getOwner()==t)return n;if(n.getOwner()==r)break;n=n.getOwner().getParent()}return null},o.prototype.updateLength=function(){var e=[,,,,];this.isOverlapingSourceAndTarget=i.getIntersection(this.target.getRect(),this.source.getRect(),e),this.isOverlapingSourceAndTarget||(this.lengthX=e[0]-e[2],this.lengthY=e[1]-e[3],Math.abs(this.lengthX)<1&&(this.lengthX=a.sign(this.lengthX)),Math.abs(this.lengthY)<1&&(this.lengthY=a.sign(this.lengthY)),this.length=Math.sqrt(this.lengthX*this.lengthX+this.lengthY*this.lengthY))},o.prototype.updateLengthSimple=function(){this.lengthX=this.target.getCenterX()-this.source.getCenterX(),this.lengthY=this.target.getCenterY()-this.source.getCenterY(),Math.abs(this.lengthX)<1&&(this.lengthX=a.sign(this.lengthX)),Math.abs(this.lengthY)<1&&(this.lengthY=a.sign(this.lengthY)),this.length=Math.sqrt(this.lengthX*this.lengthX+this.lengthY*this.lengthY)},e.exports=o}),(function(e,t,n){function 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this.rect.y+this.rect.height/2},l.prototype.getCenter=function(){return new c(this.rect.x+this.rect.width/2,this.rect.y+this.rect.height/2)},l.prototype.getLocation=function(){return new c(this.rect.x,this.rect.y)},l.prototype.getRect=function(){return this.rect},l.prototype.getDiagonal=function(){return Math.sqrt(this.rect.width*this.rect.width+this.rect.height*this.rect.height)},l.prototype.getHalfTheDiagonal=function(){return Math.sqrt(this.rect.height*this.rect.height+this.rect.width*this.rect.width)/2},l.prototype.setRect=function(e,t){this.rect.x=e.x,this.rect.y=e.y,this.rect.width=t.width,this.rect.height=t.height},l.prototype.setCenter=function(e,t){this.rect.x=e-this.rect.width/2,this.rect.y=t-this.rect.height/2},l.prototype.setLocation=function(e,t){this.rect.x=e,this.rect.y=t},l.prototype.moveBy=function(e,t){this.rect.x+=e,this.rect.y+=t},l.prototype.getEdgeListToNode=function(e){var t=[],n=this;return n.edges.forEach(function(r){if(r.target==e){if(r.source!=n)throw`Incorrect edge source!`;t.push(r)}}),t},l.prototype.getEdgesBetween=function(e){var t=[],n=this;return n.edges.forEach(function(r){if(!(r.source==n||r.target==n))throw`Incorrect edge source and/or target`;(r.target==e||r.source==e)&&t.push(r)}),t},l.prototype.getNeighborsList=function(){var e=new Set,t=this;return t.edges.forEach(function(n){if(n.source==t)e.add(n.target);else{if(n.target!=t)throw`Incorrect incidency!`;e.add(n.source)}}),e},l.prototype.withChildren=function(){var e=new Set,t,n;if(e.add(this),this.child!=null)for(var r=this.child.getNodes(),i=0;it&&(this.rect.x-=(this.labelWidth-t)/2,this.setWidth(this.labelWidth)),this.labelHeight>n&&(this.labelPos==`center`?this.rect.y-=(this.labelHeight-n)/2:this.labelPos==`top`&&(this.rect.y-=this.labelHeight-n),this.setHeight(this.labelHeight))}}},l.prototype.getInclusionTreeDepth=function(){if(this.inclusionTreeDepth==i.MAX_VALUE)throw`assert failed`;return 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e=this.layout.newGraph(),t=this.layout.newNode(null),n=this.add(e,t);return this.setRootGraph(n),this.rootGraph},a.prototype.add=function(e,t,n,r,i){if(n==null&&r==null&&i==null){if(e==null)throw`Graph is null!`;if(t==null)throw`Parent node is null!`;if(this.graphs.indexOf(e)>-1)throw`Graph already in this graph mgr!`;if(this.graphs.push(e),e.parent!=null)throw`Already has a parent!`;if(t.child!=null)throw`Already has a child!`;return e.parent=t,t.child=e,e}else{i=n,r=t,n=e;var a=r.getOwner(),o=i.getOwner();if(!(a!=null&&a.getGraphManager()==this))throw`Source not in this graph mgr!`;if(!(o!=null&&o.getGraphManager()==this))throw`Target not in this graph mgr!`;if(a==o)return n.isInterGraph=!1,a.add(n,r,i);if(n.isInterGraph=!0,n.source=r,n.target=i,this.edges.indexOf(n)>-1)throw`Edge already in inter-graph edge list!`;if(this.edges.push(n),!(n.source!=null&&n.target!=null))throw`Edge source and/or target is 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a=Math.abs((t.getCenterY()-e.getCenterY())/(t.getCenterX()-e.getCenterX()));t.getCenterY()===e.getCenterY()&&t.getCenterX()===e.getCenterX()&&(a=1);var o=a*n[0],s=n[1]/a;n[0]o)return n[0]=r,n[1]=c,n[2]=a,n[3]=y,!1;if(ia)return n[0]=s,n[1]=i,n[2]=_,n[3]=o,!1;if(ra?(n[0]=u,n[1]=d,C=!0):(n[0]=l,n[1]=c,C=!0):T===D&&(r>a?(n[0]=s,n[1]=c,C=!0):(n[0]=f,n[1]=d,C=!0)),-E===D?a>r?(n[2]=v,n[3]=y,w=!0):(n[2]=_,n[3]=g,w=!0):E===D&&(a>r?(n[2]=h,n[3]=g,w=!0):(n[2]=b,n[3]=y,w=!0)),C&&w)return!1;if(r>a?i>o?(O=this.getCardinalDirection(T,D,4),k=this.getCardinalDirection(E,D,2)):(O=this.getCardinalDirection(-T,D,3),k=this.getCardinalDirection(-E,D,1)):i>o?(O=this.getCardinalDirection(-T,D,1),k=this.getCardinalDirection(-E,D,3)):(O=this.getCardinalDirection(T,D,2),k=this.getCardinalDirection(E,D,4)),!C)switch(O){case 1:j=c,A=r+-m/D,n[0]=A,n[1]=j;break;case 2:A=f,j=i+p*D,n[0]=A,n[1]=j;break;case 3:j=d,A=r+m/D,n[0]=A,n[1]=j;break;case 4:A=u,j=i+-p*D,n[0]=A,n[1]=j;break}if(!w)switch(k){case 1:N=g,M=a+-S/D,n[2]=M,n[3]=N;break;case 2:M=b,N=o+x*D,n[2]=M,n[3]=N;break;case 3:N=y,M=a+S/D,n[2]=M,n[3]=N;break;case 4:M=v,N=o+-x*D,n[2]=M,n[3]=N;break}}return!1},i.getCardinalDirection=function(e,t,n){return e>t?n:1+n%4},i.getIntersection=function(e,t,n,i){if(i==null)return this.getIntersection2(e,t,n);var a=e.x,o=e.y,s=t.x,c=t.y,l=n.x,u=n.y,d=i.x,f=i.y,p=void 0,m=void 0,h=void 0,g=void 0,_=void 0,v=void 0,y=void 0,b=void 0,x=void 0;return h=c-o,_=a-s,y=s*o-a*c,g=f-u,v=l-d,b=d*u-l*f,x=h*v-g*_,x===0?null:(p=(_*b-v*y)/x,m=(g*y-h*b)/x,new r(p,m))},i.angleOfVector=function(e,t,n,r){var i=void 0;return e===n?i=r0?1:e<0?-1:0},r.floor=function(e){return e<0?Math.ceil(e):Math.floor(e)},r.ceil=function(e){return e<0?Math.floor(e):Math.ceil(e)},e.exports=r}),(function(e,t,n){function r(){}r.MAX_VALUE=2147483647,r.MIN_VALUE=-2147483648,e.exports=r}),(function(e,t,n){var r=function(){function e(e,t){for(var n=0;n0&&t;){for(s.push(l[0]);s.length>0&&t;){var u=s[0];s.splice(0,1),o.add(u);for(var d=u.getEdges(),a=0;a-1&&l.splice(h,1)}o=new Set,c=new Map}}return e},f.prototype.createDummyNodesForBendpoints=function(e){for(var t=[],n=e.source,r=this.graphManager.calcLowestCommonAncestor(e.source,e.target),i=0;i0){for(var i=this.edgeToDummyNodes.get(n),a=0;a=0&&t.splice(d,1),s.getNeighborsList().forEach(function(e){if(n.indexOf(e)<0){var t=r.get(e)-1;t==1&&l.push(e),r.set(e,t)}})}n=n.concat(l),(t.length==1||t.length==2)&&(i=!0,a=t[0])}return a},f.prototype.setGraphManager=function(e){this.graphManager=e},e.exports=f}),(function(e,t,n){function r(){}r.seed=1,r.x=0,r.nextDouble=function(){return r.x=Math.sin(r.seed++)*1e4,r.x-Math.floor(r.x)},e.exports=r}),(function(e,t,n){var r=n(4);function i(e,t){this.lworldOrgX=0,this.lworldOrgY=0,this.ldeviceOrgX=0,this.ldeviceOrgY=0,this.lworldExtX=1,this.lworldExtY=1,this.ldeviceExtX=1,this.ldeviceExtY=1}i.prototype.getWorldOrgX=function(){return this.lworldOrgX},i.prototype.setWorldOrgX=function(e){this.lworldOrgX=e},i.prototype.getWorldOrgY=function(){return this.lworldOrgY},i.prototype.setWorldOrgY=function(e){this.lworldOrgY=e},i.prototype.getWorldExtX=function(){return this.lworldExtX},i.prototype.setWorldExtX=function(e){this.lworldExtX=e},i.prototype.getWorldExtY=function(){return this.lworldExtY},i.prototype.setWorldExtY=function(e){this.lworldExtY=e},i.prototype.getDeviceOrgX=function(){return this.ldeviceOrgX},i.prototype.setDeviceOrgX=function(e){this.ldeviceOrgX=e},i.prototype.getDeviceOrgY=function(){return this.ldeviceOrgY},i.prototype.setDeviceOrgY=function(e){this.ldeviceOrgY=e},i.prototype.getDeviceExtX=function(){return this.ldeviceExtX},i.prototype.setDeviceExtX=function(e){this.ldeviceExtX=e},i.prototype.getDeviceExtY=function(){return this.ldeviceExtY},i.prototype.setDeviceExtY=function(e){this.ldeviceExtY=e},i.prototype.transformX=function(e){var t=0,n=this.lworldExtX;return n!=0&&(t=this.ldeviceOrgX+(e-this.lworldOrgX)*this.ldeviceExtX/n),t},i.prototype.transformY=function(e){var t=0,n=this.lworldExtY;return n!=0&&(t=this.ldeviceOrgY+(e-this.lworldOrgY)*this.ldeviceExtY/n),t},i.prototype.inverseTransformX=function(e){var t=0,n=this.ldeviceExtX;return n!=0&&(t=this.lworldOrgX+(e-this.ldeviceOrgX)*this.lworldExtX/n),t},i.prototype.inverseTransformY=function(e){var t=0,n=this.ldeviceExtY;return n!=0&&(t=this.lworldOrgY+(e-this.ldeviceOrgY)*this.lworldExtY/n),t},i.prototype.inverseTransformPoint=function(e){return new r(this.inverseTransformX(e.x),this.inverseTransformY(e.y))},e.exports=i}),(function(e,t,n){function r(e){if(Array.isArray(e)){for(var t=0,n=Array(e.length);ta.ADAPTATION_LOWER_NODE_LIMIT&&(this.coolingFactor=Math.max(this.coolingFactor*a.COOLING_ADAPTATION_FACTOR,this.coolingFactor-(e-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*this.coolingFactor*(1-a.COOLING_ADAPTATION_FACTOR))),this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT_INCREMENTAL):(e>a.ADAPTATION_LOWER_NODE_LIMIT?this.coolingFactor=Math.max(a.COOLING_ADAPTATION_FACTOR,1-(e-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*(1-a.COOLING_ADAPTATION_FACTOR)):this.coolingFactor=1,this.initialCoolingFactor=this.coolingFactor,this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT),this.maxIterations=Math.max(this.getAllNodes().length*5,this.maxIterations),this.totalDisplacementThreshold=this.displacementThresholdPerNode*this.getAllNodes().length,this.repulsionRange=this.calcRepulsionRange()},l.prototype.calcSpringForces=function(){for(var e=this.getAllEdges(),t,n=0;n0&&arguments[0]!==void 0?arguments[0]:!0,t=arguments.length>1&&arguments[1]!==void 0?arguments[1]:!1,n,r,i,o,s=this.getAllNodes(),c;if(this.useFRGridVariant)for(this.totalIterations%a.GRID_CALCULATION_CHECK_PERIOD==1&&e&&this.updateGrid(),c=new Set,n=0;nc||s>c)&&(e.gravitationForceX=-this.gravityConstant*i,e.gravitationForceY=-this.gravityConstant*a)):(c=t.getEstimatedSize()*this.compoundGravityRangeFactor,(o>c||s>c)&&(e.gravitationForceX=-this.gravityConstant*i*this.compoundGravityConstant,e.gravitationForceY=-this.gravityConstant*a*this.compoundGravityConstant))},l.prototype.isConverged=function(){var e,t=!1;return this.totalIterations>this.maxIterations/3&&(t=Math.abs(this.totalDisplacement-this.oldTotalDisplacement)<2),e=this.totalDisplacement=c.length||u>=c[0].length)){for(var d=0;de}}]),e}()}),(function(e,t,n){var r=function(){function e(e,t){for(var n=0;n2&&arguments[2]!==void 0?arguments[2]:1,a=arguments.length>3&&arguments[3]!==void 0?arguments[3]:-1,o=arguments.length>4&&arguments[4]!==void 0?arguments[4]:-1;i(this,e),this.sequence1=t,this.sequence2=n,this.match_score=r,this.mismatch_penalty=a,this.gap_penalty=o,this.iMax=t.length+1,this.jMax=n.length+1,this.grid=Array(this.iMax);for(var s=0;s=0;n--){var r=this.listeners[n];r.event===e&&r.callback===t&&this.listeners.splice(n,1)}},i.emit=function(e,t){for(var n=0;n{(function(r,i){typeof e==`object`&&typeof n==`object`?n.exports=i(t()):typeof define==`function`&&define.amd?define([`layout-base`],i):typeof e==`object`?e.coseBase=i(t()):r.coseBase=i(r.layoutBase)})(e,function(e){return(function(e){var t={};function n(r){if(t[r])return t[r].exports;var i=t[r]={i:r,l:!1,exports:{}};return e[r].call(i.exports,i,i.exports,n),i.l=!0,i.exports}return n.m=e,n.c=t,n.i=function(e){return e},n.d=function(e,t,r){n.o(e,t)||Object.defineProperty(e,t,{configurable:!1,enumerable:!0,get:r})},n.n=function(e){var t=e&&e.__esModule?function(){return e.default}:function(){return e};return n.d(t,`a`,t),t},n.o=function(e,t){return Object.prototype.hasOwnProperty.call(e,t)},n.p=``,n(n.s=7)})([(function(t,n){t.exports=e}),(function(e,t,n){var r=n(0).FDLayoutConstants;function i(){}for(var a in r)i[a]=r[a];i.DEFAULT_USE_MULTI_LEVEL_SCALING=!1,i.DEFAULT_RADIAL_SEPARATION=r.DEFAULT_EDGE_LENGTH,i.DEFAULT_COMPONENT_SEPERATION=60,i.TILE=!0,i.TILING_PADDING_VERTICAL=10,i.TILING_PADDING_HORIZONTAL=10,i.TREE_REDUCTION_ON_INCREMENTAL=!1,e.exports=i}),(function(e,t,n){var r=n(0).FDLayoutEdge;function i(e,t,n){r.call(this,e,t,n)}for(var a in i.prototype=Object.create(r.prototype),r)i[a]=r[a];e.exports=i}),(function(e,t,n){var r=n(0).LGraph;function i(e,t,n){r.call(this,e,t,n)}for(var a in i.prototype=Object.create(r.prototype),r)i[a]=r[a];e.exports=i}),(function(e,t,n){var r=n(0).LGraphManager;function i(e){r.call(this,e)}for(var a in i.prototype=Object.create(r.prototype),r)i[a]=r[a];e.exports=i}),(function(e,t,n){var r=n(0).FDLayoutNode,i=n(0).IMath;function a(e,t,n,i){r.call(this,e,t,n,i)}for(var o in a.prototype=Object.create(r.prototype),r)a[o]=r[o];a.prototype.move=function(){var e=this.graphManager.getLayout();this.displacementX=e.coolingFactor*(this.springForceX+this.repulsionForceX+this.gravitationForceX)/this.noOfChildren,this.displacementY=e.coolingFactor*(this.springForceY+this.repulsionForceY+this.gravitationForceY)/this.noOfChildren,Math.abs(this.displacementX)>e.coolingFactor*e.maxNodeDisplacement&&(this.displacementX=e.coolingFactor*e.maxNodeDisplacement*i.sign(this.displacementX)),Math.abs(this.displacementY)>e.coolingFactor*e.maxNodeDisplacement&&(this.displacementY=e.coolingFactor*e.maxNodeDisplacement*i.sign(this.displacementY)),this.child==null||this.child.getNodes().length==0?this.moveBy(this.displacementX,this.displacementY):this.propogateDisplacementToChildren(this.displacementX,this.displacementY),e.totalDisplacement+=Math.abs(this.displacementX)+Math.abs(this.displacementY),this.springForceX=0,this.springForceY=0,this.repulsionForceX=0,this.repulsionForceY=0,this.gravitationForceX=0,this.gravitationForceY=0,this.displacementX=0,this.displacementY=0},a.prototype.propogateDisplacementToChildren=function(e,t){for(var n=this.getChild().getNodes(),r,i=0;i0)this.positionNodesRadially(e);else{this.reduceTrees(),this.graphManager.resetAllNodesToApplyGravitation();var t=new Set(this.getAllNodes()),n=this.nodesWithGravity.filter(function(e){return t.has(e)});this.graphManager.setAllNodesToApplyGravitation(n),this.positionNodesRandomly()}}else if(c.TREE_REDUCTION_ON_INCREMENTAL){this.reduceTrees(),this.graphManager.resetAllNodesToApplyGravitation();var t=new Set(this.getAllNodes()),n=this.nodesWithGravity.filter(function(e){return t.has(e)});this.graphManager.setAllNodesToApplyGravitation(n)}return this.initSpringEmbedder(),this.runSpringEmbedder(),!0},v.prototype.tick=function(){if(this.totalIterations++,this.totalIterations===this.maxIterations&&!this.isTreeGrowing&&!this.isGrowthFinished)if(this.prunedNodesAll.length>0)this.isTreeGrowing=!0;else return!0;if(this.totalIterations%l.CONVERGENCE_CHECK_PERIOD==0&&!this.isTreeGrowing&&!this.isGrowthFinished){if(this.isConverged())if(this.prunedNodesAll.length>0)this.isTreeGrowing=!0;else return!0;this.coolingCycle++,this.layoutQuality==0?this.coolingAdjuster=this.coolingCycle:this.layoutQuality==1&&(this.coolingAdjuster=this.coolingCycle/3),this.coolingFactor=Math.max(this.initialCoolingFactor-this.coolingCycle**+(Math.log(100*(this.initialCoolingFactor-this.finalTemperature))/Math.log(this.maxCoolingCycle))/100*this.coolingAdjuster,this.finalTemperature),this.animationPeriod=Math.ceil(this.initialAnimationPeriod*Math.sqrt(this.coolingFactor))}if(this.isTreeGrowing){if(this.growTreeIterations%10==0)if(this.prunedNodesAll.length>0){this.graphManager.updateBounds(),this.updateGrid(),this.growTree(this.prunedNodesAll),this.graphManager.resetAllNodesToApplyGravitation();var e=new Set(this.getAllNodes()),t=this.nodesWithGravity.filter(function(t){return e.has(t)});this.graphManager.setAllNodesToApplyGravitation(t),this.graphManager.updateBounds(),this.updateGrid(),this.coolingFactor=l.DEFAULT_COOLING_FACTOR_INCREMENTAL}else this.isTreeGrowing=!1,this.isGrowthFinished=!0;this.growTreeIterations++}if(this.isGrowthFinished){if(this.isConverged())return!0;this.afterGrowthIterations%10==0&&(this.graphManager.updateBounds(),this.updateGrid()),this.coolingFactor=l.DEFAULT_COOLING_FACTOR_INCREMENTAL*((100-this.afterGrowthIterations)/100),this.afterGrowthIterations++}var n=!this.isTreeGrowing&&!this.isGrowthFinished,r=this.growTreeIterations%10==1&&this.isTreeGrowing||this.afterGrowthIterations%10==1&&this.isGrowthFinished;return this.totalDisplacement=0,this.graphManager.updateBounds(),this.calcSpringForces(),this.calcRepulsionForces(n,r),this.calcGravitationalForces(),this.moveNodes(),this.animate(),!1},v.prototype.getPositionsData=function(){for(var e=this.graphManager.getAllNodes(),t={},n=0;n1){var s;for(s=0;sr&&(r=Math.floor(o.y)),a=Math.floor(o.x+c.DEFAULT_COMPONENT_SEPERATION)}this.transform(new f(u.WORLD_CENTER_X-o.x/2,u.WORLD_CENTER_Y-o.y/2))},v.radialLayout=function(e,t,n){var r=Math.max(this.maxDiagonalInTree(e),c.DEFAULT_RADIAL_SEPARATION);v.branchRadialLayout(t,null,0,359,0,r);var i=g.calculateBounds(e),a=new _;a.setDeviceOrgX(i.getMinX()),a.setDeviceOrgY(i.getMinY()),a.setWorldOrgX(n.x),a.setWorldOrgY(n.y);for(var o=0;o1;){var _=g[0];g.splice(0,1);var y=u.indexOf(_);y>=0&&u.splice(y,1),p--,d--}m=t==null?0:(u.indexOf(g[0])+1)%p;for(var b=Math.abs(r-n)/d,x=m;f!=d;x=++x%p){var S=u[x].getOtherEnd(e);if(S!=t){var C=(n+f*b)%360,w=(C+b)%360;v.branchRadialLayout(S,e,C,w,i+a,a),f++}}},v.maxDiagonalInTree=function(e){for(var t=m.MIN_VALUE,n=0;nt&&(t=r)}return t},v.prototype.calcRepulsionRange=function(){return 2*(this.level+1)*this.idealEdgeLength},v.prototype.groupZeroDegreeMembers=function(){var e=this,t={};this.memberGroups={},this.idToDummyNode={};for(var n=[],r=this.graphManager.getAllNodes(),i=0;i1){var r=`DummyCompound_`+n;e.memberGroups[r]=t[n];var i=t[n][0].getParent(),a=new o(e.graphManager);a.id=r,a.paddingLeft=i.paddingLeft||0,a.paddingRight=i.paddingRight||0,a.paddingBottom=i.paddingBottom||0,a.paddingTop=i.paddingTop||0,e.idToDummyNode[r]=a;var s=e.getGraphManager().add(e.newGraph(),a),c=i.getChild();c.add(a);for(var l=0;l=0;e--){var t=this.compoundOrder[e],n=t.id,r=t.paddingLeft,i=t.paddingTop;this.adjustLocations(this.tiledMemberPack[n],t.rect.x,t.rect.y,r,i)}},v.prototype.repopulateZeroDegreeMembers=function(){var e=this,t=this.tiledZeroDegreePack;Object.keys(t).forEach(function(n){var r=e.idToDummyNode[n],i=r.paddingLeft,a=r.paddingTop;e.adjustLocations(t[n],r.rect.x,r.rect.y,i,a)})},v.prototype.getToBeTiled=function(e){var t=e.id;if(this.toBeTiled[t]!=null)return this.toBeTiled[t];var n=e.getChild();if(n==null)return this.toBeTiled[t]=!1,!1;for(var r=n.getNodes(),i=0;i0)return this.toBeTiled[t]=!1,!1;if(a.getChild()==null){this.toBeTiled[a.id]=!1;continue}if(!this.getToBeTiled(a))return this.toBeTiled[t]=!1,!1}return this.toBeTiled[t]=!0,!0},v.prototype.getNodeDegree=function(e){e.id;for(var t=e.getEdges(),n=0,r=0;rc&&(c=u.rect.height)}n+=c+e.verticalPadding}},v.prototype.tileCompoundMembers=function(e,t){var n=this;this.tiledMemberPack=[],Object.keys(e).forEach(function(r){var i=t[r];n.tiledMemberPack[r]=n.tileNodes(e[r],i.paddingLeft+i.paddingRight),i.rect.width=n.tiledMemberPack[r].width,i.rect.height=n.tiledMemberPack[r].height})},v.prototype.tileNodes=function(e,t){var n={rows:[],rowWidth:[],rowHeight:[],width:0,height:t,verticalPadding:c.TILING_PADDING_VERTICAL,horizontalPadding:c.TILING_PADDING_HORIZONTAL};e.sort(function(e,t){return e.rect.width*e.rect.height>t.rect.width*t.rect.height?-1:+(e.rect.width*e.rect.height0&&(a+=e.horizontalPadding),e.rowWidth[n]=a,e.width0&&(o+=e.verticalPadding);var s=0;o>e.rowHeight[n]&&(s=e.rowHeight[n],e.rowHeight[n]=o,s=e.rowHeight[n]-s),e.height+=s,e.rows[n].push(t)},v.prototype.getShortestRowIndex=function(e){for(var t=-1,n=Number.MAX_VALUE,r=0;rn&&(t=r,n=e.rowWidth[r]);return t},v.prototype.canAddHorizontal=function(e,t,n){var r=this.getShortestRowIndex(e);if(r<0)return!0;var i=e.rowWidth[r];if(i+e.horizontalPadding+t<=e.width)return!0;var a=0;e.rowHeight[r]0&&(a=n+e.verticalPadding-e.rowHeight[r]);var o=e.width-i>=t+e.horizontalPadding?(e.height+a)/(i+t+e.horizontalPadding):(e.height+a)/e.width;a=n+e.verticalPadding;var s=e.widtha&&t!=n){r.splice(-1,1),e.rows[n].push(i),e.rowWidth[t]=e.rowWidth[t]-a,e.rowWidth[n]=e.rowWidth[n]+a,e.width=e.rowWidth[instance.getLongestRowIndex(e)];for(var o=Number.MIN_VALUE,s=0;so&&(o=r[s].height);t>0&&(o+=e.verticalPadding);var c=e.rowHeight[t]+e.rowHeight[n];e.rowHeight[t]=o,e.rowHeight[n]0)for(var u=i;u<=a;u++)c[0]+=this.grid[u][o-1].length+this.grid[u][o].length-1;if(a0)for(var u=o;u<=s;u++)c[3]+=this.grid[i-1][u].length+this.grid[i][u].length-1;for(var d=m.MAX_VALUE,f,p,h=0;h{(function(r,i){typeof e==`object`&&typeof t==`object`?t.exports=i(n()):typeof define==`function`&&define.amd?define([`cose-base`],i):typeof e==`object`?e.cytoscapeCoseBilkent=i(n()):r.cytoscapeCoseBilkent=i(r.coseBase)})(e,function(e){return(function(e){var t={};function n(r){if(t[r])return t[r].exports;var i=t[r]={i:r,l:!1,exports:{}};return e[r].call(i.exports,i,i.exports,n),i.l=!0,i.exports}return n.m=e,n.c=t,n.i=function(e){return e},n.d=function(e,t,r){n.o(e,t)||Object.defineProperty(e,t,{configurable:!1,enumerable:!0,get:r})},n.n=function(e){var t=e&&e.__esModule?function(){return e.default}:function(){return e};return n.d(t,`a`,t),t},n.o=function(e,t){return Object.prototype.hasOwnProperty.call(e,t)},n.p=``,n(n.s=1)})([(function(t,n){t.exports=e}),(function(e,t,n){var r=n(0).layoutBase.LayoutConstants,i=n(0).layoutBase.FDLayoutConstants,a=n(0).CoSEConstants,o=n(0).CoSELayout,s=n(0).CoSENode,c=n(0).layoutBase.PointD,l=n(0).layoutBase.DimensionD,u={ready:function(){},stop:function(){},quality:`default`,nodeDimensionsIncludeLabels:!1,refresh:30,fit:!0,padding:10,randomize:!0,nodeRepulsion:4500,idealEdgeLength:50,edgeElasticity:.45,nestingFactor:.1,gravity:.25,numIter:2500,tile:!0,animate:`end`,animationDuration:500,tilingPaddingVertical:10,tilingPaddingHorizontal:10,gravityRangeCompound:1.5,gravityCompound:1,gravityRange:3.8,initialEnergyOnIncremental:.5};function d(e,t){var n={};for(var r in e)n[r]=e[r];for(var r in t)n[r]=t[r];return n}function f(e){this.options=d(u,e),p(this.options)}var p=function(e){e.nodeRepulsion!=null&&(a.DEFAULT_REPULSION_STRENGTH=i.DEFAULT_REPULSION_STRENGTH=e.nodeRepulsion),e.idealEdgeLength!=null&&(a.DEFAULT_EDGE_LENGTH=i.DEFAULT_EDGE_LENGTH=e.idealEdgeLength),e.edgeElasticity!=null&&(a.DEFAULT_SPRING_STRENGTH=i.DEFAULT_SPRING_STRENGTH=e.edgeElasticity),e.nestingFactor!=null&&(a.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR=i.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR=e.nestingFactor),e.gravity!=null&&(a.DEFAULT_GRAVITY_STRENGTH=i.DEFAULT_GRAVITY_STRENGTH=e.gravity),e.numIter!=null&&(a.MAX_ITERATIONS=i.MAX_ITERATIONS=e.numIter),e.gravityRange!=null&&(a.DEFAULT_GRAVITY_RANGE_FACTOR=i.DEFAULT_GRAVITY_RANGE_FACTOR=e.gravityRange),e.gravityCompound!=null&&(a.DEFAULT_COMPOUND_GRAVITY_STRENGTH=i.DEFAULT_COMPOUND_GRAVITY_STRENGTH=e.gravityCompound),e.gravityRangeCompound!=null&&(a.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR=i.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR=e.gravityRangeCompound),e.initialEnergyOnIncremental!=null&&(a.DEFAULT_COOLING_FACTOR_INCREMENTAL=i.DEFAULT_COOLING_FACTOR_INCREMENTAL=e.initialEnergyOnIncremental),e.quality==`draft`?r.QUALITY=0:e.quality==`proof`?r.QUALITY=2:r.QUALITY=1,a.NODE_DIMENSIONS_INCLUDE_LABELS=i.NODE_DIMENSIONS_INCLUDE_LABELS=r.NODE_DIMENSIONS_INCLUDE_LABELS=e.nodeDimensionsIncludeLabels,a.DEFAULT_INCREMENTAL=i.DEFAULT_INCREMENTAL=r.DEFAULT_INCREMENTAL=!e.randomize,a.ANIMATE=i.ANIMATE=r.ANIMATE=e.animate,a.TILE=e.tile,a.TILING_PADDING_VERTICAL=typeof e.tilingPaddingVertical==`function`?e.tilingPaddingVertical.call():e.tilingPaddingVertical,a.TILING_PADDING_HORIZONTAL=typeof e.tilingPaddingHorizontal==`function`?e.tilingPaddingHorizontal.call():e.tilingPaddingHorizontal};f.prototype.run=function(){var e,t,n=this.options;this.idToLNode={};var r=this.layout=new o,i=this;i.stopped=!1,this.cy=this.options.cy,this.cy.trigger({type:`layoutstart`,layout:this});var a=r.newGraphManager();this.gm=a;var s=this.options.eles.nodes(),c=this.options.eles.edges();this.root=a.addRoot(),this.processChildrenList(this.root,this.getTopMostNodes(s),r);for(var l=0;l0){var h=n.getGraphManager().add(n.newGraph(),u);this.processChildrenList(h,o,n)}}},f.prototype.stop=function(){return this.stopped=!0,this};var m=function(e){e(`layout`,`cose-bilkent`,f)};typeof cytoscape<`u`&&m(cytoscape),e.exports=m})])})}));export default r(); \ No newline at end of file +import{t as e}from"./index-B9ZFj2IV.js";var t=e(((e,t)=>{(function(n,r){typeof e==`object`&&typeof t==`object`?t.exports=r():typeof define==`function`&&define.amd?define([],r):typeof e==`object`?e.layoutBase=r():n.layoutBase=r()})(e,function(){return(function(e){var t={};function n(r){if(t[r])return t[r].exports;var i=t[r]={i:r,l:!1,exports:{}};return e[r].call(i.exports,i,i.exports,n),i.l=!0,i.exports}return n.m=e,n.c=t,n.i=function(e){return e},n.d=function(e,t,r){n.o(e,t)||Object.defineProperty(e,t,{configurable:!1,enumerable:!0,get:r})},n.n=function(e){var t=e&&e.__esModule?function(){return e.default}:function(){return e};return n.d(t,`a`,t),t},n.o=function(e,t){return Object.prototype.hasOwnProperty.call(e,t)},n.p=``,n(n.s=26)})([(function(e,t,n){function r(){}r.QUALITY=1,r.DEFAULT_CREATE_BENDS_AS_NEEDED=!1,r.DEFAULT_INCREMENTAL=!1,r.DEFAULT_ANIMATION_ON_LAYOUT=!0,r.DEFAULT_ANIMATION_DURING_LAYOUT=!1,r.DEFAULT_ANIMATION_PERIOD=50,r.DEFAULT_UNIFORM_LEAF_NODE_SIZES=!1,r.DEFAULT_GRAPH_MARGIN=15,r.NODE_DIMENSIONS_INCLUDE_LABELS=!1,r.SIMPLE_NODE_SIZE=40,r.SIMPLE_NODE_HALF_SIZE=r.SIMPLE_NODE_SIZE/2,r.EMPTY_COMPOUND_NODE_SIZE=40,r.MIN_EDGE_LENGTH=1,r.WORLD_BOUNDARY=1e6,r.INITIAL_WORLD_BOUNDARY=r.WORLD_BOUNDARY/1e3,r.WORLD_CENTER_X=1200,r.WORLD_CENTER_Y=900,e.exports=r}),(function(e,t,n){var r=n(2),i=n(8),a=n(9);function o(e,t,n){r.call(this,n),this.isOverlapingSourceAndTarget=!1,this.vGraphObject=n,this.bendpoints=[],this.source=e,this.target=t}for(var s in o.prototype=Object.create(r.prototype),r)o[s]=r[s];o.prototype.getSource=function(){return this.source},o.prototype.getTarget=function(){return this.target},o.prototype.isInterGraph=function(){return this.isInterGraph},o.prototype.getLength=function(){return this.length},o.prototype.isOverlapingSourceAndTarget=function(){return this.isOverlapingSourceAndTarget},o.prototype.getBendpoints=function(){return this.bendpoints},o.prototype.getLca=function(){return this.lca},o.prototype.getSourceInLca=function(){return this.sourceInLca},o.prototype.getTargetInLca=function(){return this.targetInLca},o.prototype.getOtherEnd=function(e){if(this.source===e)return this.target;if(this.target===e)return this.source;throw`Node is not incident with this edge`},o.prototype.getOtherEndInGraph=function(e,t){for(var n=this.getOtherEnd(e),r=t.getGraphManager().getRoot();;){if(n.getOwner()==t)return n;if(n.getOwner()==r)break;n=n.getOwner().getParent()}return null},o.prototype.updateLength=function(){var e=[,,,,];this.isOverlapingSourceAndTarget=i.getIntersection(this.target.getRect(),this.source.getRect(),e),this.isOverlapingSourceAndTarget||(this.lengthX=e[0]-e[2],this.lengthY=e[1]-e[3],Math.abs(this.lengthX)<1&&(this.lengthX=a.sign(this.lengthX)),Math.abs(this.lengthY)<1&&(this.lengthY=a.sign(this.lengthY)),this.length=Math.sqrt(this.lengthX*this.lengthX+this.lengthY*this.lengthY))},o.prototype.updateLengthSimple=function(){this.lengthX=this.target.getCenterX()-this.source.getCenterX(),this.lengthY=this.target.getCenterY()-this.source.getCenterY(),Math.abs(this.lengthX)<1&&(this.lengthX=a.sign(this.lengthX)),Math.abs(this.lengthY)<1&&(this.lengthY=a.sign(this.lengthY)),this.length=Math.sqrt(this.lengthX*this.lengthX+this.lengthY*this.lengthY)},e.exports=o}),(function(e,t,n){function r(e){this.vGraphObject=e}e.exports=r}),(function(e,t,n){var r=n(2),i=n(10),a=n(13),o=n(0),s=n(16),c=n(4);function l(e,t,n,o){n==null&&o==null&&(o=t),r.call(this,o),e.graphManager!=null&&(e=e.graphManager),this.estimatedSize=i.MIN_VALUE,this.inclusionTreeDepth=i.MAX_VALUE,this.vGraphObject=o,this.edges=[],this.graphManager=e,n!=null&&t!=null?this.rect=new a(t.x,t.y,n.width,n.height):this.rect=new a}for(var u in l.prototype=Object.create(r.prototype),r)l[u]=r[u];l.prototype.getEdges=function(){return this.edges},l.prototype.getChild=function(){return this.child},l.prototype.getOwner=function(){return this.owner},l.prototype.getWidth=function(){return this.rect.width},l.prototype.setWidth=function(e){this.rect.width=e},l.prototype.getHeight=function(){return this.rect.height},l.prototype.setHeight=function(e){this.rect.height=e},l.prototype.getCenterX=function(){return this.rect.x+this.rect.width/2},l.prototype.getCenterY=function(){return this.rect.y+this.rect.height/2},l.prototype.getCenter=function(){return new c(this.rect.x+this.rect.width/2,this.rect.y+this.rect.height/2)},l.prototype.getLocation=function(){return new c(this.rect.x,this.rect.y)},l.prototype.getRect=function(){return this.rect},l.prototype.getDiagonal=function(){return Math.sqrt(this.rect.width*this.rect.width+this.rect.height*this.rect.height)},l.prototype.getHalfTheDiagonal=function(){return Math.sqrt(this.rect.height*this.rect.height+this.rect.width*this.rect.width)/2},l.prototype.setRect=function(e,t){this.rect.x=e.x,this.rect.y=e.y,this.rect.width=t.width,this.rect.height=t.height},l.prototype.setCenter=function(e,t){this.rect.x=e-this.rect.width/2,this.rect.y=t-this.rect.height/2},l.prototype.setLocation=function(e,t){this.rect.x=e,this.rect.y=t},l.prototype.moveBy=function(e,t){this.rect.x+=e,this.rect.y+=t},l.prototype.getEdgeListToNode=function(e){var t=[],n=this;return n.edges.forEach(function(r){if(r.target==e){if(r.source!=n)throw`Incorrect edge source!`;t.push(r)}}),t},l.prototype.getEdgesBetween=function(e){var t=[],n=this;return n.edges.forEach(function(r){if(!(r.source==n||r.target==n))throw`Incorrect edge source and/or target`;(r.target==e||r.source==e)&&t.push(r)}),t},l.prototype.getNeighborsList=function(){var e=new Set,t=this;return t.edges.forEach(function(n){if(n.source==t)e.add(n.target);else{if(n.target!=t)throw`Incorrect incidency!`;e.add(n.source)}}),e},l.prototype.withChildren=function(){var e=new Set,t,n;if(e.add(this),this.child!=null)for(var r=this.child.getNodes(),i=0;it&&(this.rect.x-=(this.labelWidth-t)/2,this.setWidth(this.labelWidth)),this.labelHeight>n&&(this.labelPos==`center`?this.rect.y-=(this.labelHeight-n)/2:this.labelPos==`top`&&(this.rect.y-=this.labelHeight-n),this.setHeight(this.labelHeight))}}},l.prototype.getInclusionTreeDepth=function(){if(this.inclusionTreeDepth==i.MAX_VALUE)throw`assert failed`;return this.inclusionTreeDepth},l.prototype.transform=function(e){var t=this.rect.x;t>o.WORLD_BOUNDARY?t=o.WORLD_BOUNDARY:t<-o.WORLD_BOUNDARY&&(t=-o.WORLD_BOUNDARY);var n=this.rect.y;n>o.WORLD_BOUNDARY?n=o.WORLD_BOUNDARY:n<-o.WORLD_BOUNDARY&&(n=-o.WORLD_BOUNDARY);var r=new c(t,n),i=e.inverseTransformPoint(r);this.setLocation(i.x,i.y)},l.prototype.getLeft=function(){return this.rect.x},l.prototype.getRight=function(){return this.rect.x+this.rect.width},l.prototype.getTop=function(){return this.rect.y},l.prototype.getBottom=function(){return this.rect.y+this.rect.height},l.prototype.getParent=function(){return this.owner==null?null:this.owner.getParent()},e.exports=l}),(function(e,t,n){function r(e,t){e==null&&t==null?(this.x=0,this.y=0):(this.x=e,this.y=t)}r.prototype.getX=function(){return this.x},r.prototype.getY=function(){return this.y},r.prototype.setX=function(e){this.x=e},r.prototype.setY=function(e){this.y=e},r.prototype.getDifference=function(e){return new DimensionD(this.x-e.x,this.y-e.y)},r.prototype.getCopy=function(){return new r(this.x,this.y)},r.prototype.translate=function(e){return this.x+=e.width,this.y+=e.height,this},e.exports=r}),(function(e,t,n){var r=n(2),i=n(10),a=n(0),o=n(6),s=n(3),c=n(1),l=n(13),u=n(12),d=n(11);function f(e,t,n){r.call(this,n),this.estimatedSize=i.MIN_VALUE,this.margin=a.DEFAULT_GRAPH_MARGIN,this.edges=[],this.nodes=[],this.isConnected=!1,this.parent=e,t!=null&&t instanceof o?this.graphManager=t:t!=null&&t instanceof Layout&&(this.graphManager=t.graphManager)}for(var p in f.prototype=Object.create(r.prototype),r)f[p]=r[p];f.prototype.getNodes=function(){return this.nodes},f.prototype.getEdges=function(){return this.edges},f.prototype.getGraphManager=function(){return this.graphManager},f.prototype.getParent=function(){return this.parent},f.prototype.getLeft=function(){return this.left},f.prototype.getRight=function(){return this.right},f.prototype.getTop=function(){return this.top},f.prototype.getBottom=function(){return this.bottom},f.prototype.isConnected=function(){return this.isConnected},f.prototype.add=function(e,t,n){if(t==null&&n==null){var r=e;if(this.graphManager==null)throw`Graph has no graph mgr!`;if(this.getNodes().indexOf(r)>-1)throw`Node already in graph!`;return r.owner=this,this.getNodes().push(r),r}else{var i=e;if(!(this.getNodes().indexOf(t)>-1&&this.getNodes().indexOf(n)>-1))throw`Source or target not in graph!`;if(!(t.owner==n.owner&&t.owner==this))throw`Both owners must be this graph!`;return t.owner==n.owner?(i.source=t,i.target=n,i.isInterGraph=!1,this.getEdges().push(i),t.edges.push(i),n!=t&&n.edges.push(i),i):null}},f.prototype.remove=function(e){var t=e;if(e instanceof s){if(t==null)throw`Node is null!`;if(!(t.owner!=null&&t.owner==this))throw`Owner graph is invalid!`;if(this.graphManager==null)throw`Owner graph manager is invalid!`;for(var n=t.edges.slice(),r,i=n.length,a=0;a-1&&u>-1))throw`Source and/or target doesn't know this edge!`;r.source.edges.splice(l,1),r.target!=r.source&&r.target.edges.splice(u,1);var o=r.source.owner.getEdges().indexOf(r);if(o==-1)throw`Not in owner's edge list!`;r.source.owner.getEdges().splice(o,1)}},f.prototype.updateLeftTop=function(){for(var e=i.MAX_VALUE,t=i.MAX_VALUE,n,r,a,o=this.getNodes(),s=o.length,c=0;cn&&(e=n),t>r&&(t=r)}return e==i.MAX_VALUE?null:(a=o[0].getParent().paddingLeft==null?this.margin:o[0].getParent().paddingLeft,this.left=t-a,this.top=e-a,new u(this.left,this.top))},f.prototype.updateBounds=function(e){for(var t=i.MAX_VALUE,n=-i.MAX_VALUE,r=i.MAX_VALUE,a=-i.MAX_VALUE,o,s,c,u,d,f=this.nodes,p=f.length,m=0;mo&&(t=o),nc&&(r=c),ao&&(t=o),nc&&(r=c),a=this.nodes.length){var c=0;n.forEach(function(t){t.owner==e&&c++}),c==this.nodes.length&&(this.isConnected=!0)}},e.exports=f}),(function(e,t,n){var r,i=n(1);function a(e){r=n(5),this.layout=e,this.graphs=[],this.edges=[]}a.prototype.addRoot=function(){var e=this.layout.newGraph(),t=this.layout.newNode(null),n=this.add(e,t);return this.setRootGraph(n),this.rootGraph},a.prototype.add=function(e,t,n,r,i){if(n==null&&r==null&&i==null){if(e==null)throw`Graph is null!`;if(t==null)throw`Parent node is null!`;if(this.graphs.indexOf(e)>-1)throw`Graph already in this graph mgr!`;if(this.graphs.push(e),e.parent!=null)throw`Already has a parent!`;if(t.child!=null)throw`Already has a child!`;return e.parent=t,t.child=e,e}else{i=n,r=t,n=e;var a=r.getOwner(),o=i.getOwner();if(!(a!=null&&a.getGraphManager()==this))throw`Source not in this graph mgr!`;if(!(o!=null&&o.getGraphManager()==this))throw`Target not in this graph mgr!`;if(a==o)return n.isInterGraph=!1,a.add(n,r,i);if(n.isInterGraph=!0,n.source=r,n.target=i,this.edges.indexOf(n)>-1)throw`Edge already in inter-graph edge list!`;if(this.edges.push(n),!(n.source!=null&&n.target!=null))throw`Edge source and/or target is null!`;if(!(n.source.edges.indexOf(n)==-1&&n.target.edges.indexOf(n)==-1))throw`Edge already in source and/or target incidency list!`;return n.source.edges.push(n),n.target.edges.push(n),n}},a.prototype.remove=function(e){if(e instanceof r){var t=e;if(t.getGraphManager()!=this)throw`Graph not in this graph mgr`;if(!(t==this.rootGraph||t.parent!=null&&t.parent.graphManager==this))throw`Invalid parent node!`;var n=[];n=n.concat(t.getEdges());for(var a,o=n.length,s=0;s=t.getRight()?n[0]+=Math.min(t.getX()-e.getX(),e.getRight()-t.getRight()):t.getX()<=e.getX()&&t.getRight()>=e.getRight()&&(n[0]+=Math.min(e.getX()-t.getX(),t.getRight()-e.getRight())),e.getY()<=t.getY()&&e.getBottom()>=t.getBottom()?n[1]+=Math.min(t.getY()-e.getY(),e.getBottom()-t.getBottom()):t.getY()<=e.getY()&&t.getBottom()>=e.getBottom()&&(n[1]+=Math.min(e.getY()-t.getY(),t.getBottom()-e.getBottom()));var a=Math.abs((t.getCenterY()-e.getCenterY())/(t.getCenterX()-e.getCenterX()));t.getCenterY()===e.getCenterY()&&t.getCenterX()===e.getCenterX()&&(a=1);var o=a*n[0],s=n[1]/a;n[0]o)return n[0]=r,n[1]=c,n[2]=a,n[3]=y,!1;if(ia)return n[0]=s,n[1]=i,n[2]=_,n[3]=o,!1;if(ra?(n[0]=u,n[1]=d,C=!0):(n[0]=l,n[1]=c,C=!0):T===D&&(r>a?(n[0]=s,n[1]=c,C=!0):(n[0]=f,n[1]=d,C=!0)),-E===D?a>r?(n[2]=v,n[3]=y,w=!0):(n[2]=_,n[3]=g,w=!0):E===D&&(a>r?(n[2]=h,n[3]=g,w=!0):(n[2]=b,n[3]=y,w=!0)),C&&w)return!1;if(r>a?i>o?(O=this.getCardinalDirection(T,D,4),k=this.getCardinalDirection(E,D,2)):(O=this.getCardinalDirection(-T,D,3),k=this.getCardinalDirection(-E,D,1)):i>o?(O=this.getCardinalDirection(-T,D,1),k=this.getCardinalDirection(-E,D,3)):(O=this.getCardinalDirection(T,D,2),k=this.getCardinalDirection(E,D,4)),!C)switch(O){case 1:j=c,A=r+-m/D,n[0]=A,n[1]=j;break;case 2:A=f,j=i+p*D,n[0]=A,n[1]=j;break;case 3:j=d,A=r+m/D,n[0]=A,n[1]=j;break;case 4:A=u,j=i+-p*D,n[0]=A,n[1]=j;break}if(!w)switch(k){case 1:N=g,M=a+-S/D,n[2]=M,n[3]=N;break;case 2:M=b,N=o+x*D,n[2]=M,n[3]=N;break;case 3:N=y,M=a+S/D,n[2]=M,n[3]=N;break;case 4:M=v,N=o+-x*D,n[2]=M,n[3]=N;break}}return!1},i.getCardinalDirection=function(e,t,n){return e>t?n:1+n%4},i.getIntersection=function(e,t,n,i){if(i==null)return this.getIntersection2(e,t,n);var a=e.x,o=e.y,s=t.x,c=t.y,l=n.x,u=n.y,d=i.x,f=i.y,p=void 0,m=void 0,h=void 0,g=void 0,_=void 0,v=void 0,y=void 0,b=void 0,x=void 0;return h=c-o,_=a-s,y=s*o-a*c,g=f-u,v=l-d,b=d*u-l*f,x=h*v-g*_,x===0?null:(p=(_*b-v*y)/x,m=(g*y-h*b)/x,new r(p,m))},i.angleOfVector=function(e,t,n,r){var i=void 0;return e===n?i=r0?1:e<0?-1:0},r.floor=function(e){return e<0?Math.ceil(e):Math.floor(e)},r.ceil=function(e){return e<0?Math.floor(e):Math.ceil(e)},e.exports=r}),(function(e,t,n){function r(){}r.MAX_VALUE=2147483647,r.MIN_VALUE=-2147483648,e.exports=r}),(function(e,t,n){var r=function(){function e(e,t){for(var n=0;n0&&t;){for(s.push(l[0]);s.length>0&&t;){var u=s[0];s.splice(0,1),o.add(u);for(var d=u.getEdges(),a=0;a-1&&l.splice(h,1)}o=new Set,c=new Map}}return e},f.prototype.createDummyNodesForBendpoints=function(e){for(var t=[],n=e.source,r=this.graphManager.calcLowestCommonAncestor(e.source,e.target),i=0;i0){for(var i=this.edgeToDummyNodes.get(n),a=0;a=0&&t.splice(d,1),s.getNeighborsList().forEach(function(e){if(n.indexOf(e)<0){var t=r.get(e)-1;t==1&&l.push(e),r.set(e,t)}})}n=n.concat(l),(t.length==1||t.length==2)&&(i=!0,a=t[0])}return a},f.prototype.setGraphManager=function(e){this.graphManager=e},e.exports=f}),(function(e,t,n){function r(){}r.seed=1,r.x=0,r.nextDouble=function(){return r.x=Math.sin(r.seed++)*1e4,r.x-Math.floor(r.x)},e.exports=r}),(function(e,t,n){var r=n(4);function i(e,t){this.lworldOrgX=0,this.lworldOrgY=0,this.ldeviceOrgX=0,this.ldeviceOrgY=0,this.lworldExtX=1,this.lworldExtY=1,this.ldeviceExtX=1,this.ldeviceExtY=1}i.prototype.getWorldOrgX=function(){return this.lworldOrgX},i.prototype.setWorldOrgX=function(e){this.lworldOrgX=e},i.prototype.getWorldOrgY=function(){return this.lworldOrgY},i.prototype.setWorldOrgY=function(e){this.lworldOrgY=e},i.prototype.getWorldExtX=function(){return this.lworldExtX},i.prototype.setWorldExtX=function(e){this.lworldExtX=e},i.prototype.getWorldExtY=function(){return this.lworldExtY},i.prototype.setWorldExtY=function(e){this.lworldExtY=e},i.prototype.getDeviceOrgX=function(){return this.ldeviceOrgX},i.prototype.setDeviceOrgX=function(e){this.ldeviceOrgX=e},i.prototype.getDeviceOrgY=function(){return this.ldeviceOrgY},i.prototype.setDeviceOrgY=function(e){this.ldeviceOrgY=e},i.prototype.getDeviceExtX=function(){return this.ldeviceExtX},i.prototype.setDeviceExtX=function(e){this.ldeviceExtX=e},i.prototype.getDeviceExtY=function(){return this.ldeviceExtY},i.prototype.setDeviceExtY=function(e){this.ldeviceExtY=e},i.prototype.transformX=function(e){var t=0,n=this.lworldExtX;return n!=0&&(t=this.ldeviceOrgX+(e-this.lworldOrgX)*this.ldeviceExtX/n),t},i.prototype.transformY=function(e){var t=0,n=this.lworldExtY;return n!=0&&(t=this.ldeviceOrgY+(e-this.lworldOrgY)*this.ldeviceExtY/n),t},i.prototype.inverseTransformX=function(e){var t=0,n=this.ldeviceExtX;return n!=0&&(t=this.lworldOrgX+(e-this.ldeviceOrgX)*this.lworldExtX/n),t},i.prototype.inverseTransformY=function(e){var t=0,n=this.ldeviceExtY;return n!=0&&(t=this.lworldOrgY+(e-this.ldeviceOrgY)*this.lworldExtY/n),t},i.prototype.inverseTransformPoint=function(e){return new r(this.inverseTransformX(e.x),this.inverseTransformY(e.y))},e.exports=i}),(function(e,t,n){function r(e){if(Array.isArray(e)){for(var t=0,n=Array(e.length);ta.ADAPTATION_LOWER_NODE_LIMIT&&(this.coolingFactor=Math.max(this.coolingFactor*a.COOLING_ADAPTATION_FACTOR,this.coolingFactor-(e-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*this.coolingFactor*(1-a.COOLING_ADAPTATION_FACTOR))),this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT_INCREMENTAL):(e>a.ADAPTATION_LOWER_NODE_LIMIT?this.coolingFactor=Math.max(a.COOLING_ADAPTATION_FACTOR,1-(e-a.ADAPTATION_LOWER_NODE_LIMIT)/(a.ADAPTATION_UPPER_NODE_LIMIT-a.ADAPTATION_LOWER_NODE_LIMIT)*(1-a.COOLING_ADAPTATION_FACTOR)):this.coolingFactor=1,this.initialCoolingFactor=this.coolingFactor,this.maxNodeDisplacement=a.MAX_NODE_DISPLACEMENT),this.maxIterations=Math.max(this.getAllNodes().length*5,this.maxIterations),this.totalDisplacementThreshold=this.displacementThresholdPerNode*this.getAllNodes().length,this.repulsionRange=this.calcRepulsionRange()},l.prototype.calcSpringForces=function(){for(var e=this.getAllEdges(),t,n=0;n0&&arguments[0]!==void 0?arguments[0]:!0,t=arguments.length>1&&arguments[1]!==void 0?arguments[1]:!1,n,r,i,o,s=this.getAllNodes(),c;if(this.useFRGridVariant)for(this.totalIterations%a.GRID_CALCULATION_CHECK_PERIOD==1&&e&&this.updateGrid(),c=new Set,n=0;nc||s>c)&&(e.gravitationForceX=-this.gravityConstant*i,e.gravitationForceY=-this.gravityConstant*a)):(c=t.getEstimatedSize()*this.compoundGravityRangeFactor,(o>c||s>c)&&(e.gravitationForceX=-this.gravityConstant*i*this.compoundGravityConstant,e.gravitationForceY=-this.gravityConstant*a*this.compoundGravityConstant))},l.prototype.isConverged=function(){var e,t=!1;return this.totalIterations>this.maxIterations/3&&(t=Math.abs(this.totalDisplacement-this.oldTotalDisplacement)<2),e=this.totalDisplacement=c.length||u>=c[0].length)){for(var d=0;de}}]),e}()}),(function(e,t,n){var r=function(){function e(e,t){for(var n=0;n2&&arguments[2]!==void 0?arguments[2]:1,a=arguments.length>3&&arguments[3]!==void 0?arguments[3]:-1,o=arguments.length>4&&arguments[4]!==void 0?arguments[4]:-1;i(this,e),this.sequence1=t,this.sequence2=n,this.match_score=r,this.mismatch_penalty=a,this.gap_penalty=o,this.iMax=t.length+1,this.jMax=n.length+1,this.grid=Array(this.iMax);for(var s=0;s=0;n--){var r=this.listeners[n];r.event===e&&r.callback===t&&this.listeners.splice(n,1)}},i.emit=function(e,t){for(var n=0;n{(function(r,i){typeof e==`object`&&typeof n==`object`?n.exports=i(t()):typeof define==`function`&&define.amd?define([`layout-base`],i):typeof e==`object`?e.coseBase=i(t()):r.coseBase=i(r.layoutBase)})(e,function(e){return(function(e){var t={};function n(r){if(t[r])return t[r].exports;var i=t[r]={i:r,l:!1,exports:{}};return e[r].call(i.exports,i,i.exports,n),i.l=!0,i.exports}return n.m=e,n.c=t,n.i=function(e){return e},n.d=function(e,t,r){n.o(e,t)||Object.defineProperty(e,t,{configurable:!1,enumerable:!0,get:r})},n.n=function(e){var t=e&&e.__esModule?function(){return e.default}:function(){return 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a(e,t,n,i){r.call(this,e,t,n,i)}for(var o in a.prototype=Object.create(r.prototype),r)a[o]=r[o];a.prototype.move=function(){var e=this.graphManager.getLayout();this.displacementX=e.coolingFactor*(this.springForceX+this.repulsionForceX+this.gravitationForceX)/this.noOfChildren,this.displacementY=e.coolingFactor*(this.springForceY+this.repulsionForceY+this.gravitationForceY)/this.noOfChildren,Math.abs(this.displacementX)>e.coolingFactor*e.maxNodeDisplacement&&(this.displacementX=e.coolingFactor*e.maxNodeDisplacement*i.sign(this.displacementX)),Math.abs(this.displacementY)>e.coolingFactor*e.maxNodeDisplacement&&(this.displacementY=e.coolingFactor*e.maxNodeDisplacement*i.sign(this.displacementY)),this.child==null||this.child.getNodes().length==0?this.moveBy(this.displacementX,this.displacementY):this.propogateDisplacementToChildren(this.displacementX,this.displacementY),e.totalDisplacement+=Math.abs(this.displacementX)+Math.abs(this.displacementY),this.springForceX=0,this.springForceY=0,this.repulsionForceX=0,this.repulsionForceY=0,this.gravitationForceX=0,this.gravitationForceY=0,this.displacementX=0,this.displacementY=0},a.prototype.propogateDisplacementToChildren=function(e,t){for(var n=this.getChild().getNodes(),r,i=0;i0)this.positionNodesRadially(e);else{this.reduceTrees(),this.graphManager.resetAllNodesToApplyGravitation();var t=new Set(this.getAllNodes()),n=this.nodesWithGravity.filter(function(e){return t.has(e)});this.graphManager.setAllNodesToApplyGravitation(n),this.positionNodesRandomly()}}else if(c.TREE_REDUCTION_ON_INCREMENTAL){this.reduceTrees(),this.graphManager.resetAllNodesToApplyGravitation();var t=new Set(this.getAllNodes()),n=this.nodesWithGravity.filter(function(e){return t.has(e)});this.graphManager.setAllNodesToApplyGravitation(n)}return this.initSpringEmbedder(),this.runSpringEmbedder(),!0},v.prototype.tick=function(){if(this.totalIterations++,this.totalIterations===this.maxIterations&&!this.isTreeGrowing&&!this.isGrowthFinished)if(this.prunedNodesAll.length>0)this.isTreeGrowing=!0;else return!0;if(this.totalIterations%l.CONVERGENCE_CHECK_PERIOD==0&&!this.isTreeGrowing&&!this.isGrowthFinished){if(this.isConverged())if(this.prunedNodesAll.length>0)this.isTreeGrowing=!0;else return!0;this.coolingCycle++,this.layoutQuality==0?this.coolingAdjuster=this.coolingCycle:this.layoutQuality==1&&(this.coolingAdjuster=this.coolingCycle/3),this.coolingFactor=Math.max(this.initialCoolingFactor-this.coolingCycle**+(Math.log(100*(this.initialCoolingFactor-this.finalTemperature))/Math.log(this.maxCoolingCycle))/100*this.coolingAdjuster,this.finalTemperature),this.animationPeriod=Math.ceil(this.initialAnimationPeriod*Math.sqrt(this.coolingFactor))}if(this.isTreeGrowing){if(this.growTreeIterations%10==0)if(this.prunedNodesAll.length>0){this.graphManager.updateBounds(),this.updateGrid(),this.growTree(this.prunedNodesAll),this.graphManager.resetAllNodesToApplyGravitation();var e=new Set(this.getAllNodes()),t=this.nodesWithGravity.filter(function(t){return e.has(t)});this.graphManager.setAllNodesToApplyGravitation(t),this.graphManager.updateBounds(),this.updateGrid(),this.coolingFactor=l.DEFAULT_COOLING_FACTOR_INCREMENTAL}else this.isTreeGrowing=!1,this.isGrowthFinished=!0;this.growTreeIterations++}if(this.isGrowthFinished){if(this.isConverged())return!0;this.afterGrowthIterations%10==0&&(this.graphManager.updateBounds(),this.updateGrid()),this.coolingFactor=l.DEFAULT_COOLING_FACTOR_INCREMENTAL*((100-this.afterGrowthIterations)/100),this.afterGrowthIterations++}var n=!this.isTreeGrowing&&!this.isGrowthFinished,r=this.growTreeIterations%10==1&&this.isTreeGrowing||this.afterGrowthIterations%10==1&&this.isGrowthFinished;return this.totalDisplacement=0,this.graphManager.updateBounds(),this.calcSpringForces(),this.calcRepulsionForces(n,r),this.calcGravitationalForces(),this.moveNodes(),this.animate(),!1},v.prototype.getPositionsData=function(){for(var e=this.graphManager.getAllNodes(),t={},n=0;n1){var s;for(s=0;sr&&(r=Math.floor(o.y)),a=Math.floor(o.x+c.DEFAULT_COMPONENT_SEPERATION)}this.transform(new f(u.WORLD_CENTER_X-o.x/2,u.WORLD_CENTER_Y-o.y/2))},v.radialLayout=function(e,t,n){var r=Math.max(this.maxDiagonalInTree(e),c.DEFAULT_RADIAL_SEPARATION);v.branchRadialLayout(t,null,0,359,0,r);var i=g.calculateBounds(e),a=new _;a.setDeviceOrgX(i.getMinX()),a.setDeviceOrgY(i.getMinY()),a.setWorldOrgX(n.x),a.setWorldOrgY(n.y);for(var o=0;o1;){var _=g[0];g.splice(0,1);var y=u.indexOf(_);y>=0&&u.splice(y,1),p--,d--}m=t==null?0:(u.indexOf(g[0])+1)%p;for(var b=Math.abs(r-n)/d,x=m;f!=d;x=++x%p){var S=u[x].getOtherEnd(e);if(S!=t){var C=(n+f*b)%360,w=(C+b)%360;v.branchRadialLayout(S,e,C,w,i+a,a),f++}}},v.maxDiagonalInTree=function(e){for(var t=m.MIN_VALUE,n=0;nt&&(t=r)}return t},v.prototype.calcRepulsionRange=function(){return 2*(this.level+1)*this.idealEdgeLength},v.prototype.groupZeroDegreeMembers=function(){var e=this,t={};this.memberGroups={},this.idToDummyNode={};for(var n=[],r=this.graphManager.getAllNodes(),i=0;i1){var r=`DummyCompound_`+n;e.memberGroups[r]=t[n];var i=t[n][0].getParent(),a=new o(e.graphManager);a.id=r,a.paddingLeft=i.paddingLeft||0,a.paddingRight=i.paddingRight||0,a.paddingBottom=i.paddingBottom||0,a.paddingTop=i.paddingTop||0,e.idToDummyNode[r]=a;var s=e.getGraphManager().add(e.newGraph(),a),c=i.getChild();c.add(a);for(var l=0;l=0;e--){var t=this.compoundOrder[e],n=t.id,r=t.paddingLeft,i=t.paddingTop;this.adjustLocations(this.tiledMemberPack[n],t.rect.x,t.rect.y,r,i)}},v.prototype.repopulateZeroDegreeMembers=function(){var e=this,t=this.tiledZeroDegreePack;Object.keys(t).forEach(function(n){var r=e.idToDummyNode[n],i=r.paddingLeft,a=r.paddingTop;e.adjustLocations(t[n],r.rect.x,r.rect.y,i,a)})},v.prototype.getToBeTiled=function(e){var t=e.id;if(this.toBeTiled[t]!=null)return this.toBeTiled[t];var n=e.getChild();if(n==null)return this.toBeTiled[t]=!1,!1;for(var r=n.getNodes(),i=0;i0)return this.toBeTiled[t]=!1,!1;if(a.getChild()==null){this.toBeTiled[a.id]=!1;continue}if(!this.getToBeTiled(a))return this.toBeTiled[t]=!1,!1}return this.toBeTiled[t]=!0,!0},v.prototype.getNodeDegree=function(e){e.id;for(var t=e.getEdges(),n=0,r=0;rc&&(c=u.rect.height)}n+=c+e.verticalPadding}},v.prototype.tileCompoundMembers=function(e,t){var n=this;this.tiledMemberPack=[],Object.keys(e).forEach(function(r){var i=t[r];n.tiledMemberPack[r]=n.tileNodes(e[r],i.paddingLeft+i.paddingRight),i.rect.width=n.tiledMemberPack[r].width,i.rect.height=n.tiledMemberPack[r].height})},v.prototype.tileNodes=function(e,t){var n={rows:[],rowWidth:[],rowHeight:[],width:0,height:t,verticalPadding:c.TILING_PADDING_VERTICAL,horizontalPadding:c.TILING_PADDING_HORIZONTAL};e.sort(function(e,t){return e.rect.width*e.rect.height>t.rect.width*t.rect.height?-1:+(e.rect.width*e.rect.height0&&(a+=e.horizontalPadding),e.rowWidth[n]=a,e.width0&&(o+=e.verticalPadding);var s=0;o>e.rowHeight[n]&&(s=e.rowHeight[n],e.rowHeight[n]=o,s=e.rowHeight[n]-s),e.height+=s,e.rows[n].push(t)},v.prototype.getShortestRowIndex=function(e){for(var t=-1,n=Number.MAX_VALUE,r=0;rn&&(t=r,n=e.rowWidth[r]);return t},v.prototype.canAddHorizontal=function(e,t,n){var r=this.getShortestRowIndex(e);if(r<0)return!0;var i=e.rowWidth[r];if(i+e.horizontalPadding+t<=e.width)return!0;var a=0;e.rowHeight[r]0&&(a=n+e.verticalPadding-e.rowHeight[r]);var o=e.width-i>=t+e.horizontalPadding?(e.height+a)/(i+t+e.horizontalPadding):(e.height+a)/e.width;a=n+e.verticalPadding;var s=e.widtha&&t!=n){r.splice(-1,1),e.rows[n].push(i),e.rowWidth[t]=e.rowWidth[t]-a,e.rowWidth[n]=e.rowWidth[n]+a,e.width=e.rowWidth[instance.getLongestRowIndex(e)];for(var o=Number.MIN_VALUE,s=0;so&&(o=r[s].height);t>0&&(o+=e.verticalPadding);var c=e.rowHeight[t]+e.rowHeight[n];e.rowHeight[t]=o,e.rowHeight[n]0)for(var u=i;u<=a;u++)c[0]+=this.grid[u][o-1].length+this.grid[u][o].length-1;if(a0)for(var u=o;u<=s;u++)c[3]+=this.grid[i-1][u].length+this.grid[i][u].length-1;for(var d=m.MAX_VALUE,f,p,h=0;h{(function(r,i){typeof e==`object`&&typeof t==`object`?t.exports=i(n()):typeof define==`function`&&define.amd?define([`cose-base`],i):typeof e==`object`?e.cytoscapeCoseBilkent=i(n()):r.cytoscapeCoseBilkent=i(r.coseBase)})(e,function(e){return(function(e){var t={};function n(r){if(t[r])return t[r].exports;var i=t[r]={i:r,l:!1,exports:{}};return e[r].call(i.exports,i,i.exports,n),i.l=!0,i.exports}return n.m=e,n.c=t,n.i=function(e){return e},n.d=function(e,t,r){n.o(e,t)||Object.defineProperty(e,t,{configurable:!1,enumerable:!0,get:r})},n.n=function(e){var t=e&&e.__esModule?function(){return e.default}:function(){return e};return n.d(t,`a`,t),t},n.o=function(e,t){return Object.prototype.hasOwnProperty.call(e,t)},n.p=``,n(n.s=1)})([(function(t,n){t.exports=e}),(function(e,t,n){var r=n(0).layoutBase.LayoutConstants,i=n(0).layoutBase.FDLayoutConstants,a=n(0).CoSEConstants,o=n(0).CoSELayout,s=n(0).CoSENode,c=n(0).layoutBase.PointD,l=n(0).layoutBase.DimensionD,u={ready:function(){},stop:function(){},quality:`default`,nodeDimensionsIncludeLabels:!1,refresh:30,fit:!0,padding:10,randomize:!0,nodeRepulsion:4500,idealEdgeLength:50,edgeElasticity:.45,nestingFactor:.1,gravity:.25,numIter:2500,tile:!0,animate:`end`,animationDuration:500,tilingPaddingVertical:10,tilingPaddingHorizontal:10,gravityRangeCompound:1.5,gravityCompound:1,gravityRange:3.8,initialEnergyOnIncremental:.5};function d(e,t){var n={};for(var r in e)n[r]=e[r];for(var r in t)n[r]=t[r];return n}function f(e){this.options=d(u,e),p(this.options)}var p=function(e){e.nodeRepulsion!=null&&(a.DEFAULT_REPULSION_STRENGTH=i.DEFAULT_REPULSION_STRENGTH=e.nodeRepulsion),e.idealEdgeLength!=null&&(a.DEFAULT_EDGE_LENGTH=i.DEFAULT_EDGE_LENGTH=e.idealEdgeLength),e.edgeElasticity!=null&&(a.DEFAULT_SPRING_STRENGTH=i.DEFAULT_SPRING_STRENGTH=e.edgeElasticity),e.nestingFactor!=null&&(a.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR=i.PER_LEVEL_IDEAL_EDGE_LENGTH_FACTOR=e.nestingFactor),e.gravity!=null&&(a.DEFAULT_GRAVITY_STRENGTH=i.DEFAULT_GRAVITY_STRENGTH=e.gravity),e.numIter!=null&&(a.MAX_ITERATIONS=i.MAX_ITERATIONS=e.numIter),e.gravityRange!=null&&(a.DEFAULT_GRAVITY_RANGE_FACTOR=i.DEFAULT_GRAVITY_RANGE_FACTOR=e.gravityRange),e.gravityCompound!=null&&(a.DEFAULT_COMPOUND_GRAVITY_STRENGTH=i.DEFAULT_COMPOUND_GRAVITY_STRENGTH=e.gravityCompound),e.gravityRangeCompound!=null&&(a.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR=i.DEFAULT_COMPOUND_GRAVITY_RANGE_FACTOR=e.gravityRangeCompound),e.initialEnergyOnIncremental!=null&&(a.DEFAULT_COOLING_FACTOR_INCREMENTAL=i.DEFAULT_COOLING_FACTOR_INCREMENTAL=e.initialEnergyOnIncremental),e.quality==`draft`?r.QUALITY=0:e.quality==`proof`?r.QUALITY=2:r.QUALITY=1,a.NODE_DIMENSIONS_INCLUDE_LABELS=i.NODE_DIMENSIONS_INCLUDE_LABELS=r.NODE_DIMENSIONS_INCLUDE_LABELS=e.nodeDimensionsIncludeLabels,a.DEFAULT_INCREMENTAL=i.DEFAULT_INCREMENTAL=r.DEFAULT_INCREMENTAL=!e.randomize,a.ANIMATE=i.ANIMATE=r.ANIMATE=e.animate,a.TILE=e.tile,a.TILING_PADDING_VERTICAL=typeof e.tilingPaddingVertical==`function`?e.tilingPaddingVertical.call():e.tilingPaddingVertical,a.TILING_PADDING_HORIZONTAL=typeof e.tilingPaddingHorizontal==`function`?e.tilingPaddingHorizontal.call():e.tilingPaddingHorizontal};f.prototype.run=function(){var e,t,n=this.options;this.idToLNode={};var r=this.layout=new o,i=this;i.stopped=!1,this.cy=this.options.cy,this.cy.trigger({type:`layoutstart`,layout:this});var a=r.newGraphManager();this.gm=a;var s=this.options.eles.nodes(),c=this.options.eles.edges();this.root=a.addRoot(),this.processChildrenList(this.root,this.getTopMostNodes(s),r);for(var l=0;l0){var h=n.getGraphManager().add(n.newGraph(),u);this.processChildrenList(h,o,n)}}},f.prototype.stop=function(){return this.stopped=!0,this};var m=function(e){e(`layout`,`cose-bilkent`,f)};typeof cytoscape<`u`&&m(cytoscape),e.exports=m})])})}));export default r(); \ No newline at end of file diff --git a/internal/ui/dist/assets/index-B9ZFj2IV.js b/internal/ui/dist/assets/index-B9ZFj2IV.js new 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s.runSimilar(e),serviceFilter:n,onClearFilter:f,dashboard:a.dashboard}),e===`mcp`&&(0,S.jsx)(Mt,{})]})}(0,ke.createRoot)(document.getElementById(`root`)).render((0,S.jsx)(C.StrictMode,{children:(0,S.jsxs)(Oe,{mode:`dark`,children:[(0,S.jsx)(Ut,{}),(0,S.jsx)(be,{})]})}));export{o as t}; \ No newline at end of file diff --git a/internal/ui/dist/index.html b/internal/ui/dist/index.html index fd56f90..68d8839 100644 --- a/internal/ui/dist/index.html +++ b/internal/ui/dist/index.html @@ -4,7 +4,7 @@ OtelContext - + diff --git a/ui/src/App.tsx b/ui/src/App.tsx index 547a46a..fdcae01 100644 --- a/ui/src/App.tsx +++ b/ui/src/App.tsx @@ -1,91 +1,35 @@ -import { useCallback, useRef, useState } from 'react' +import { useState } from 'react' import { AppShell } from '@ossrandom/design-system' import TopNav, { type OtelView } from './components/nav/TopNav' import ServicesView from './components/observability/ServicesView' -import TracesView from './components/observability/TracesView' -import LogsView from './components/observability/LogsView' -import MCPConsole from './components/mcp/MCPConsole' import { useSystemGraph } from './hooks/useSystemGraph' import { useDashboard } from './hooks/useDashboard' -import { useTraces } from './hooks/useTraces' -import { useLogs } from './hooks/useLogs' import { useWebSocket } from './hooks/useWebSocket' -import type { LogEntry } from './types/api' export default function App() { const [view, setView] = useState('services') - const [serviceFilter, setServiceFilter] = useState(null) const graph = useSystemGraph() const dash = useDashboard() - const traces = useTraces() - const logs = useLogs() - const setLogsRef = useRef(logs.setLogs) - setLogsRef.current = logs.setLogs - const appendLogs = useCallback((incoming: LogEntry[]) => { - setLogsRef.current((current) => [...incoming, ...current].slice(0, 200)) - }, []) - - const ws = useWebSocket(appendLogs) + // WebSocket retained as the live/offline source for the header indicator; + // log batches it pushes are intentionally discarded. + const ws = useWebSocket(() => undefined) const wsConnected = !!ws.current - const navigateToTraces = useCallback((service: string) => { - setServiceFilter(service) - setView('traces') - }, []) - - const navigateToLogs = useCallback((service: string) => { - setServiceFilter(service) - setView('logs') - }, []) - - const clearFilter = useCallback(() => { - setServiceFilter(null) - }, []) - return ( } > - {view === 'services' && ( - - )} - {view === 'traces' && ( - void traces.selectTrace(traceId)} - serviceFilter={serviceFilter} - onClearFilter={clearFilter} - dashboard={dash.dashboard} - /> - )} - {view === 'logs' && ( - void logs.runSimilar(query)} - serviceFilter={serviceFilter} - onClearFilter={clearFilter} - dashboard={dash.dashboard} - /> - )} - {view === 'mcp' && } + ) } diff --git a/ui/src/components/mcp/MCPConsole.tsx b/ui/src/components/mcp/MCPConsole.tsx index 9c1666f..c510523 100644 --- a/ui/src/components/mcp/MCPConsole.tsx +++ b/ui/src/components/mcp/MCPConsole.tsx @@ -1,3 +1,7 @@ +// Note: MCPConsole is no longer mounted in App.tsx — the MCP endpoint URL +// + Copy button now live in the TopNav header. This file is kept temporarily +// as orphaned source pending a follow-up cleanup pass; it is tree-shaken out +// of the production bundle. import { useState } from 'react' import { Badge, Button, Card, Input, Space } from '@ossrandom/design-system' import { Check, Copy, Terminal } from 'lucide-react' @@ -13,23 +17,18 @@ export default function MCPConsole() { } return ( - - + + - MCP Endpoint + MCP Endpoint + live - } - subtitle="Plug any MCP-compatible client (Claude Desktop, Cursor, custom agents) into the URL below." - extra={live} - > - - - + +
+ +
+ ) + if (isCompact) { + // Compact: brand + copy-only button + indicators. Skip the URL field + // because it eats horizontal real estate that we don't have on phones. return ( - <> - - - } - aria-label="Open navigation" - variant="ghost" - size="sm" - onClick={() => setDrawerOpen(true)} - /> - OtelContext - - - {liveBadge} - {themeBtn} - + + OtelContext + + {copyBtn} + {liveBadge} + {themeBtn} - - setDrawerOpen(false)} - placement="left" - width="min(280px, 86vw)" - title="OtelContext" - > - - mode="vertical" - items={menuItems} - selectedKeys={[view]} - onSelect={(key) => { - onNavigate(key) - setDrawerOpen(false) - }} - /> - - + ) } + // Desktop: brand on the left, MCP URL field grows to fill, copy button + + // status indicators sit on the right. Single-row, no tabs (only one view). return ( - + OtelContext - - items={tabs} - value={view} - variant="line" - onChange={(key) => onNavigate(key)} - /> +
+ +
+ {copyBtn} {liveBadge} {themeBtn} diff --git a/ui/src/components/observability/ServiceSidePanel.tsx b/ui/src/components/observability/ServiceSidePanel.tsx index 216f890..c643e0d 100644 --- a/ui/src/components/observability/ServiceSidePanel.tsx +++ b/ui/src/components/observability/ServiceSidePanel.tsx @@ -1,6 +1,6 @@ import React from 'react' import { Alert, Badge, Button, Card, Grid, IconButton, Progress, Space, Stat } from '@ossrandom/design-system' -import { ArrowRight, X } from 'lucide-react' +import { X } from 'lucide-react' import type { SystemNode, SystemEdge } from '../../types/api' interface ServiceSidePanelProps { @@ -8,8 +8,6 @@ interface ServiceSidePanelProps { edges: SystemEdge[] onClose: () => void onSelectService: (id: string) => void - onViewTraces: (service: string) => void - onViewLogs: (service: string) => void } function statusTone(status: string): 'info' | 'warning' | 'danger' | 'neutral' { @@ -24,8 +22,6 @@ const ServiceSidePanel: React.FC = ({ edges, onClose, onSelectService, - onViewTraces, - onViewLogs, }) => { const upstream = edges.filter((e) => e.target === node.id) const downstream = edges.filter((e) => e.source === node.id) @@ -126,26 +122,6 @@ const ServiceSidePanel: React.FC = ({ )} - - - - ) } diff --git a/ui/src/components/observability/ServicesView.tsx b/ui/src/components/observability/ServicesView.tsx index eb13517..cdd22c0 100644 --- a/ui/src/components/observability/ServicesView.tsx +++ b/ui/src/components/observability/ServicesView.tsx @@ -16,6 +16,7 @@ import StatRow from './StatRow' import type { DashboardStats, RepoStats, SystemGraphResponse, SystemNode } from '../../types/api' import { fmt } from '../../lib/utils' import { useMediaQuery } from '../../hooks/useMediaQuery' +import { useWindowHeight } from '../../hooks/useWindowHeight' interface ServicesViewProps { graph: SystemGraphResponse | null @@ -23,8 +24,6 @@ interface ServicesViewProps { error: string | null dashboard: DashboardStats | null stats: RepoStats | null - onNavigateToTraces: (service: string) => void - onNavigateToLogs: (service: string) => void } function toNodeStatus(status: string | undefined): DSNode['status'] { @@ -43,12 +42,15 @@ const ServicesView: React.FC = ({ error, dashboard, stats, - onNavigateToTraces, - onNavigateToLogs, }) => { const [selectedNode, setSelectedNode] = useState(null) const [search, setSearch] = useState('') const isCompact = useMediaQuery('(max-width: 760px)') + const windowH = useWindowHeight() + // Subtract chrome above the canvas (TopNav + PageHeader + StatRow + Card + // padding + Space gaps + breathing margin). 460px floor so a very short + // window still shows a usable canvas. + const mapHeight = isCompact ? 460 : Math.max(460, windowH - 320) const nodes = graph?.nodes ?? [] const edges = graph?.edges ?? [] @@ -92,7 +94,7 @@ const ServicesView: React.FC = ({ } return ( - + = ({ nodes={dsNodes} edges={dsEdges} layout="cose-bilkent" - height={isCompact ? 460 : 660} + height={mapHeight} onNodeClick={handleNodeClick} /> )} @@ -161,8 +163,6 @@ const ServicesView: React.FC = ({ edges={edges} onClose={() => setSelectedNode(null)} onSelectService={handleSelectService} - onViewTraces={onNavigateToTraces} - onViewLogs={onNavigateToLogs} /> )} diff --git a/ui/src/components/observability/__tests__/ServiceSidePanel.test.tsx b/ui/src/components/observability/__tests__/ServiceSidePanel.test.tsx index 8ee87c1..227517a 100644 --- a/ui/src/components/observability/__tests__/ServiceSidePanel.test.tsx +++ b/ui/src/components/observability/__tests__/ServiceSidePanel.test.tsx @@ -24,8 +24,6 @@ function renderPanel(overrides = {}) { edges: mockEdges, onClose: vi.fn(), onSelectService: vi.fn(), - onViewTraces: vi.fn(), - onViewLogs: vi.fn(), }; const props = { ...defaults, ...overrides }; return { ...render(), ...props }; @@ -57,13 +55,6 @@ describe('ServiceSidePanel', () => { expect(screen.getByText('avg latency above 500ms')).toBeInTheDocument(); }); - it('calls onViewTraces when "View Traces" clicked', async () => { - const { onViewTraces } = renderPanel(); - const user = userEvent.setup(); - await user.click(screen.getByText(/View Traces/)); - expect(onViewTraces).toHaveBeenCalledWith('inventory'); - }); - it('calls onSelectService when upstream service clicked', async () => { const { onSelectService } = renderPanel(); const user = userEvent.setup(); diff --git a/ui/src/hooks/useWindowHeight.ts b/ui/src/hooks/useWindowHeight.ts new file mode 100644 index 0000000..b3986f1 --- /dev/null +++ b/ui/src/hooks/useWindowHeight.ts @@ -0,0 +1,24 @@ +import { useEffect, useState } from 'react' + +/** + * Tracks `window.innerHeight` with a `resize` listener. SSR-safe — returns + * `fallback` on the first render when `window` is unavailable. + * + * Used by views that render a fixed-height canvas/chart and want it to fill + * the visible viewport instead of being capped at an arbitrary px value. + */ +export function useWindowHeight(fallback = 800): number { + const [h, setH] = useState(() => { + if (typeof window === 'undefined') return fallback + return window.innerHeight + }) + + useEffect(() => { + if (typeof window === 'undefined') return + const update = () => setH(window.innerHeight) + window.addEventListener('resize', update) + return () => window.removeEventListener('resize', update) + }, []) + + return h +}