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Install datalad module

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mvdoc committed Jul 22, 2018
1 parent 5ffb235 commit f3c22ce395ba6a613fb598c40a2b395dfa8c0baa
Showing with 10 additions and 6 deletions.
  1. +4 −2 Dockerfile
  2. +5 −3 Singularity
  3. +1 −1 generate_container.sh
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@@ -1,5 +1,5 @@
# Generated by Neurodocker version 0.4.1-dev
# Timestamp: 2018-07-22 14:07:47 UTC
# Timestamp: 2018-07-22 14:48:52 UTC
#
# Thank you for using Neurodocker. If you discover any issues
# or ways to improve this software, please submit an issue or
@@ -61,6 +61,7 @@ RUN apt-get update -qq \
python-pip \
python-wheel \
python-setuptools \
python-datalad \
&& apt-get clean \
&& rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
@@ -138,7 +139,8 @@ RUN echo '{ \
\n "dcmtk", \
\n "python-pip", \
\n "python-wheel", \
\n "python-setuptools" \
\n "python-setuptools", \
\n "python-datalad" \
\n ] \
\n ], \
\n [ \
View
@@ -1,5 +1,5 @@
# Generated by Neurodocker version 0.4.1-dev
# Timestamp: 2018-07-22 14:07:49 UTC
# Timestamp: 2018-07-22 14:48:54 UTC
#
# Thank you for using Neurodocker. If you discover any issues
# or ways to improve this software, please submit an issue or
@@ -55,7 +55,8 @@ apt-get install -y -q --no-install-recommends \
dcmtk \
python-pip \
python-wheel \
python-setuptools
python-setuptools \
python-datalad
apt-get clean
rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
@@ -137,7 +138,8 @@ echo '{
\n "dcmtk",
\n "python-pip",
\n "python-wheel",
\n "python-setuptools"
\n "python-setuptools",
\n "python-datalad"
\n ]
\n ],
\n [
View
@@ -7,7 +7,7 @@ generate() {
--install vim wget strace time ncdu gnupg curl procps datalad \
git-annex-standalone python-nipype virtualenv \
python-dcmstack python-configparser python-funcsigs \
python-pytest dcmtk python-pip python-wheel python-setuptools \
python-pytest dcmtk python-pip python-wheel python-setuptools python-datalad \
--run "curl -sL https://deb.nodesource.com/setup_6.x | bash - "\
--install nodejs npm \
--run "npm install -g bids-validator@0.26.11" \

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