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KnetMiner

KnetMiner is a web application to search and visualise genome-scale knowledge networks. It is used by scientists in academia and industry to accelerate gene-trait discovery research. KnetMiner offers features such as keyword, gene list and genome region search, query refinement, gene ranking, gene set enrichment analysis and interactive visualisation of knowledge networks and genomic information.

The web app can be deployed on site or in the AWS cloud using Docker. Examples of free and public KnetMiners are available at https://knetminer.org.

KnetMiner also offers a set of high-level web API endpoints to access and visualise the knowledge networks from other applications (see details on our wiki).

The data that power the web application are also available as FAIR data, through linked data and knowledge graph endpoints.