NCBI localblast toolkit for GCModeller
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LocalBLAST
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NCBI-localBLAST.sln
README.md

README.md

NCBI localblast library

GCModeller tools for NCBI blast+ (version 2.28 or later) localblast data parser and analysis toolkit for .NET language

Download library from nuget:

https://www.nuget.org/packages/NCBI_localblast/

Install nuget package:

PM> Install-Package NCBI_localblast

Blastn result visualization example by using GCModeller toolkit

Blastp Analysis of plasmid pXOCgx01 Niu, X.-N., et al. (2015). "Complete sequence and detailed analysis of the first indigenous plasmid from Xanthomonas oryzae pv. oryzicola." BMC Microbiol 15(1): 1-15.

Bacterial plasmids have a major impact on metabolic function and adaptation of their hosts. An indigenous plasmid was identified in a Chinese isolate (GX01) of the invasive phytopathogen Xanthomonas oryzae pv. oryzicola (Xoc), the causal agent of rice bacterial leaf streak (BLS). To elucidate the biological functions of the plasmid, we have sequenced and comprehensively annotated the plasmid.