From d0f47b6b1cb6fba474b568b345a02a4f6de3cfea Mon Sep 17 00:00:00 2001
From: LianeHughes <68756672+LianeHughes@users.noreply.github.com>
Date: Tue, 16 Jan 2024 13:50:22 +0100
Subject: [PATCH] finalise plots and change to MNCS
---
data/affiliates_keywords.json | 8331 ++++-----
data/fellows_keywords.json | 5299 ++++--
data/infrastructure_keywords.json | 25448 +++++++++++++++++-----------
index.html | 4 +-
4 files changed, 23713 insertions(+), 15369 deletions(-)
diff --git a/data/affiliates_keywords.json b/data/affiliates_keywords.json
index 640cabf..9a71e84 100644
--- a/data/affiliates_keywords.json
+++ b/data/affiliates_keywords.json
@@ -4,8 +4,8 @@
{
"id": 318,
"label": "Adenocarcinoma",
- "x": -0.3300,
- "y": -0.4540,
+ "x": -0.6612,
+ "y": -0.8533,
"cluster": 5,
"weights": {
"Links": 21.0000,
@@ -21,12 +21,12 @@
{
"id": 358,
"label": "Adipose Tissue",
- "x": 0.8122,
- "y": 0.6122,
- "cluster": 4,
+ "x": 0.7754,
+ "y": -0.7245,
+ "cluster": 3,
"weights": {
- "Links": 42.0000,
- "Total link strength": 76.0000,
+ "Links": 43.0000,
+ "Total link strength": 77.0000,
"Occurrences": 21.0000
},
"scores": {
@@ -38,9 +38,9 @@
{
"id": 366,
"label": "Admixture",
- "x": 1.1062,
- "y": 0.1339,
- "cluster": 2,
+ "x": 1.1313,
+ "y": 0.4740,
+ "cluster": 4,
"weights": {
"Links": 22.0000,
"Total link strength": 46.0000,
@@ -55,9 +55,9 @@
{
"id": 408,
"label": "Affinity",
- "x": -0.6538,
- "y": -0.8918,
- "cluster": 3,
+ "x": -0.7097,
+ "y": 0.2428,
+ "cluster": 1,
"weights": {
"Links": 24.0000,
"Total link strength": 33.0000,
@@ -72,8 +72,8 @@
{
"id": 428,
"label": "Age",
- "x": 0.3833,
- "y": 0.6189,
+ "x": 0.5154,
+ "y": -0.5940,
"cluster": 5,
"weights": {
"Links": 38.0000,
@@ -89,8 +89,8 @@
{
"id": 497,
"label": "Algorithm",
- "x": 0.5361,
- "y": -0.9893,
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+ "y": -0.6718,
"cluster": 5,
"weights": {
"Links": 19.0000,
@@ -106,12 +106,12 @@
{
"id": 506,
"label": "Alignment",
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- "y": -0.4777,
- "cluster": 2,
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+ "y": 0.3454,
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"weights": {
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+ "Total link strength": 92.0000,
"Occurrences": 34.0000
},
"scores": {
@@ -123,8 +123,8 @@
{
"id": 593,
"label": "Alzheimers Disease",
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- "y": 0.0335,
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+ "y": -0.5591,
"cluster": 5,
"weights": {
"Links": 53.0000,
@@ -140,8 +140,8 @@
{
"id": 620,
"label": "Amino Acids",
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- "y": -0.3063,
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+ "y": 0.2112,
"cluster": 5,
"weights": {
"Links": 30.0000,
@@ -157,8 +157,8 @@
{
"id": 659,
"label": "Amplification",
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- "y": -0.6491,
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+ "y": -0.0728,
"cluster": 5,
"weights": {
"Links": 33.0000,
@@ -174,9 +174,9 @@
{
"id": 707,
"label": "Ancestry",
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- "y": -0.5089,
- "cluster": 2,
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+ "y": -0.0231,
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"weights": {
"Links": 20.0000,
"Total link strength": 34.0000,
@@ -191,9 +191,9 @@
{
"id": 713,
"label": "Ancient Dna",
- "x": 1.2511,
- "y": -0.3153,
- "cluster": 2,
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+ "y": 0.1826,
+ "cluster": 4,
"weights": {
"Links": 21.0000,
"Total link strength": 37.0000,
@@ -208,9 +208,9 @@
{
"id": 726,
"label": "Angiogenesis",
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- "y": -0.2240,
- "cluster": 1,
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+ "y": 0.0202,
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"weights": {
"Links": 52.0000,
"Total link strength": 83.0000,
@@ -225,8 +225,8 @@
{
"id": 806,
"label": "Antibodies",
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- "y": 0.0177,
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"cluster": 5,
"weights": {
"Links": 78.0000,
@@ -242,9 +242,9 @@
{
"id": 913,
"label": "Apoptosis",
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- "y": -0.0960,
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+ "y": -0.2337,
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"Links": 72.0000,
"Total link strength": 142.0000,
@@ -259,8 +259,8 @@
{
"id": 1042,
"label": "Assays",
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- "y": -0.6612,
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+ "y": -0.2634,
"cluster": 5,
"weights": {
"Links": 41.0000,
@@ -276,9 +276,9 @@
{
"id": 1090,
"label": "Atherosclerosis",
- "x": -0.1767,
- "y": 0.8656,
- "cluster": 4,
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"Total link strength": 44.0000,
@@ -293,9 +293,9 @@
{
"id": 1139,
"label": "Autoantibodies",
- "x": 0.1043,
- "y": 0.8802,
- "cluster": 4,
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+ "y": 0.5960,
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"weights": {
"Links": 31.0000,
"Total link strength": 54.0000,
@@ -310,9 +310,9 @@
{
"id": 1157,
"label": "Autoimmunity",
- "x": -0.1374,
- "y": 0.7446,
- "cluster": 4,
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+ "y": 0.4633,
+ "cluster": 3,
"weights": {
"Links": 35.0000,
"Total link strength": 76.0000,
@@ -327,8 +327,8 @@
{
"id": 1166,
"label": "Autophagy",
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- "y": -0.4826,
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+ "y": 0.8630,
"cluster": 6,
"weights": {
"Links": 31.0000,
@@ -344,9 +344,9 @@
{
"id": 1201,
"label": "B-Cells",
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- "y": 0.8104,
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"weights": {
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@@ -361,9 +361,9 @@
{
"id": 1219,
"label": "Bacterial Communities",
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- "y": 0.2005,
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"Total link strength": 133.0000,
@@ -378,9 +378,9 @@
{
"id": 1277,
"label": "Barrier",
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- "y": -0.3596,
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"Total link strength": 40.0000,
@@ -395,9 +395,9 @@
{
"id": 1320,
"label": "Behavior",
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"Total link strength": 17.0000,
@@ -412,9 +412,9 @@
{
"id": 1408,
"label": "Binding",
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- "y": -0.4576,
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"Total link strength": 178.0000,
@@ -429,8 +429,8 @@
{
"id": 1453,
"label": "Biodistribution",
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- "y": -0.8633,
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+ "y": -0.5384,
"cluster": 5,
"weights": {
"Links": 19.0000,
@@ -446,9 +446,9 @@
{
"id": 1460,
"label": "Biogenesis",
- "x": 0.2756,
- "y": -0.7323,
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+ "y": -0.2622,
+ "cluster": 7,
"weights": {
"Links": 36.0000,
"Total link strength": 50.0000,
@@ -463,9 +463,9 @@
{
"id": 1486,
"label": "Biology",
- "x": 0.5115,
- "y": 0.6423,
- "cluster": 2,
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+ "y": -0.7963,
+ "cluster": 4,
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"Total link strength": 31.0000,
@@ -480,8 +480,8 @@
{
"id": 1494,
"label": "Biomarkers",
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- "y": 0.2610,
+ "x": -0.0020,
+ "y": -0.5499,
"cluster": 5,
"weights": {
"Links": 107.0000,
@@ -497,12 +497,12 @@
{
"id": 1525,
"label": "Biosynthesis",
- "x": 0.4617,
- "y": 0.2646,
- "cluster": 2,
+ "x": 0.1453,
+ "y": -0.8916,
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+ "Total link strength": 31.0000,
"Occurrences": 12.0000
},
"scores": {
@@ -514,8 +514,8 @@
{
"id": 1565,
"label": "Blood",
- "x": 0.0254,
- "y": 0.3194,
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+ "y": -0.5078,
"cluster": 5,
"weights": {
"Links": 47.0000,
@@ -531,9 +531,9 @@
{
"id": 1607,
"label": "Body-Mass Index",
- "x": 0.5485,
- "y": 0.8150,
- "cluster": 4,
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+ "y": 0.1643,
+ "cluster": 3,
"weights": {
"Links": 26.0000,
"Total link strength": 46.0000,
@@ -548,9 +548,9 @@
{
"id": 1666,
"label": "Brain",
- "x": -0.4515,
- "y": -0.1470,
- "cluster": 1,
+ "x": -0.5513,
+ "y": -0.1712,
+ "cluster": 2,
"weights": {
"Links": 65.0000,
"Total link strength": 108.0000,
@@ -565,9 +565,9 @@
{
"id": 1710,
"label": "Breast Cancer",
- "x": -0.3068,
- "y": -0.0091,
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+ "y": -0.3607,
+ "cluster": 2,
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"Total link strength": 217.0000,
@@ -582,9 +582,9 @@
{
"id": 1789,
"label": "c-Myc",
- "x": -0.6949,
- "y": -0.5685,
- "cluster": 1,
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+ "y": 0.0756,
+ "cluster": 2,
"weights": {
"Links": 31.0000,
"Total link strength": 42.0000,
@@ -599,12 +599,12 @@
{
"id": 1851,
"label": "Cancer",
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- "y": 0.0555,
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"scores": {
@@ -616,9 +616,9 @@
{
"id": 1945,
"label": "Carbon",
- "x": 1.2609,
- "y": 0.0361,
- "cluster": 2,
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+ "y": 0.6690,
+ "cluster": 4,
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"Links": 15.0000,
"Total link strength": 22.0000,
@@ -633,9 +633,9 @@
{
"id": 1987,
"label": "Cardiovascular Disease",
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- "y": 1.0330,
- "cluster": 4,
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@@ -650,9 +650,9 @@
{
"id": 2212,
"label": "Cells",
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- "y": -0.1017,
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@@ -667,9 +667,9 @@
{
"id": 2246,
"label": "Central Nervous System",
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- "y": 0.1830,
- "cluster": 1,
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+ "y": -0.2736,
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@@ -684,8 +684,8 @@
{
"id": 2269,
"label": "Cerebrospinal Fluid",
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- "y": 0.3841,
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+ "y": -0.7365,
"cluster": 5,
"weights": {
"Links": 31.0000,
@@ -701,9 +701,9 @@
{
"id": 2339,
"label": "Chemokines",
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- "y": 0.9743,
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+ "cluster": 3,
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@@ -718,9 +718,9 @@
{
"id": 2344,
"label": "Chemotherapy",
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- "y": -0.4075,
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@@ -735,12 +735,12 @@
{
"id": 2360,
"label": "Children",
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- "y": 0.3307,
- "cluster": 4,
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+ "y": -0.2679,
+ "cluster": 6,
"weights": {
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+ "Links": 47.0000,
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"Occurrences": 30.0000
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"scores": {
@@ -752,9 +752,9 @@
{
"id": 2395,
"label": "Cholesterol",
- "x": -0.0099,
- "y": -0.0343,
- "cluster": 3,
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+ "y": 0.1025,
+ "cluster": 1,
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@@ -769,9 +769,9 @@
{
"id": 2409,
"label": "Chromatin",
- "x": 0.1454,
- "y": 0.3638,
- "cluster": 2,
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+ "y": 0.4759,
+ "cluster": 6,
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@@ -786,9 +786,9 @@
{
"id": 2773,
"label": "Common Variants",
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- "y": 1.1490,
- "cluster": 4,
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@@ -803,9 +803,9 @@
{
"id": 2791,
"label": "Comparative Genomics",
- "x": 1.1055,
- "y": -0.0723,
- "cluster": 2,
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+ "y": 0.6762,
+ "cluster": 4,
"weights": {
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@@ -820,9 +820,9 @@
{
"id": 2828,
"label": "Complexes",
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- "cluster": 3,
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+ "cluster": 1,
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@@ -837,9 +837,9 @@
{
"id": 2829,
"label": "Complexity",
- "x": 1.1074,
- "y": -0.4826,
- "cluster": 6,
+ "x": 0.6533,
+ "y": -0.8720,
+ "cluster": 7,
"weights": {
"Links": 10.0000,
"Total link strength": 13.0000,
@@ -854,9 +854,9 @@
{
"id": 3102,
"label": "Cryo-Em",
- "x": 0.0483,
- "y": -1.2039,
- "cluster": 3,
+ "x": -0.8222,
+ "y": 0.6621,
+ "cluster": 1,
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"Links": 23.0000,
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@@ -871,9 +871,9 @@
{
"id": 3112,
"label": "Crystal Structure",
- "x": -0.2817,
- "y": -0.6487,
- "cluster": 3,
+ "x": -0.4870,
+ "y": 0.6771,
+ "cluster": 1,
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"Total link strength": 131.0000,
@@ -888,9 +888,9 @@
{
"id": 3166,
"label": "Cyanobacteria",
- "x": 0.9782,
- "y": 0.0174,
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+ "y": -0.1992,
+ "cluster": 4,
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"Total link strength": 19.0000,
@@ -905,9 +905,9 @@
{
"id": 3231,
"label": "Cytokines",
- "x": -0.5085,
- "y": 0.6629,
- "cluster": 4,
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+ "y": 0.1196,
+ "cluster": 3,
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@@ -922,9 +922,9 @@
{
"id": 3300,
"label": "Database",
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- "y": -0.0013,
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@@ -939,9 +939,9 @@
{
"id": 3390,
"label": "Deletion",
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+ "y": 0.9633,
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"Total link strength": 37.0000,
@@ -956,9 +956,9 @@
{
"id": 3414,
"label": "Dendritic Cells",
- "x": -0.7737,
- "y": -0.1472,
- "cluster": 1,
+ "x": -0.4488,
+ "y": 0.8028,
+ "cluster": 2,
"weights": {
"Links": 32.0000,
"Total link strength": 44.0000,
@@ -973,12 +973,12 @@
{
"id": 3510,
"label": "Diabetes",
- "x": 0.0378,
- "y": 0.5625,
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+ "x": 0.4846,
+ "y": -0.1394,
+ "cluster": 3,
"weights": {
"Links": 33.0000,
- "Total link strength": 52.0000,
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"Occurrences": 21.0000
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"scores": {
@@ -990,9 +990,9 @@
{
"id": 3520,
"label": "Diagnosis",
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- "y": -0.0350,
- "cluster": 5,
+ "x": -0.3067,
+ "y": -0.1598,
+ "cluster": 6,
"weights": {
"Links": 50.0000,
"Total link strength": 83.0000,
@@ -1007,8 +1007,8 @@
{
"id": 3525,
"label": "Diagnostics",
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- "y": -0.7410,
+ "x": -0.5167,
+ "y": -0.7914,
"cluster": 5,
"weights": {
"Links": 24.0000,
@@ -1024,12 +1024,12 @@
{
"id": 3631,
"label": "Disease",
- "x": 0.1454,
- "y": 0.4917,
- "cluster": 4,
+ "x": 0.4384,
+ "y": -0.0085,
+ "cluster": 3,
"weights": {
- "Links": 127.0000,
- "Total link strength": 336.0000,
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+ "Total link strength": 339.0000,
"Occurrences": 107.0000
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"scores": {
@@ -1041,9 +1041,9 @@
{
"id": 3690,
"label": "Diversity",
- "x": 0.5640,
- "y": -0.2855,
- "cluster": 2,
+ "x": 0.6110,
+ "y": -0.1482,
+ "cluster": 4,
"weights": {
"Links": 80.0000,
"Total link strength": 172.0000,
@@ -1058,9 +1058,9 @@
{
"id": 3701,
"label": "DNA",
- "x": 0.1129,
- "y": -0.5392,
- "cluster": 2,
+ "x": 0.1099,
+ "y": -0.2306,
+ "cluster": 4,
"weights": {
"Links": 71.0000,
"Total link strength": 114.0000,
@@ -1075,9 +1075,9 @@
{
"id": 3710,
"label": "DNA Damage",
- "x": 0.3229,
- "y": -0.3267,
- "cluster": 3,
+ "x": -0.8727,
+ "y": -0.3740,
+ "cluster": 1,
"weights": {
"Links": 47.0000,
"Total link strength": 79.0000,
@@ -1092,12 +1092,12 @@
{
"id": 3723,
"label": "DNA Methylation",
- "x": 0.0169,
- "y": 0.6870,
- "cluster": 4,
+ "x": 0.1786,
+ "y": 0.2127,
+ "cluster": 3,
"weights": {
- "Links": 74.0000,
- "Total link strength": 144.0000,
+ "Links": 75.0000,
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"Occurrences": 47.0000
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"scores": {
@@ -1109,9 +1109,9 @@
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@@ -1908,9 +1908,9 @@
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@@ -1942,9 +1942,9 @@
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{
"id": 6717,
"label": "Insulin",
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{
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"label": "Intellectual Disability",
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"id": 7058,
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"label": "Leukemia",
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"id": 7321,
"label": "Ligands",
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"id": 7379,
"label": "Lipid Metabolism",
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"label": "Liver",
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"id": 7574,
"label": "Lymphocytes",
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"id": 7616,
"label": "Macrophages",
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@@ -3249,10 +3249,10 @@
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diff --git a/data/fellows_keywords.json b/data/fellows_keywords.json
index b59713d..cfdb5d0 100644
--- a/data/fellows_keywords.json
+++ b/data/fellows_keywords.json
@@ -1,351 +1,453 @@
-{
+{
"network": {
"items": [
{
- "id": 64,
+ "id": 85,
"label": "Adipose Tissue",
- "x": -0.8184,
- "y": 0.7295,
+ "x": -0.9540,
+ "y": -0.0772,
"cluster": 4,
"weights": {
- "Links": 8.0000,
- "Total link strength": 12.0000,
- "Occurrences": 5.0000
+ "Links": 13.0000,
+ "Total link strength": 20.0000,
+ "Occurrences": 7.0000
},
"scores": {
- "Avg. norm. citations": 1.1388,
- "Avg. pub. year": 2018.4000,
- "Avg. citations": 2.4100
+ "Avg. pub. year": 2018.8571,
+ "MNCS": 2.1129,
+ "Avg. norm. citations": 1.0356
}
},
{
- "id": 101,
- "label": "Alzheimers Disease",
- "x": -0.5745,
- "y": 0.6584,
- "cluster": 2,
+ "id": 109,
+ "label": "Alcohol",
+ "x": -0.9482,
+ "y": -0.4131,
+ "cluster": 6,
"weights": {
- "Links": 13.0000,
+ "Links": 8.0000,
"Total link strength": 16.0000,
"Occurrences": 7.0000
},
"scores": {
- "Avg. norm. citations": 0.4141,
- "Avg. pub. year": 2018.5714,
- "Avg. citations": 0.7871
+ "Avg. pub. year": 2018.2857,
+ "MNCS": 0.6100,
+ "Avg. norm. citations": 0.3413
}
},
{
- "id": 191,
- "label": "Association",
- "x": -0.1811,
- "y": 0.4779,
- "cluster": 4,
+ "id": 137,
+ "label": "Alzheimers Disease",
+ "x": -0.0207,
+ "y": -0.6560,
+ "cluster": 3,
"weights": {
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- "Total link strength": 10.0000,
- "Occurrences": 7.0000
+ "Links": 20.0000,
+ "Total link strength": 35.0000,
+ "Occurrences": 14.0000
},
"scores": {
- "Avg. norm. citations": 0.9847,
- "Avg. pub. year": 2019.0000,
- "Avg. citations": 1.8829
+ "Avg. pub. year": 2018.7143,
+ "MNCS": 0.9836,
+ "Avg. norm. citations": 0.4631
}
},
{
- "id": 214,
+ "id": 281,
"label": "Bacterial Communities",
- "x": 0.1850,
- "y": -0.4654,
- "cluster": 3,
+ "x": -0.1984,
+ "y": 0.8867,
+ "cluster": 2,
"weights": {
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- "Total link strength": 18.0000,
- "Occurrences": 12.0000
+ "Links": 21.0000,
+ "Total link strength": 32.0000,
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},
"scores": {
- "Avg. norm. citations": 0.7546,
- "Avg. pub. year": 2018.9167,
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diff --git a/data/infrastructure_keywords.json b/data/infrastructure_keywords.json
index c16df3f..feecd1d 100644
--- a/data/infrastructure_keywords.json
+++ b/data/infrastructure_keywords.json
@@ -1,18885 +1,25217 @@
-{
+{
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{
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diff --git a/index.html b/index.html
index cb6b1d1..816d880 100644
--- a/index.html
+++ b/index.html
@@ -56,8 +56,8 @@
Plots list: