R[write to console]: Error: protect(): protection stack overflow R[write to console]: Error: no more error handlers available (recursive errors?); invoking 'abort' restart Number of significantly discriminative features: 22566 ( 29309 ) before internal wilcoxon Traceback (most recent call last): File "/usr/local/miniconda/bin/lefse_run.py", line 10, in sys.exit(lefse_run()) File "/usr/local/miniconda/lib/python3.9/site-packages/lefse/lefse_run.py", line 90, in lefse_run if params['rank_tec'] == 'lda': lda_res,lda_res_th = test_lda_r(cls,feats,class_sl,params['n_boots'],params['f_boots'],params['lda_abs_th'],0.0000000001,params['nlogs']) File "/usr/local/miniconda/lib/python3.9/site-packages/lefse/lefse.py", line 207, in test_lda_r z = robjects.r('z <- suppressWarnings(lda(as.formula('+f+'),data=sub_d,tol='+str(tol_min)+'))') File "/usr/local/miniconda/lib/python3.9/site-packages/rpy2/robjects/__init__.py", line 459, in __call__ res = self.eval(p) File "/usr/local/miniconda/lib/python3.9/site-packages/rpy2/robjects/functions.py", line 204, in __call__ return (super(SignatureTranslatedFunction, self) File "/usr/local/miniconda/lib/python3.9/site-packages/rpy2/robjects/functions.py", line 127, in __call__ res = super(Function, self).__call__(*new_args, **new_kwargs) File "/usr/local/miniconda/lib/python3.9/site-packages/rpy2/rinterface_lib/conversion.py", line 45, in _ cdata = function(*args, **kwargs) File "/usr/local/miniconda/lib/python3.9/site-packages/rpy2/rinterface.py", line 815, in __call__ raise embedded.RRuntimeError(_rinterface._geterrmessage()) rpy2.rinterface_lib.embedded.RRuntimeError: Error: protect(): protection stack overflow