diff --git a/Dockerfile b/Dockerfile old mode 100755 new mode 100644 diff --git a/pom.xml b/pom.xml index 4e26b10..b207da3 100644 --- a/pom.xml +++ b/pom.xml @@ -3,7 +3,7 @@ de.unirostock.sems BiVeS-WebApp war - 1.6.6 + 1.7.0 BiVeS-WebApp http://sems.uni-rostock.de/projects/bives/ @@ -20,7 +20,7 @@ de.unirostock.sems BiVeS - 1.9.2 + 1.10.0 de.binfalse diff --git a/src/main/java/de/unirostock/sems/bives/webservice/WebQueryExecuter.java b/src/main/java/de/unirostock/sems/bives/webservice/WebQueryExecuter.java index c48b371..a0070b1 100644 --- a/src/main/java/de/unirostock/sems/bives/webservice/WebQueryExecuter.java +++ b/src/main/java/de/unirostock/sems/bives/webservice/WebQueryExecuter.java @@ -61,6 +61,7 @@ public WebQueryExecuter () // we don't want to use local files. FileRetriever.FIND_LOCAL = false; exe = new Executer (); + LOGGER.setLevel(LOGGER.INFO); } @@ -213,6 +214,7 @@ else if ( o.getLongOpt ().equals (Executer.REQ_WANT_REACTIONS_DOT2) || o.getLongOpt ().equals (Executer.REQ_WANT_REACTIONS_GRAPHML2) || o.getLongOpt ().equals (Executer.REQ_WANT_REACTIONS_JSON2) || + o.getLongOpt ().equals (Executer.REQ_WANT_REACTIONS_SBGN_JSON) || o.getLongOpt ().equals (Executer.REQ_WANT_COMP_HIERARCHY_DOT) || o.getLongOpt ().equals (Executer.REQ_WANT_COMP_HIERARCHY_GRAPHML) || o.getLongOpt ().equals (Executer.REQ_WANT_COMP_HIERARCHY_JSON) ||