Code for each predictor from recount2 using phenopredict to build phenotype
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Prediction_Summaries.Rmd
Prediction_Summaries.html
README.md
Summaries.Rmd
Summaries.html
phenopredict-Age.Rmd
phenopredict-Age.html
phenopredict-BMI.Rmd
phenopredict-BMI.html
phenopredict-Height.Rmd
phenopredict-Height.html
phenopredict-SampleSource.Rmd
phenopredict-SampleSource.html
phenopredict-SequencingStrategy.Rmd
phenopredict-SequencingStrategy.html
phenopredict-Sex.Rmd
phenopredict-Sex.html
phenopredict-Tissue.Rmd
phenopredict-Tissue.html

README.md

phenopredict_phenotypes

Code for each predictor from recount2 using phenopredict to build phenotype

Predictors currently included:

  • Sex
  • Tissue
  • Sample source (cell line or tissue)
  • Sequencing Strategy (single or paired end)

Have summary plots (one per predictor)

  • Prediction_Summaries